FFCP PHASE1:Hg19::chr12:7242779..7242821,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1246 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=132bp_to_ENST00000543851_5end | |||
|cluster_id=chr12:7242779..7242821,- | |||
|coexpression_cluster_id=C424 | |||
|description=CAGE_peak_9_at_C1R_5end | |||
|id=chr12:7242779..7242821,- | |||
|ontology_enrichment_celltype=CL:0000055!2.73e-12!180;CL:0000057!3.86e-10!75 | |||
|ontology_enrichment_celltype_v019=CL:0000499;4.49e-10;28!CL:0000153;1.31e-09;9!CL:0000447;1.31e-09;9!CL:0000136;1.20e-08;13!CL:0000135;1.31e-08;3!CL:0000388;1.31e-08;3!CL:0000327;4.06e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000499,4.59e-10,28;CL:0000153,1.13e-09,9;CL:0000447,1.13e-09,9;CL:0000136,2.81e-09,15;CL:0000135,1.32e-08,3;CL:0000388,1.32e-08,3;CL:0000327,3.56e-07,15;CL:0000058,9.62e-07,6;CL:0000138,9.62e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!8.31e-09!216;UBERON:0005256!9.18e-09!143;UBERON:0002385!7.87e-08!63;UBERON:0001015!7.87e-08!63;UBERON:0000383!7.87e-08!63;UBERON:0001134!4.06e-07!61;UBERON:0002036!4.06e-07!61;UBERON:0003082!4.06e-07!61;UBERON:0000914!5.67e-07!83;UBERON:0002329!5.67e-07!83;UBERON:0003077!5.67e-07!83;UBERON:0003059!5.67e-07!83;UBERON:0007282!5.67e-07!83;UBERON:0009618!5.67e-07!83;UBERON:0007285!5.67e-07!83;UBERON:0003104!9.57e-07!238;UBERON:0009142!9.57e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;1.31e-08;3!UBERON:0000043;1.31e-08;3!UBERON:0007845;1.31e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.32e-08,3;UBERON:0000043,1.32e-08,3;UBERON:0007845,1.32e-08,3 | |||
|phase1_expression=1.09007027562334,2.5692062866918,0.704772020479856,7.00513088471913,6.25745532198203,6.10636966870258,0,2.52687949370732,4.70134130759709,0,0,0,0,0.618831764800233,0.994192127183747,0.672325146451775,0.602694528023977,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,2.68280343881454,0.767175371061182,1.80719576192283,3.00802746381534,2.02785126545153,0,3.89307896242109,0,0,0,0.130979075497713,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0.993943903390637,0.506522046658319,0.132409180813219,6.59724227722272,1.06400514659507,3.36406560085384,1.06748995729705,0.49333509683432,0,0.134710672069688,0.326923806226917,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0.619954687054593,2.37600571456411,5.68713937340681,0.910161361938026,1.43723628363248,0,0.125118519871964,0,0.438977620880838,0.30648779579902,2.25357088359895,0,0.179389635688862,0.85422955527427,0.211931901159562,0,0.412210116953756,0.515281080091258,0.37223371266318,0.168776332241266,0.292311015483596,1.00973509697646,0.644349290496095,3.55621325001386,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0.928735856063958,0,0.236613600079688,0,0.241011029883482,0.330881918197182,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,29.1536580090211,10.8110993834539,10.6342183202653,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0.381988425558278,0,1.71072446022705,0,0,0,0,0,0,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0.714889968290738,1.08524321078289,0,0,0.710783897485092,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,1.2328579353023,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2269149171914,0,0.271265023699736,1.87173775377726,1.07057393278297,0.788512075169673,1.17141414992713,2.40756879782175,2.27407504055985,4.1389228517002,0,0,1.12948698808508,0.783204629850962,1.02943027143257,0,0,0,0,0,0,0,0,0.841980283299221,0.384417447767103,0.511707249066704,0.482561763430822,1.48418066444991,0.154209693802656