FFCP PHASE1:Hg19::chr19:6693051..6693096,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:6693051..6693096,- to FFCP PHASE1:Hg19::chr19:6693051..6693096,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=718 | |EntrezGene=718 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1318 | |HGNC=1318 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000475508,uc002mfl.2_5end | |||
|cluster_id=chr19:6693051..6693096,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_6_at_C3_5end | |||
|id=chr19:6693051..6693096,- | |||
|ontology_enrichment_celltype=CL:0000181!1.68e-08!12;CL:0000417!1.68e-08!12;CL:0000668!1.68e-08!12;CL:0000414!1.68e-08!12;CL:0000412!1.68e-08!12;CL:0000182!1.68e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.03e-17;12!CL:0000746;1.00e-06;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.79e-17,12;CL:0000746,9.47e-07,3;CL:0000513,9.47e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.39e-18;11!UBERON:0009497;3.01e-15;13!UBERON:0003104;3.25e-14;31!CL:0000513;1.00e-06;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.07e-19!115;UBERON:0004111!6.68e-13!241;UBERON:0000477!3.34e-11!286;UBERON:0000025!1.19e-10!194;UBERON:0007100!6.13e-10!27;UBERON:0000948!1.70e-09!24;UBERON:0005498!1.70e-09!24;UBERON:0004140!1.70e-09!24;UBERON:0009881!1.70e-09!24;UBERON:0004141!1.70e-09!24;UBERON:0003084!1.70e-09!24;UBERON:0007005!1.70e-09!24;UBERON:0004139!1.70e-09!24;UBERON:0004291!1.70e-09!24;UBERON:0002365!3.46e-09!31;UBERON:0002330!3.46e-09!31;UBERON:0002107!5.72e-09!19;UBERON:0006925!5.72e-09!19;UBERON:0008836!5.72e-09!19;UBERON:0009854!7.05e-08!23;UBERON:0000481!8.59e-08!347;UBERON:0009497!1.15e-07!25;UBERON:0000015!1.15e-07!25;UBERON:0002423!1.15e-07!25;UBERON:0006235!1.15e-07!25;UBERON:0004161!1.15e-07!25;UBERON:0008835!3.97e-07!22;UBERON:0003894!3.97e-07!22;UBERON:0000922!5.30e-07!612;UBERON:0003103!5.87e-07!69;UBERON:0000923!5.92e-07!604;UBERON:0005291!5.92e-07!604;UBERON:0006598!5.92e-07!604;UBERON:0002532!5.92e-07!604;UBERON:0003914!6.53e-07!118;UBERON:0002050!7.15e-07!605;UBERON:0005423!7.15e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.84e-17;19!UBERON:0006925;2.84e-17;19!UBERON:0002423;1.27e-15;25!UBERON:0004151;2.27e-13;3!UBERON:0002365;1.02e-11;31!UBERON:0002330;1.02e-11;31!UBERON:0002368;4.31e-10;33!UBERON:0002081;1.24e-09;2!UBERON:0002133;3.51e-09;2!UBERON:0000948;1.67e-08;22!UBERON:0000949;9.10e-08;43!UBERON:0005172;1.52e-07;52!UBERON:0005173;1.52e-07;52!UBERON:0007100;2.27e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.70e-17,19;UBERON:0006925,1.70e-17,19;UBERON:0008836,1.70e-17,19;UBERON:0009854,2.63e-17,23;UBERON:0009497,8.38e-16,25;UBERON:0000015,8.38e-16,25;UBERON:0002423,8.38e-16,25;UBERON:0006235,8.38e-16,25;UBERON:0004161,8.38e-16,25;UBERON:0009856,4.46e-15,26;UBERON:0008835,7.08e-15,22;UBERON:0003894,7.08e-15,22;UBERON:0004151,1.02e-13,3;UBERON:0007499,6.92e-13,25;UBERON:0002417,1.21e-12,60;UBERON:0000916,1.21e-12,60;UBERON:0005172,1.55e-12,54;UBERON:0005173,1.55e-12,54;UBERON:0002365,2.74e-12,31;UBERON:0002330,2.74e-12,31;UBERON:0002368,1.13e-10,35;UBERON:0003914,4.78e-10,117;UBERON:0002081,9.81e-10,2;UBERON:0010227,9.81e-10,2;UBERON:0003104,1.20e-09,160;UBERON:0009142,1.20e-09,160;UBERON:0000949,1.34e-09,45;UBERON:0002133,2.63e-09,2;UBERON:0005177,2.30e-08,101;UBERON:0005256,2.58e-08,122;UBERON:0000948,8.88e-08,24;UBERON:0005498,8.88e-08,24;UBERON:0004140,8.88e-08,24;UBERON:0009881,8.88e-08,24;UBERON:0004141,8.88e-08,24;UBERON:0003084,8.88e-08,24;UBERON:0007005,8.88e-08,24;UBERON:0004139,8.88e-08,24;UBERON:0004291,8.88e-08,24;UBERON:0009569,3.65e-07,112;UBERON:0007100,8.28e-07,27 | |||
|phase1_expression=0,0.428201047781966,0,1.0007329835313,0,0,0,0,0.783556884599516,0,0,0,0,0.123766352960047,0,0,0,0.730310090387373,1.46379839637152,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0.199463657621632,0.426224750532694,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0.112328631146495,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,1.34140171940727,0.511450247374121,0,0,0.869079113764942,0.795285947051099,0.486634870302636,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0,0,0.560677600142307,1.06748995729705,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.247266929278557,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0.484938170456436,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0.464367928031979,0,0,0.168584690078102,0,0.441175890929576,0.217879444092406,0.237270619111097,0,0,0,0.738155454624648,0,0,0,97.6013768128098,44.2272247504932,15.3605375737165,0,0.122988438543114,