FFCP PHASE1:Hg19::chr12:7260968..7260978,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:7260968..7260978,-
|short_description=p5@C1RL
|description=CAGE_peak_5_at_C1RL_5end
|association_with_transcript=-69bp_to_ENST00000537833_5end
|EntrezGen...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51279 | |EntrezGene=51279 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21265 | |HGNC=21265 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-69bp_to_ENST00000537833_5end | |||
|cluster_id=chr12:7260968..7260978,- | |||
|description=CAGE_peak_5_at_C1RL_5end | |||
|id=chr12:7260968..7260978,- | |||
|ontology_enrichment_celltype=CL:0000188!5.65e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0002600;4.94e-15;2!CL:0000594;5.18e-11;3!CL:0000775;2.49e-10;3!CL:0000094;1.24e-08;8!CL:0000188;6.66e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002600,4.95e-15,2;CL:0000594,5.59e-11,3;CL:0000775,2.49e-10,3;CL:0000094,1.21e-08,8;CL:0000188,5.72e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0010226;2.29e-08;1!UBERON:0010115;2.29e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.62e-11!115;UBERON:0007100!5.14e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;1.47e-10;3!UBERON:0007100;6.08e-10;25!UBERON:0000996;6.25e-09;1!UBERON:0002134;1.02e-08;1!UBERON:0005208;1.02e-08;1!UBERON:0004145;1.02e-08;1!UBERON:0005946;1.02e-08;1!UBERON:0005965;1.02e-08;1!UBERON:0002078;1.02e-08;1!UBERON:0002363;2.29e-08;1!UBERON:0002084;2.29e-08;1!UBERON:0007195;2.29e-08;1!UBERON:0002082;2.29e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,1.00e-10,3;UBERON:0007100,3.42e-09,27;UBERON:0000996,6.03e-09,1;UBERON:0002134,9.46e-09,1;UBERON:0005208,9.46e-09,1;UBERON:0005946,9.46e-09,1;UBERON:0005965,9.46e-09,1;UBERON:0002078,9.46e-09,1;UBERON:0002084,1.37e-08,1;UBERON:0002082,1.37e-08,1;UBERON:0010226,1.37e-08,1;UBERON:0002363,2.46e-08,1;UBERON:0007645,2.46e-08,1;UBERON:0007647,2.46e-08,1;UBERON:0010115,2.46e-08,1;UBERON:0007195,3.28e-08,1 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,1.78784437770915,0,0,0,1.56711376919903,0,0,0,0,0.618831764800233,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.25618263945135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0.144824403882799,2.43806866313962,0.670700859703636,0.255725123687061,0,1.00267582127178,0.144846518960824,0,0.973269740605272,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0.993943903390637,0.12663051166458,0,0.860509862246441,0,0,0,0,1.24484414159907,0,0.326923806226917,0.756787138224657,0.576175924479999,0.468642863667593,0.312160076830321,0,0,0.117434498643765,0,0,0.204154171254893,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.300476117813194,0,0,0,0.211931901159562,0,0,0.257640540045629,0,0,0.0974370051611986,0,0.276149695926898,0.161646056818812,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0.982827216677626,1.77236972004421,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0.383382679165211,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0,0,10.7296933755565,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0.355391948742546,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0,0,0,0,0,0,1.49801404789436,0,1.65766205374414,1.96306386750624,0,0,0,0,0.157702415033935,0,0,0,1.03473071292505,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0.256278298511402,0,0.160853921143607,0,0,0.177561725313127,0.164254312027618,0.519254429183621,0,0.120859449591622,0.200506470303285,0,0.114814448164607,0,0.524497659837696,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0.48335359146061,0.924291702687866,1.99554777143968,0.413509717453592,4.29680979473094,3.33538396002726,0.340906509664404,0.712256285173899,0.165284915360978,0,0.382838137483752,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0.855877976067841,0,0,0.359744915166629,0.54907405947211,0.117812402345686,0,0,0,0,0,0,0,0.424216295861138,0,0,0,0,1.73632660280006,1.31178950409327,0,0,0,0,0.0982490410131212,0,0,0.633322905892992,0.329294892959902,0,0,0,0,0,0.659006605437454,0,0,0,0,0.507447609232169,0,0.569647187174163,0.238231775457789,0.411362273086194,0,0,0,0,0.962479855263359,0,0.185803175125719,0,0.355709216742071,0,0,0.191505370132367,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61158997199083,0