FFCP PHASE1:Hg19::chr17:41614135..41614151,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2118 | |EntrezGene=2118 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=3493 | |HGNC=3493 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-286bp_to_EU693078_5end | |association_with_transcript=-286bp_to_EU693078_5end | ||
|cluster_id=chr17:41614135..41614151,- | |||
|description=CAGE_peak_20_at_ETV4_5end | |description=CAGE_peak_20_at_ETV4_5end | ||
|id=chr17:41614135..41614151,- | |id=chr17:41614135..41614151,- | ||
|ontology_enrichment_celltype=CL:0000039!1.24e-08!7;CL:0000586!1.24e-08!7 | |ontology_enrichment_celltype=CL:0000039!1.24e-08!7;CL:0000586!1.24e-08!7 | ||
|ontology_enrichment_celltype_v019=CL:0002550;2.21e-40;1!CL:0000039;1.36e-23;7!CL:0000586;1.36e-23;7!CL:0000317;5.69e-21;2!CL:1000448;5.69e-21;2!CL:0002308;5.69e-21;2!CL:0002140;5.69e-21;2!CL:0002577;1.31e-14;3!CL:0000622;3.22e-09;5!CL:0000154;6.78e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002550,2.21e-40,1;CL:0000039,1.14e-23,7;CL:0000586,1.14e-23,7;CL:0000317,6.96e-21,2;CL:1000448,6.96e-21,2;CL:0002308,6.96e-21,2;CL:0002140,6.96e-21,2;CL:0002577,1.40e-14,3;CL:0000622,3.49e-09,5;CL:0000154,7.25e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3095!4.87e-07!22;DOID:2994!4.87e-07!22;DOID:0050687!6.67e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:3095;3.09e-08;22!DOID:2994;3.09e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.93e-08,22;DOID:2994,2.93e-08,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;5.69e-21;2!UBERON:0007771;5.69e-21;2!UBERON:0003297;5.69e-21;2!UBERON:0001821;5.69e-21;2!UBERON:0003487;5.69e-21;2!UBERON:0001820;5.69e-21;2!UBERON:0001987;2.66e-11;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,6.96e-21,2;UBERON:0007771,6.96e-21,2;UBERON:0003297,6.96e-21,2;UBERON:0001821,6.96e-21,2;UBERON:0003487,6.96e-21,2;UBERON:0001820,6.96e-21,2;UBERON:0005089,6.96e-21,2;UBERON:0005088,6.96e-21,2;UBERON:0001987,2.80e-11,4;UBERON:0004340,2.80e-11,4;UBERON:0003124,5.38e-07,7 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17160715916898,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0.462942225792648,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253991577168676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,4.5358543999452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,4.84184199214926,0.0897576444097721,1.84700532267414,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0.300646838828985,0.207376382794494,0,0,0,0,0,0.138674673013139,0.173559738335131,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0.124252535565433,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0.781514011233092,0.523813388962845,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0.0918948995348449,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17160715916898,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0.462942225792648,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253991577168676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,4.5358543999452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,4.84184199214926,0.0897576444097721,1.84700532267414,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0.300646838828985,0.207376382794494,0,0,0,0,0,0.138674673013139,0.173559738335131,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0.124252535565433,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0.781514011233092,0.523813388962845,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0.0918948995348449,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p20@ETV4 | |short_description=p20@ETV4 | ||
}} | }} |
Latest revision as of 18:20, 24 September 2015
Short description: | p20@ETV4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_ETV4_5end |
Coexpression cluster: | NA |
Association with transcript: | -286bp_to_EU693078_5end |
EntrezGene: | ETV4 |
HGNC: | 3493 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of the conjuctiva | 2.21e-40 | 1 |
germ line cell | 1.14e-23 | 7 |
germ cell | 1.14e-23 | 7 |
sebum secreting cell | 6.96e-21 | 2 |
epithelial cell of sweat gland | 6.96e-21 | 2 |
epithelial cell of skin gland | 6.96e-21 | 2 |
acinar cell of sebaceous gland | 6.96e-21 | 2 |
placental epithelial cell | 1.40e-14 | 3 |
acinar cell | 3.49e-09 | 5 |
protein secreting cell | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
skin gland | 6.96e-21 | 2 |
epidermis gland | 6.96e-21 | 2 |
gland of integumental system | 6.96e-21 | 2 |
sebaceous gland | 6.96e-21 | 2 |
skin sebaceous gland | 6.96e-21 | 2 |
sweat gland | 6.96e-21 | 2 |
sweat gland placode | 6.96e-21 | 2 |
sebaceous gland placode | 6.96e-21 | 2 |
placenta | 2.80e-11 | 4 |
allantois | 2.80e-11 | 4 |
chorion | 5.38e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.93e-08 | 22 |
germ cell cancer | 2.93e-08 | 22 |