,0.532685175939381,0,0.519254429183621,0.116210378459959,0,0,0,0.803701137152247,0.728364672026868,3.2781103739856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95777922130672,0,0,0,0,0,0.580024309752732,0.770243085573222,0.767518373630648,0.275673144969061,0.322260734604821,1.45016693914229,0.0852266274161009,0.356128142586949,0,0.192190067365106,0,0,0,0.94443704049192,0,0.924100740528266,0,0,0.37064843820784,0.143124886741991,0,0,0.953150969619124,0,1.28381696410176,0.95460974377781,0.78494864019923,0.899362287916574,1.64722217841633,0.471249609382746,0,0,0,0,1.94970791705028,0,0.9554993798559,0.848432591722276,1.13008116620243,0,0.66343897524122,0.438450885253763,0.578775534266688,1.9676842561399,0,0,0,0,0,0,0,6.96655196482292,8.56166721695745,0,0.699869440489966,0,0,0,2.16530741786592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0.996239941255349,0.552567831062295,0,0.102268682502155,0,0,0,0,0,0.591860433821602,0,0,0,0,0,0,0,5.07499702804355,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.923403102045565,0.91153644677601,0,0,0,0.31900115973192,0.0915975934018623,1.06606955203727,0,0,0,0,0,0.167821586975843,0,0,0,0,0.141353071433941,0,0,0.796118080530053,0,0,0,0,0,1.60515529459758,0,0,0,0,0.789168805698781,0,0,1.0741718536843,0,0,0,0,0,0,0.284609546029793,0,0,0,0,1.92199335066233,0,0.0967563312890851,0,0,1.16386819786103,0,0.90392296312213,0,0.19871461170299,0,0.391102765469606,0.160317640503067,1.28071796843612,0,0,0,0,0,0.124252535565433,0,0,0.104602846312333,0.305994652908965,0,0,0.273810757783986,0,0,0,0.279282401272254,0.229160424011684,1.43574604915363,0.798716001995964,0,0.223171457441873,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0.236417121897595,0.0524545881349981,0,0.35857467866569,0,3.57347663186684,0.662091970365432,0,0.542999601753713,0.864221491201268,0,0,0,0.851940108927109,0.339936274560377,19.7845515465411,2.65013777824443,0,0.13223260174269,0.171086837884329,0,0.961086713109252,0,1.65695622138878,1.48849806543585,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,2.58792401667989,0,0,0,0.233713309847224,0,0.947015026375446,2.26411111577318,1.77962244319307,0,1.81477108515887,0.15543720058278,0.295710299979268,0,0,0.310525913752519,0,0,0.521745061811734,0.300515217994437,0.380805212168795,0.406870733204662,0.181848659202559,0,0,0.398095888698616,0,1.37358282073117,0.336749488765919,0,0,0,0,0.453411851024545,0,0.97894681802587,0,0,1.53498834705095,0,0,0.168942440653073,0,0,0,0,0,0,0,0.327609848846413,1.47463745252232,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82140754952547,5.8186640697108,0,0,0,0.205116364240755,0,0,0,0,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| |||
|short_description=p9@C1R | |||
}} |
Latest revision as of 17:55, 24 September 2015
Short description: | p9@C1R |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_C1R_5end |
Coexpression cluster: | C424_Hepatocyte_liver_Synoviocyte_tenocyte_Fibroblast_Adipocyte_Cardiac |
Association with transcript: | 132bp_to_ENST00000543851_5end |
EntrezGene: | NA |
HGNC: | 1246 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stromal cell | 4.59e-10 | 28 |
GAG secreting cell | 1.13e-09 | 9 |
carbohydrate secreting cell | 1.13e-09 | 9 |
fat cell | 2.81e-09 | 15 |
fibrocyte | 1.32e-08 | 3 |
tendon cell | 1.32e-08 | 3 |
extracellular matrix secreting cell | 3.56e-07 | 15 |
chondroblast | 9.62e-07 | 6 |
chondrocyte | 9.62e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 1.32e-08 | 3 |
tendon | 1.32e-08 | 3 |
regular connective tissue | 1.32e-08 | 3 |