FFCP PHASE1:Hg19::chr9:118915956..118915981,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5069 | |EntrezGene=5069 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8602 | |HGNC=8602 | ||
|TSSclassifier=strong | |||
|UniProt=Q13219,Q7Z613,Q86YM8,Q8IWT8 | |UniProt=Q13219,Q7Z613,Q86YM8,Q8IWT8 | ||
|association_with_transcript=-89bp_to_NM_002581,uc004bjn.2_5end | |association_with_transcript=-89bp_to_NM_002581,uc004bjn.2_5end | ||
|cluster_id=chr9:118915956..118915981,+ | |||
|coexpression_cluster_id=C34 | |coexpression_cluster_id=C34 | ||
|description=CAGE_peak_8_at_PAPPA_5end | |description=CAGE_peak_8_at_PAPPA_5end | ||
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|ontology_enrichment_celltype=CL:0000055!1.02e-30!180;CL:0000187!2.83e-22!54;CL:0000680!6.03e-22!57;CL:0000056!6.03e-22!57;CL:0000355!6.03e-22!57;CL:0000183!1.91e-21!59;CL:0000057!1.80e-19!75;CL:0000393!6.73e-19!60;CL:0000211!6.73e-19!60;CL:0000192!1.27e-15!42;CL:0000514!1.27e-15!42;CL:0000359!1.81e-15!32;CL:0002620!1.86e-09!23;CL:0002494!2.56e-09!16;CL:0000222!2.25e-08!119;CL:0002539!6.76e-07!10 | |ontology_enrichment_celltype=CL:0000055!1.02e-30!180;CL:0000187!2.83e-22!54;CL:0000680!6.03e-22!57;CL:0000056!6.03e-22!57;CL:0000355!6.03e-22!57;CL:0000183!1.91e-21!59;CL:0000057!1.80e-19!75;CL:0000393!6.73e-19!60;CL:0000211!6.73e-19!60;CL:0000192!1.27e-15!42;CL:0000514!1.27e-15!42;CL:0000359!1.81e-15!32;CL:0002620!1.86e-09!23;CL:0002494!2.56e-09!16;CL:0000222!2.25e-08!119;CL:0002539!6.76e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.72e-18;32!CL:0000187;4.39e-16;55!CL:0000192;9.75e-15;43!CL:0002494;2.88e-14;16!CL:0000393;3.12e-12;61!CL:0000211;3.12e-12;61!CL:0002539;2.79e-11;10!CL:0000569;4.07e-07;4 | |ontology_enrichment_celltype_v019=CL:0000359;3.72e-18;32!CL:0000187;4.39e-16;55!CL:0000192;9.75e-15;43!CL:0002494;2.88e-14;16!CL:0000393;3.12e-12;61!CL:0000211;3.12e-12;61!CL:0002539;2.79e-11;10!CL:0000569;4.07e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000187,3.19e-28,55;CL:0000680,3.77e-26,58;CL:0000056,3.77e-26,58;CL:0000355,3.77e-26,58;CL:0000393,2.74e-24,61;CL:0000211,2.74e-24,61;CL:0000192,1.53e-20,43;CL:0000514,1.53e-20,43;CL:0000359,5.54e-20,32;CL:0002494,9.80e-15,16;CL:0002539,1.05e-11,10;CL:0000222,2.50e-10,121;CL:0000057,5.20e-09,76;CL:0000569,1.79e-07,4;CL:0000011,1.79e-07,4;CL:0000048,2.78e-07,427;CL:0000723,6.72e-07,433 | |||
|ontology_enrichment_development_v019=CL:0000355;3.55e-15;58!CL:0000514;9.75e-15;43!CL:0000011;4.07e-07;4 | |ontology_enrichment_development_v019=CL:0000355;3.55e-15;58!CL:0000514;9.75e-15;43!CL:0000011;4.07e-07;4 | ||
|ontology_enrichment_disease=DOID:2394!2.35e-08!14 | |ontology_enrichment_disease=DOID:2394!2.35e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;4.26e-09;14 | |ontology_enrichment_disease_v019=DOID:2394;4.26e-09;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,3.96e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.35e-19!83;UBERON:0002329!1.35e-19!83;UBERON:0003077!1.35e-19!83;UBERON:0003059!1.35e-19!83;UBERON:0007282!1.35e-19!83;UBERON:0009618!1.35e-19!83;UBERON:0007285!1.35e-19!83;UBERON:0004290!1.64e-19!70;UBERON:0001134!3.16e-19!61;UBERON:0002036!3.16e-19!61;UBERON:0003082!3.16e-19!61;UBERON:0002385!5.18e-18!63;UBERON:0001015!5.18e-18!63;UBERON:0000383!5.18e-18!63;UBERON:0000486!2.13e-17!82;UBERON:0005256!2.78e-12!143;UBERON:0004872!4.48e-12!84;UBERON:0001637!5.07e-11!42;UBERON:0003509!5.07e-11!42;UBERON:0004572!5.07e-11!42;UBERON:0004573!2.00e-10!33;UBERON:0004571!2.00e-10!33;UBERON:0001009!1.80e-09!113;UBERON:0002049!2.05e-09!79;UBERON:0007798!2.05e-09!79;UBERON:0004535!2.09e-09!110;UBERON:0000475!1.39e-08!365;UBERON:0002100!1.83e-08!216;UBERON:0002200!2.27e-08!11;UBERON:0006876!2.27e-08!11;UBERON:0003914!1.17e-07!118;UBERON:0000490!1.38e-07!138;UBERON:0001981!2.65e-07!60;UBERON:0007500!2.65e-07!60;UBERON:0004537!2.65e-07!60;UBERON:0006965!2.65e-07!60;UBERON:0002199!5.50e-07!45;UBERON:0002416!5.50e-07!45;UBERON:0001135!5.54e-07!15;UBERON:0004237!6.76e-07!10;UBERON:0004695!6.76e-07!10;UBERON:0002111!6.76e-07!10;UBERON:0004178!6.76e-07!10 | |ontology_enrichment_uberon=UBERON:0000914!1.35e-19!83;UBERON:0002329!1.35e-19!83;UBERON:0003077!1.35e-19!83;UBERON:0003059!1.35e-19!83;UBERON:0007282!1.35e-19!83;UBERON:0009618!1.35e-19!83;UBERON:0007285!1.35e-19!83;UBERON:0004290!1.64e-19!70;UBERON:0001134!3.16e-19!61;UBERON:0002036!3.16e-19!61;UBERON:0003082!3.16e-19!61;UBERON:0002385!5.18e-18!63;UBERON:0001015!5.18e-18!63;UBERON:0000383!5.18e-18!63;UBERON:0000486!2.13e-17!82;UBERON:0005256!2.78e-12!143;UBERON:0004872!4.48e-12!84;UBERON:0001637!5.07e-11!42;UBERON:0003509!5.07e-11!42;UBERON:0004572!5.07e-11!42;UBERON:0004573!2.00e-10!33;UBERON:0004571!2.00e-10!33;UBERON:0001009!1.80e-09!113;UBERON:0002049!2.05e-09!79;UBERON:0007798!2.05e-09!79;UBERON:0004535!2.09e-09!110;UBERON:0000475!1.39e-08!365;UBERON:0002100!1.83e-08!216;UBERON:0002200!2.27e-08!11;UBERON:0006876!2.27e-08!11;UBERON:0003914!1.17e-07!118;UBERON:0000490!1.38e-07!138;UBERON:0001981!2.65e-07!60;UBERON:0007500!2.65e-07!60;UBERON:0004537!2.65e-07!60;UBERON:0006965!2.65e-07!60;UBERON:0002199!5.50e-07!45;UBERON:0002416!5.50e-07!45;UBERON:0001135!5.54e-07!15;UBERON:0004237!6.76e-07!10;UBERON:0004695!6.76e-07!10;UBERON:0002111!6.76e-07!10;UBERON:0004178!6.76e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0004237;2.79e-11;10!UBERON:0004695;2.79e-11;10!UBERON:0002111;2.79e-11;10!UBERON:0004178;2.79e-11;10!UBERON:0004573;3.40e-11;33!UBERON:0004571;3.40e-11;33!UBERON:0000948;6.34e-11;22!UBERON:0001135;1.36e-10;15!UBERON:0001637;3.64e-10;42!UBERON:0003509;3.64e-10;42!UBERON:0004572;3.64e-10;42!UBERON:0002385;6.48e-10;31!UBERON:0001015;6.48e-10;31!UBERON:0000383;6.48e-10;31!UBERON:0007100;3.64e-09;25!UBERON:0006876;1.75e-08;11!UBERON:0000992;2.28e-08;13!UBERON:0000947;2.78e-08;21!UBERON:0010191;2.78e-08;21!UBERON:0000488;2.25e-07;4!UBERON:0002119;6.85e-07;4!UBERON:0002203;7.03e-07;6!UBERON:0001768;7.03e-07;6!UBERON:0002200;7.03e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0004237;2.79e-11;10!UBERON:0004695;2.79e-11;10!UBERON:0002111;2.79e-11;10!UBERON:0004178;2.79e-11;10!UBERON:0004573;3.40e-11;33!UBERON:0004571;3.40e-11;33!UBERON:0000948;6.34e-11;22!UBERON:0001135;1.36e-10;15!UBERON:0001637;3.64e-10;42!UBERON:0003509;3.64e-10;42!UBERON:0004572;3.64e-10;42!UBERON:0002385;6.48e-10;31!UBERON:0001015;6.48e-10;31!UBERON:0000383;6.48e-10;31!UBERON:0007100;3.64e-09;25!UBERON:0006876;1.75e-08;11!UBERON:0000992;2.28e-08;13!UBERON:0000947;2.78e-08;21!UBERON:0010191;2.78e-08;21!UBERON:0000488;2.25e-07;4!UBERON:0002119;6.85e-07;4!UBERON:0002203;7.03e-07;6!UBERON:0001768;7.03e-07;6!UBERON:0002200;7.03e-07;6 | ||
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| ||
|short_description=p8@PAPPA | |short_description=p8@PAPPA | ||
}} | }} |
Latest revision as of 17:48, 24 September 2015
Short description: | p8@PAPPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PAPPA_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | -89bp_to_NM_002581, uc004bjn.2_5end |
EntrezGene: | PAPPA |
HGNC: | 8602 |
UniProt: | Q13219Q7Z613Q86YM8Q8IWT8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 3.19e-28 | 55 |
muscle precursor cell | 3.77e-26 | 58 |
myoblast | 3.77e-26 | 58 |
multi-potent skeletal muscle stem cell | 3.77e-26 | 58 |
electrically responsive cell | 2.74e-24 | 61 |
electrically active cell | 2.74e-24 | 61 |
smooth muscle cell | 1.53e-20 | 43 |
smooth muscle myoblast | 1.53e-20 | 43 |
vascular associated smooth muscle cell | 5.54e-20 | 32 |
cardiocyte | 9.80e-15 | 16 |
aortic smooth muscle cell | 1.05e-11 | 10 |
mesodermal cell | 2.50e-10 | 121 |
fibroblast | 5.20e-09 | 76 |
cardiac mesenchymal cell | 1.79e-07 | 4 |
migratory trunk neural crest cell | 1.79e-07 | 4 |
multi fate stem cell | 2.78e-07 | 427 |
somatic stem cell | 6.72e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.96e-09 | 14 |