FFCP PHASE1:Hg19::chr9:119163686..119163705,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:119163686..119163705,+
|short_description=p10@PAPPA
|description=CAGE_peak_10_at_PAPPA_5end
|association_with_transcript=107bp_to_AY302185_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5069 | |EntrezGene=5069 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=8602 | |HGNC=8602 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z613 | |UniProt=Q7Z613 | ||
|association_with_transcript=107bp_to_AY302185_5end | |||
|cluster_id=chr9:119163686..119163705,+ | |||
|coexpression_cluster_id=C776 | |||
|description=CAGE_peak_10_at_PAPPA_5end | |||
|id=chr9:119163686..119163705,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.96e-32!180;CL:0000680!5.39e-21!57;CL:0000056!5.39e-21!57;CL:0000355!5.39e-21!57;CL:0000057!1.81e-20!75;CL:0000187!4.14e-20!54;CL:0000192!7.52e-20!42;CL:0000514!7.52e-20!42;CL:0000359!1.07e-19!32;CL:0000393!2.88e-17!60;CL:0000211!2.88e-17!60;CL:0000183!5.05e-17!59;CL:0000048!4.98e-11!430;CL:0000723!1.21e-10!436;CL:0000034!5.64e-10!444;CL:0002539!1.25e-09!10;CL:0000144!1.82e-09!625;CL:0000222!4.05e-09!119;CL:0002334!1.74e-08!12;CL:0002494!2.78e-08!16;CL:0000548!2.87e-08!679;CL:0000004!2.87e-08!679;CL:0000255!2.87e-08!679;CL:0002371!5.14e-08!591;CL:0000012!5.82e-08!682;CL:0002620!4.91e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.46e-22;32!CL:0000192;5.78e-17;43!CL:0002539;6.46e-13;10!CL:0002494;3.78e-12;16!CL:0002334;1.03e-11;12!CL:0002548;2.55e-09;6!CL:0000187;2.75e-09;55!CL:0000134;1.42e-08;55!CL:0002595;1.30e-07;5!CL:0000393;2.11e-07;61!CL:0000211;2.11e-07;61!CL:0000569;3.60e-07;4!CL:1000306;6.33e-07;4!CL:0002547;6.33e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,6.38e-24,32;CL:0000192,6.49e-24,43;CL:0000514,6.49e-24,43;CL:0000187,4.92e-18,55;CL:0000680,1.26e-16,58;CL:0000056,1.26e-16,58;CL:0000355,1.26e-16,58;CL:0000393,2.32e-15,61;CL:0000211,2.32e-15,61;CL:0000057,1.06e-13,76;CL:0002539,6.72e-13,10;CL:0000048,2.61e-12,427;CL:0002494,3.29e-12,16;CL:0000723,8.69e-12,433;CL:0002334,9.92e-12,12;CL:0000034,4.07e-11,441;CL:0002548,1.87e-09,6;CL:0002595,2.89e-07,5;CL:0000222,5.27e-07,121;CL:0000569,5.36e-07,4;CL:0000011,5.36e-07,4;CL:1000306,8.18e-07,4;CL:0002547,8.18e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000514;5.78e-17;43!CL:0000355;2.65e-08;58!CL:0000011;3.60e-07;4 | |||
|ontology_enrichment_disease=DOID:2394!2.41e-11!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.62e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.78e-12,14 | |||
