FFCP PHASE1:Hg19::chr12:7261064..7261122,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51279 | |EntrezGene=51279 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21265 | |HGNC=21265 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=74bp_to_ENST00000543941_5end | |association_with_transcript=74bp_to_ENST00000543941_5end | ||
|cluster_id=chr12:7261064..7261122,- | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_2_at_C1RL_5end | |description=CAGE_peak_2_at_C1RL_5end | ||
|id=chr12:7261064..7261122,- | |id=chr12:7261064..7261122,- | ||
|ontology_enrichment_celltype=CL:0000791!4.54e-12!18;CL:0000789!4.54e-12!18;CL:0002420!4.54e-12!18;CL:0002419!4.54e-12!18;CL:0000790!4.54e-12!18;CL:0000084!9.84e-11!25;CL:0000827!9.84e-11!25;CL:0000838!2.15e-09!52;CL:0000542!4.99e-09!53;CL:0000051!4.99e-09!53;CL:0000625!4.76e-08!11 | |ontology_enrichment_celltype=CL:0000791!4.54e-12!18;CL:0000789!4.54e-12!18;CL:0002420!4.54e-12!18;CL:0002419!4.54e-12!18;CL:0000790!4.54e-12!18;CL:0000084!9.84e-11!25;CL:0000827!9.84e-11!25;CL:0000838!2.15e-09!52;CL:0000542!4.99e-09!53;CL:0000051!4.99e-09!53;CL:0000625!4.76e-08!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;5.37e-13;18!CL:0000789;5.37e-13;18!CL:0002419;5.37e-13;18!CL:0000084;3.81e-11;25!CL:0000625;1.30e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,9.91e-13,18;CL:0000789,9.91e-13,18;CL:0002420,9.91e-13,18;CL:0002419,9.91e-13,18;CL:0000790,9.91e-13,18;CL:0000084,3.25e-11,25;CL:0000827,3.25e-11,25;CL:0000838,8.47e-10,52;CL:0000542,2.97e-09,53;CL:0000051,2.97e-09,53;CL:0000625,1.85e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000790;5.37e-13;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!4.50e-08!169;UBERON:0000925!4.50e-08!169;UBERON:0006595!4.50e-08!169;UBERON:0000178!3.87e-07!15;UBERON:0000179!3.87e-07!15;UBERON:0000463!3.87e-07!15;UBERON:0001007!6.14e-07!155;UBERON:0001555!6.14e-07!155;UBERON:0007026!6.14e-07!155 | |ontology_enrichment_uberon=UBERON:0004119!4.50e-08!169;UBERON:0000925!4.50e-08!169;UBERON:0006595!4.50e-08!169;UBERON:0000178!3.87e-07!15;UBERON:0000179!3.87e-07!15;UBERON:0000463!3.87e-07!15;UBERON:0001007!6.14e-07!155;UBERON:0001555!6.14e-07!155;UBERON:0007026!6.14e-07!155 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.83e-08;15!UBERON:0000179;9.83e-08;15!UBERON:0000463;9.83e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.72e-07,15;UBERON:0000179,1.72e-07,15;UBERON:0000463,1.72e-07,15;UBERON:0004119,3.69e-07,160;UBERON:0000925,3.69e-07,160;UBERON:0006595,3.69e-07,160 | |||
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| ||
|short_description=p2@C1RL | |short_description=p2@C1RL | ||
}} | }} |
Latest revision as of 18:18, 24 September 2015
Short description: | p2@C1RL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C1RL_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 74bp_to_ENST00000543941_5end |
EntrezGene: | C1RL |
HGNC: | 21265 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 9.91e-13 | 18 |
alpha-beta T cell | 9.91e-13 | 18 |
immature T cell | 9.91e-13 | 18 |
mature T cell | 9.91e-13 | 18 |
immature alpha-beta T cell | 9.91e-13 | 18 |
T cell | 3.25e-11 | 25 |
pro-T cell | 3.25e-11 | 25 |
lymphoid lineage restricted progenitor cell | 8.47e-10 | 52 |
lymphocyte | 2.97e-09 | 53 |
common lymphoid progenitor | 2.97e-09 | 53 |
CD8-positive, alpha-beta T cell | 1.85e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
blood | 1.72e-07 | 15 |
haemolymphatic fluid | 1.72e-07 | 15 |
organism substance | 1.72e-07 | 15 |
endoderm-derived structure | 3.69e-07 | 160 |
endoderm | 3.69e-07 | 160 |
presumptive endoderm | 3.69e-07 | 160 |