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0.246217006087397,0.234004265139238,0.148631162288728,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,1.80863626235752,0,3.499054691372,0,0.502257091432126,4.21667878966063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0.153461973288062,0.561320188866147,0,0,0,0,0,0,0,0,0,0.241718899183244,0.802025881213139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09123034943167,0,0,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0.290033387828457,0,0,0.330569830721956,0.192190067365106,0.127612712494584,0.2023155617111,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0,0,0.42793898803392,0,0,0,0.274537029736055,0,0,0,0.421258456238981,0,0.487426979262569,0,0,0.282810863907425,0,0,1.99031692572366,0.438450885253763,0,0,0,0,0,0,0,0,0,0.844430541190656,1.31717957183961,0,0,0.0962221127255121,0,0,3.38917682796405,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0.994147647766298,0,0.111308705022906,0,0,0.597743964753209,1.10513566212459,0,0,0,0,0,0,0,1.08507746200627,0,0,0,0.371072392647405,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.230850775511391,2.39278317278703,0,0.0897576444097721,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0.632994193584081,1.95879369790977,0,0,0,0.0884575645033392,0,0,0,0,0.337005664903385,2.40773294189637,0.234264445725339,0,0,0,0.394584402849391,1.20990716048664,0,0.821425535170343,0,0,0,0,0,0,0,0,0,0,0,2.44617335538842,0,0.387025325156341,0.292357268344742,0.246346371159628,0.678923115418936,0,0.451961481561065,0,0.596143835108969,0.0633107959558787,0,0.0801588202515337,1.28071796843612,0,0,0,0,0.432164393964449,0,0.235694034616795,0,0,0,0,0,1.09524303113594,0,0,0,1.39641200636127,0.229160424011684,1.43574604915363,0.199679000498991,0,0.446342914883745,0.268733889946905,0.360299883542404,0,1.49688046383725,1.483485450861,1.75249214020881,0.0984274815147488,0,0,0.681017030557878,0,0,0,0,0,0.0607495566580247,0,1.02447419488958,0.0524545881349981,0,0,0,3.57347663186684,1.98627591109629,0,0,0,0,0,0,0,0.113312091520126,14.3621189004521,3.97520666736664,0.258565912723101,0.52893040697076,0,0,0.427149650270779,0.628817220398664,0,0,0,0,0,0,0,0.306345576763462,0.327872630709804,0,0,0.244052529803926,0.250381861413,0.573409195690071,0.332787154610557,0.310482014706917,0.415045904808692,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0.302461847526478,0.15543720058278,0.887130899937803,0.318593534327405,0.449803112163605,0.310525913752519,0,0,0,1.20206087197775,2.66563648518157,0.406870733204662,0,0.537052785212442,0,0.796191777397232,0,0,0,0,0,1.07220795687463,1.04397716786085,0.226705925512272,0,0.489473409012935,0,2.16161013012681,0.438568099157414,0,0.578742114812744,0.506827321959218,0.256241518587947,0,0,0.138258436151731,0,0,0,0,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.478901577171454,0.41023272848151,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.752103283492572,0,2.34454203369928,0,0.327543835020193,0,0.135075169236789,0,0,0.0634158101939068,0,0.548257766857182,1.48863353516788,0,1.91643641459393,0,0,0,0,0,0,0.514464028312255,0.135939465953663,0.0657727735628491,0,0,0.235479278551542,0,0,0,0,1.43325506366115,0.0714765441766563,0,0,0,0,1.03608082081518,0.17071847709395,0.691259661814092,0.430227358820278,0.236664001461131,0,0.846774100381858,0.22910686854405,1.24082554265728,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0.490296643507811,0,0.196308467114945,0.891139200981258,0,0,0,0,0,0.357107877211315,0,0,0,0.458729283404541,0.143339583151451,0,0.0679914901909147,0,0.5290268405154,2.23197010900051,0,0.865253124247578,0,0,0,0,0,0,0,1.13668047327359,0,0,0.20686599172379,0.213233981900981,0,0,0,0,0.0636471582781649,0,0.653150243690884,0,0.26940821205835,0.860666464712116,0,0.162806537221949,0.106727345877715,0,0,0,0.122241444182866,0,0,0.603821380773079,0 | |phase1_expression=0,0.428201047781966,0,1.0007329835313,0,0,0,0,0.783556884599516,0,0,0,0,0.123766352960047,0,0,0,0.730310090387373,1.46379839637152,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0.199463657621632,0.426224750532694,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0.112328631146495,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,1.34140171940727,0.511450247374121,0,0,0.869079113764942,0.795285947051099,0.486634870302636,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0,0,0.560677600142307,1.06748995729705,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.247266929278557,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0.484938170456