,0.111443384277478,0,0,0,0,0,0,0,0,0.211125408127993,0.597743964753209,0,0,0,0,0,0,1.07412704805365,0,0.789147245095469,0,1.11136990144637,0,0,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.153900517007594,0.683652335082007,0,0,0,0,0,0,0,0.156980256395025,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.707660516026713,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,1.51647791108371,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0.34945333648406,0,0,0,0,0.775912131907355,0.441280633457501,0,0,0.19871461170299,0.0633107959558787,0,0.160317640503067,0.213452994739353,0.19980960958213,0,0.114536596165916,0,0,0,0,0.135904206073614,0,0.101998217636322,0,0,0.136905378891993,0,0,0,0.279282401272254,0.458320848023367,2.87149209830726,0.798716001995964,2.14613024068285,2.90122894674434,0.0671834724867263,0,0,0.0787831823072236,0,0,0,0.169346664131569,0,0,0.160753148465019,0,0,0,0,0.0607495566580247,0,0.236417121897595,0.104909176269996,0,0,0,0.714695326373367,1.98627591109629,0,0,0,0,0,0.082092520749339,0,0,0.439656701034247,0,0.129282956361551,0,0,0,0.213574825135389,0.157204305099666,0,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0,0,0,0.1251909307065,0.573409195690071,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0.554805861502613,0,0,0.889811221596536,0.457680136793847,0.302461847526478,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0.244736704506468,0,0,0.219284049578707,0,0,0.168942440653073,0,0,0,0.138258436151731,0.194860308839388,0,0,0,0,0,0,0.320075189082423,0.516644938982447,0,0.736423801007363,0,0.622077260032973,0,0.107824811396682,0,0,0,0,0,0,0,0.0788617450012534,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.752103283492572,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0.336283722218824,0,0.227662191351298,0.0887023701626388,0.230467975111559,0.171488009437418,0,0.0657727735628491,0,0,0.156986185701028,0.157115589916002,0,0,0,0,0.214429632529969,0,0,0,0,0.207216164163037,0,0,0,0.118332000730565,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0.821302454849976,0,0,0,0,0,0.11294608203896,0,0.150962843566674,0,0,0,0.735444965261716,0.471353094203252,0.392616934229891,0,0,0.169927114687817,0.187967835959707,0.0644578879735772,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.833565680400634,0,0,0,0.213233981900981,0.23806443146374,0.129177819672012,0.186224142887574,0,0.636471582781649,0,0.217716747896961,0,0.134704106029175,0.860666464712116,0.99798106963804,0.162806537221949,0,0,0,0,0,0,4.66029741929859,0.603821380773079,0 | |phase1_expression=0.181678379270557,0.214100523890983,0,0,1.78784437770915,0,0,0,1.56711376919903,0,0,0,0,0.618831764800233,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.25618263945135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0.144824403882799,2.43806866313962,0.670700859703636,0.255725123687061,0,1.00267582127178,0.144846518960824,0,0.973269740605272,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0.993943903390637,0.12663051166458,0,0.860509862246441,0,0,0,0,1.24484414159907,0,0.326923806226917,0.756787138224657,0.576175924479999,0.468642863667593,0.312160076830321,0,0,0.117434498643765,0,0,0.204154171254893,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.300476117813194,0,0,0,0.211931901159562,0,0,0.257640540045629,0,0,0.0974370051611986,0,0.276149695926898,0.161646056818812,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0.982827216677626,1.77236972004421,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0.383382679165211,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0,0,10.7296933755565,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0.355391948742546,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0,0,0,0,0,0,1.49801404789436,0,1.65766205374414,1.96306386750624,0,0,0,0,0.157702415033935,0,0,0,1.03473071292505,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0.256278298511402,0,0.160853921143607,0,0,0.177561725313127,0.164254312027618,0.519254429183621,0,0.120859449591622,0.200506470303285,0,0.114814448164607,0,0.524497659837696,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0.48335359146061,0.924291702687866,1.99554777143968,0.413509717453592,4.29680979473094,3.33538396002726,0.340906509664404,0.712256285173899,