FFCP PHASE1:Hg19::chrX:23802698..23802713,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:23802698..23802713,+ to FFCP PHASE1:Hg19::chrX:23802698..23802713,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6303 | |EntrezGene=6303 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10540 | |HGNC=10540 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-156bp_to_ENST00000474223_5end | |||
|cluster_id=chrX:23802698..23802713,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_2_at_SAT1_5end | |||
|id=chrX:23802698..23802713,+ | |||
|ontology_enrichment_celltype=CL:0000766!3.15e-28!76;CL:0002057!1.60e-27!42;CL:0000738!3.53e-24!140;CL:0000860!4.03e-24!45;CL:0002009!2.07e-23!65;CL:0000557!4.42e-23!71;CL:0002194!6.91e-23!63;CL:0000576!6.91e-23!63;CL:0000040!6.91e-23!63;CL:0000559!6.91e-23!63;CL:0000839!7.64e-23!70;CL:0002031!2.28e-18!124;CL:0002087!2.70e-18!119;CL:0000763!2.30e-14!112;CL:0000049!2.30e-14!112;CL:0000037!1.03e-13!172;CL:0000566!1.03e-13!172;CL:0002032!3.60e-13!165;CL:0000837!3.60e-13!165;CL:0000988!6.99e-11!182;CL:0002393!5.35e-07!9;CL:0002397!5.35e-07!9;CL:0002076!6.12e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.44e-20;33!CL:0002057;4.44e-20;33!CL:0000473;5.02e-19;39!CL:0000234;5.02e-19;39!CL:0000576;1.43e-16;48!CL:0000766;3.66e-14;69!CL:0002087;8.44e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.87e-31,72;CL:0000473,3.05e-30,48;CL:0000234,3.05e-30,48;CL:0000860,1.33e-27,42;CL:0002057,1.33e-27,42;CL:0002009,2.22e-26,61;CL:0000557,6.41e-26,67;CL:0002194,7.08e-26,59;CL:0000576,7.08e-26,59;CL:0000040,7.08e-26,59;CL:0000559,7.08e-26,59;CL:0000738,7.39e-26,136;CL:0000839,1.35e-25,66;CL:0002031,7.29e-20,120;CL:0002087,7.92e-20,115;CL:0000763,1.12e-15,108;CL:0000049,1.12e-15,108;CL:0000037,1.24e-14,168;CL:0002032,4.35e-14,161;CL:0000837,4.35e-14,161;CL:0000988,5.62e-12,177;CL:0002393,5.15e-07,9;CL:0002397,5.15e-07,9;CL:0002076,6.66e-07,42 | |||
|ontology_enrichment_development_v019=CL:0002057;5.76e-20;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.32e-23!102;UBERON:0003061!4.32e-23!102;UBERON:0002193!3.81e-22!112;UBERON:0002371!1.37e-20!80;UBERON:0001474!4.81e-19!86;UBERON:0002405!1.82e-17!115;UBERON:0004765!3.13e-15!101;UBERON:0001434!3.13e-15!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.90e-25,98;UBERON:0003061,3.90e-25,98;UBERON:0002193,7.68e-24,108;UBERON:0002371,6.02e-23,76;UBERON:0001474,4.88e-21,82;UBERON:0002405,5.72e-21,93;UBERON:0004765,7.95e-20,90;UBERON:0001434,1.40e-15,100;UBERON:0003081,6.70e-08,203 | |||
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| ||
|short_description=p2@SAT1 | |||
}} | }} |
Latest revision as of 18:00, 24 September 2015
Short description: | p2@SAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SAT1_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | -156bp_to_ENST00000474223_5end |
EntrezGene: | SAT1 |
HGNC: | 10540 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.87e-31 | 72 |
defensive cell | 3.05e-30 | 48 |
phagocyte | 3.05e-30 | 48 |
classical monocyte | 1.33e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.33e-27 | 42 |
macrophage dendritic cell progenitor | 2.22e-26 | 61 |
granulocyte monocyte progenitor cell | 6.41e-26 | 67 |
monopoietic cell | 7.08e-26 | 59 |
monocyte | 7.08e-26 | 59 |
monoblast | 7.08e-26 | 59 |
promonocyte | 7.08e-26 | 59 |
leukocyte | 7.39e-26 | 136 |
myeloid lineage restricted progenitor cell | 1.35e-25 | 66 |
hematopoietic lineage restricted progenitor cell | 7.29e-20 | 120 |
nongranular leukocyte | 7.92e-20 | 115 |
myeloid cell | 1.12e-15 | 108 |
common myeloid progenitor | 1.12e-15 | 108 |
hematopoietic stem cell | 1.24e-14 | 168 |
hematopoietic oligopotent progenitor cell | 4.35e-14 | 161 |
hematopoietic multipotent progenitor cell | 4.35e-14 | 161 |
hematopoietic cell | 5.62e-12 | 177 |
intermediate monocyte | 5.15e-07 | 9 |
CD14-positive, CD16-positive monocyte | 5.15e-07 | 9 |
endo-epithelial cell | 6.66e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.90e-25 | 98 |
blood island | 3.90e-25 | 98 |
hemolymphoid system | 7.68e-24 | 108 |
bone marrow | 6.02e-23 | 76 |
bone element | 4.88e-21 | 82 |
immune system | 5.72e-21 | 93 |
skeletal element | 7.95e-20 | 90 |
skeletal system | 1.40e-15 | 100 |
lateral plate mesoderm | 6.70e-08 | 203 |