|ontology_enrichment_uberon=UBERON:0001134!1.74e-18!61;UBERON:0002036!1.74e-18!61;UBERON:0003082!1.74e-18!61;UBERON:0002385!2.31e-17!63;UBERON:0001015!2.31e-17!63;UBERON:0000383!2.31e-17!63;UBERON:0000914!9.31e-16!83;UBERON:0002329!9.31e-16!83;UBERON:0003077!9.31e-16!83;UBERON:0003059!9.31e-16!83;UBERON:0007282!9.31e-16!83;UBERON:0009618!9.31e-16!83;UBERON:0007285!9.31e-16!83;UBERON:0004290!1.35e-15!70;UBERON:0004872!9.80e-14!84;UBERON:0001637!2.67e-13!42;UBERON:0003509!2.67e-13!42;UBERON:0004572!2.67e-13!42;UBERON:0000486!6.92e-13!82;UBERON:0004573!1.03e-12!33;UBERON:0004571!1.03e-12!33;UBERON:0005256!4.91e-10!143;UBERON:0004237!1.25e-09!10;UBERON:0004695!1.25e-09!10;UBERON:0002111!1.25e-09!10;UBERON:0004178!1.25e-09!10;UBERON:0001135!2.16e-09!15;UBERON:0004535!4.06e-09!110;UBERON:0000490!5.84e-09!138;UBERON:0001981!6.24e-09!60;UBERON:0007500!6.24e-09!60;UBERON:0004537!6.24e-09!60;UBERON:0006965!6.24e-09!60;UBERON:0002049!6.25e-09!79;UBERON:0007798!6.25e-09!79;UBERON:0003914!6.95e-09!118;UBERON:0001009!1.86e-08!113;UBERON:0002100!1.71e-07!216;UBERON:0000992!3.79e-07!13;UBERON:0000947!9.74e-07!21;UBERON:0010191!9.74e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.15e-18;33!UBERON:0004571;2.15e-18;33!UBERON:0001637;1.06e-13;42!UBERON:0003509;1.06e-13;42!UBERON:0004572;1.06e-13;42!UBERON:0001135;1.98e-13;15!UBERON:0004237;6.46e-13;10!UBERON:0004695;6.46e-13;10!UBERON:0002111;6.46e-13;10!UBERON:0004178;6.46e-13;10!UBERON:0000947;7.33e-11;21!UBERON:0010191;7.33e-11;21!UBERON:0007500;6.82e-09;56!UBERON:0001981;6.82e-09;56!UBERON:0004537;6.82e-09;56!UBERON:0000992;9.03e-09;13!UBERON:0000948;5.45e-08;22!UBERON:0002118;6.39e-08;5!UBERON:0003834;1.30e-07;5!UBERON:0001533;1.30e-07;5!UBERON:0004797;6.33e-07;4!UBERON:0000415;6.33e-07;4!UBERON:0007240;6.33e-07;4!UBERON:0005742;6.33e-07;4!UBERON:0005734;6.33e-07;4!UBERON:0004664;6.33e-07;4!UBERON:0004663;6.33e-07;4!UBERON:0002049;8.45e-07;75!UBERON:0007798;8.45e-07;75 | |||
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| ||
|short_description=p10@PAPPA | |||
}} | }} |
Latest revision as of 18:20, 24 September 2015
Short description: | p10@PAPPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_PAPPA_5end |
Coexpression cluster: | C776_chorionic_placenta_Smooth_Aortic_Fibroblast_leiomyoma_mesothelioma |
Association with transcript: | 107bp_to_AY302185_5end |
EntrezGene: | PAPPA |
HGNC: | 8602 |
UniProt: | Q7Z613 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 6.38e-24 | 32 |
smooth muscle cell | 6.49e-24 | 43 |
smooth muscle myoblast | 6.49e-24 | 43 |
muscle cell | 4.92e-18 | 55 |
muscle precursor cell | 1.26e-16 | 58 |
myoblast | 1.26e-16 | 58 |
multi-potent skeletal muscle stem cell | 1.26e-16 | 58 |
electrically responsive cell | 2.32e-15 | 61 |
electrically active cell | 2.32e-15 | 61 |
fibroblast | 1.06e-13 | 76 |
aortic smooth muscle cell | 6.72e-13 | 10 |
multi fate stem cell | 2.61e-12 | 427 |
cardiocyte | 3.29e-12 | 16 |
somatic stem cell | 8.69e-12 | 433 |
preadipocyte | 9.92e-12 | 12 |
stem cell | 4.07e-11 | 441 |
cardiac fibroblast | 1.87e-09 | 6 |
smooth muscle cell of the subclavian artery | 2.89e-07 | 5 |
mesodermal cell | 5.27e-07 | 121 |
cardiac mesenchymal cell | 5.36e-07 | 4 |
migratory trunk neural crest cell | 5.36e-07 | 4 |
fibroblast of tunica adventitia of artery | 8.18e-07 | 4 |
fibroblast of the aortic adventitia | 8.18e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.78e-12 | 14 |