436,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0.464367928031979,0,0,0.168584690078102,0,0.441175890929576,0.217879444092406,0.237270619111097,0,0,0,0.738155454624648,0,0,0,97.6013768128098,44.2272247504932,15.3605375737165,0,0.122988438543114,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0.246217006087397,0.234004265139238,0.148631162288728,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,1.80863626235752,0,3.499054691372,0,0.502257091432126,4.21667878966063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0.153461973288062,0.561320188866147,0,0,0,0,0,0,0,0,0,0.241718899183244,0.802025881213139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09123034943167,0,0,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0.290033387828457,0,0,0.330569830721956,0.192190067365106,0.127612712494584,0.2023155617111,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0,0,0.42793898803392,0,0,0,0.274537029736055,0,0,0,0.421258456238981,0,0.487426979262569,0,0,0.282810863907425,0,0,1.99031692572366,0.438450885253763,0,0,0,0,0,0,0,0,0,0.844430541190656,1.31717957183961,0,0,0.0962221127255121,0,0,3.38917682796405,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0.994147647766298,0,0.111308705022906,0,0,0.597743964753209,1.10513566212459,0,0,0,0,0,0,0,1.08507746200627,0,0,0,0.371072392647405,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.230850775511391,2.39278317278703,0,0.0897576444097721,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0.632994193584081,1.95879369790977,0,0,0,0.0884575645033392,0,0,0,0,0.337005664903385,2.40773294189637,0.234264445725339,0,0,0,0.394584402849391,1.20990716048664,0,0.821425535170343,0,0,0,0,0,0,0,0,0,0,0,2.44617335538842,0,0.387025325156341,0.292357268344742,0.246346371159628,0.678923115418936,0,0.451961481561065,0,0.596143835108969,0.0633107959558787,0,0.0801588202515337,1.28071796843612,0,0,0,0,0.432164393964449,0,0.235694034616795,0,0,0,0,0,1.09524303113594,0,0,0,1.39641200636127,0.229160424011684,1.43574604915363,0.199679000498991,0,0.446342914883745,0.268733889946905,0.360299883542404,0,1.49688046383725,1.483485450861,1.75249214020881,0.0984274815147488,0,0,0.681017030557878,0,0,0,0,0,0.0607495566580247,0,1.02447419488958,0.0524545881349981,0,0,0,3.57347663186684,1.98627591109629,0,0,0,0,0,0,0,0.113312091520126,14.3621189004521,3.97520666736664,0.258565912723101,0.52893040697076,0,0,0.427149650270779,0.628817220398664,0,0,0,0,0,0,0,0.306345576763462,0.327872630709804,0,0,0.244052529803926,0.250381861413,0.573409195690071,0.332787154610557,0.310482014706917,0.415045904808692,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0.302461847526478,0.15543720058278,0.887130899937803,0.318593534327405,0.449803112163605,0.310525913752519,0,0,0,1.20206087197775,2.66563648518157,0.406870733204662,0,0.537052785212442,0,0.796191777397232,0,0,0,0,0,1.07220795687463,1.04397716786085,0.226705925512272,0,0.489473409012935,0,2.16161013012681,0.438568099157414,0,0.578742114812744,0.506827321959218,0.256241518587947,0,0,0.138258436151731,0,0,0,0,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.478901577171454,0.41023272848151,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.752103283492572,0,2.34454203369928,0,0.327543835020193,0,0.135075169236789,0,0,0.0634158101939068,0,0.548257766857182,1.48863353516788,0,1.91643641459393,0,0,0,0,0,0,0.514464028312255,0.135939465953663,0.0657727735628491,0,0,0.235479278551542,0,0,0,0,1.43325506366115,0.0714765441766563,0,0,0,0,1.03608082081518,0.17071847709395,0.691259661814092,0.430227358820278,0.236664001461131,0,0.846774100381858,0.22910686854405,1.24082554265728,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0.490296643507811,0,0.196308467114945,0.891139200981258,0,0,0,0,0,0.357107877211315,0,0,0,0.458729283404541,0.143339583151451,0,0.0679914901909147,0,0.5290268405154,2.23197010900051,0,0.865253124247578,0,0,0,0,0,0,0,1.13668047327359,0,0,0.20686599172379,0.213233981900981,0,0,0,0,0.0636471582781649,0,0.653150243690884,0,0.26940821205835,0.860666464712116,0,0.162806537221949,0.106727345877715,0,0,0,0.122241444182866,0,0,0.603821380773079,0 | ||
|short_description=p6@C3 | |||
}} | }} |
Latest revision as of 17:59, 24 September 2015
Short description: | p6@C3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_C3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000475508, uc002mfl.2_5end |
EntrezGene: | C3 |
HGNC: | 1318 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.79e-17 | 12 |
cardiac muscle cell | 9.47e-07 | 3 |
cardiac muscle myoblast | 9.47e-07 | 3 |