0.165284915360978,0,0.382838137483752,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0.855877976067841,0,0,0.359744915166629,0.54907405947211,0.117812402345686,0,0,0,0,0,0,0,0.424216295861138,0,0,0,0,1.73632660280006,1.31178950409327,0,0,0,0,0.0982490410131212,0,0,0.633322905892992,0.329294892959902,0,0,0,0,0,0.659006605437454,0,0,0,0,0.507447609232169,0,0.569647187174163,0.238231775457789,0.411362273086194,0,0,0,0,0.962479855263359,0,0.185803175125719,0,0.355709216742071,0,0,0.191505370132367,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61158997199083,0,0.111443384277478,0,0,0,0,0,0,0,0,0.211125408127993,0.597743964753209,0,0,0,0,0,0,1.07412704805365,0,0.789147245095469,0,1.11136990144637,0,0,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.153900517007594,0.683652335082007,0,0,0,0,0,0,0,0.156980256395025,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.707660516026713,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,1.51647791108371,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0.34945333648406,0,0,0,0,0.775912131907355,0.441280633457501,0,0,0.19871461170299,0.0633107959558787,0,0.160317640503067,0.213452994739353,0.19980960958213,0,0.114536596165916,0,0,0,0,0.135904206073614,0,0.101998217636322,0,0,0.136905378891993,0,0,0,0.279282401272254,0.458320848023367,2.87149209830726,0.798716001995964,2.14613024068285,2.90122894674434,0.0671834724867263,0,0,0.0787831823072236,0,0,0,0.169346664131569,0,0,0.160753148465019,0,0,0,0,0.0607495566580247,0,0.236417121897595,0.104909176269996,0,0,0,0.714695326373367,1.98627591109629,0,0,0,0,0,0.082092520749339,0,0,0.439656701034247,0,0.129282956361551,0,0,0,0.213574825135389,0.157204305099666,0,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0,0,0,0.1251909307065,0.573409195690071,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0.554805861502613,0,0,0.889811221596536,0.457680136793847,0.302461847526478,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0.244736704506468,0,0,0.219284049578707,0,0,0.168942440653073,0,0,0,0.138258436151731,0.194860308839388,0,0,0,0,0,0,0.320075189082423,0.516644938982447,0,0.736423801007363,0,0.622077260032973,0,0.107824811396682,0,0,0,0,0,0,0,0.0788617450012534,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.752103283492572,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0.336283722218824,0,0.227662191351298,0.0887023701626388,0.230467975111559,0.171488009437418,0,0.0657727735628491,0,0,0.156986185701028,0.157115589916002,0,0,0,0,0.214429632529969,0,0,0,0,0.207216164163037,0,0,0,0.118332000730565,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0.821302454849976,0,0,0,0,0,0.11294608203896,0,0.150962843566674,0,0,0,0.735444965261716,0.471353094203252,0.392616934229891,0,0,0.169927114687817,0.187967835959707,0.0644578879735772,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.833565680400634,0,0,0,0.213233981900981,0.23806443146374,0.129177819672012,0.186224142887574,0,0.636471582781649,0,0.217716747896961,0,0.134704106029175,0.860666464712116,0.99798106963804,0.162806537221949,0,0,0,0,0,0,4.66029741929859,0.603821380773079,0 | ||
|short_description=p5@C1RL | |||
}} | }} |
Latest revision as of 18:17, 24 September 2015
Short description: | p5@C1RL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_C1RL_5end |
Coexpression cluster: | NA |
Association with transcript: | -69bp_to_ENST00000537833_5end |
EntrezGene: | C1RL |
HGNC: | 21265 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of trachea | 4.95e-15 | 2 |
skeletal muscle satellite cell | 5.59e-11 | 3 |
neutrophil | 2.49e-10 | 3 |
granulocyte | 1.21e-08 | 8 |
cell of skeletal muscle | 5.72e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 1.00e-10 | 3 |
primary circulatory organ | 3.42e-09 | 27 |
vagina | 6.03e-09 | 1 |
tricuspid valve | 9.46e-09 | 1 |
right atrium valve | 9.46e-09 | 1 |
outflow tract of atrium | 9.46e-09 | 1 |
outflow part of right atrium | 9.46e-09 | 1 |
right cardiac atrium | 9.46e-09 | 1 |
heart left ventricle | 1.37e-08 | 1 |
cardiac ventricle | 1.37e-08 | 1 |
future cardiac ventricle | 1.37e-08 | 1 |
dura mater | 2.46e-08 | 1 |
future meninx | 2.46e-08 | 1 |
ectomeninx | 2.46e-08 | 1 |
future dura mater | 2.46e-08 | 1 |
stroma of bone marrow | 3.28e-08 | 1 |