FFCP PHASE1:Hg19::chr6:130757807..130757811,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:130757807..130757811,+
|short_description=p16@TMEM200A
|description=CAGE_peak_16_at_TMEM200A_5end
|association_with_transcript=-450bp_to_ENST00000392429,NM...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=114801 | |EntrezGene=114801 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21075 | |HGNC=21075 | ||
|TSSclassifier=strong | |||
|UniProt=Q86VY9,A8K2A1 | |UniProt=Q86VY9,A8K2A1 | ||
|association_with_transcript=-450bp_to_ENST00000392429,NM_052913,uc003qcb.2_5end | |||
|cluster_id=chr6:130757807..130757811,+ | |||
|description=CAGE_peak_16_at_TMEM200A_5end | |||
|id=chr6:130757807..130757811,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000511;7.43e-11;1!CL:0002625;7.43e-11;1!CL:0000216;7.43e-11;1!CL:0002591;7.43e-11;1!CL:0000540;2.95e-07;6!CL:0000404;2.95e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,3.41e-11,1;CL:0002625,3.41e-11,1;CL:0000216,3.41e-11,1;CL:0002591,1.33e-10,1;CL:0000540,2.45e-07,6;CL:0000031,2.45e-07,6;CL:0000404,2.45e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000031;2.95e-07;6 | |||
|ontology_enrichment_disease=DOID:2394!1.46e-10!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;9.77e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.23e-07,14 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;7.43e-11;1!UBERON:0001136;7.43e-11;1!UBERON:0001343;7.43e-11;1!UBERON:0005208;7.43e-11;1!UBERON:0004910;7.43e-11;1!UBERON:0004145;7.43e-11;1!UBERON:0005946;7.43e-11;1!UBERON:0004813;7.43e-11;1!UBERON:0005965;7.43e-11;1!UBERON:0002078;7.43e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004145,1.60e-13,3;UBERON:0001136,3.41e-11,1;UBERON:0001343,3.41e-11,1;UBERON:0004910,3.41e-11,1;UBERON:0005154,3.41e-11,1;UBERON:0005295,3.41e-11,1;UBERON:0004813,3.41e-11,1;UBERON:0005297,3.41e-11,1;UBERON:0005294,3.41e-11,1;UBERON:0010141,3.41e-11,1;UBERON:0005891,3.41e-11,1;UBERON:0002134,6.14e-11,1;UBERON:0005208,6.14e-11,1;UBERON:0005946,6.14e-11,1;UBERON:0005965,6.14e-11,1;UBERON:0002078,6.14e-11,1 | |||
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|phase1_expression=0.363356758541113,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.382067028739756,0.328402357799783,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0.221533894583621,0,0,0.390178042679635,0.986627427622057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0,0.263504357079378,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,3.31022952033047,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0.122834317311768,0,0,0.494533858557114,0,0,0.168336113954066,0,0,0,0.30648779579902,0,0,0.358779271377724,0,0,0,0,0.515281080091258,0.18611685633159,1.5189869901714,0.194874010322397,0.757301322732344,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0.290633938513962,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0.775630294546667,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0.399891964728228,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0.256686072559497,0,0,1.54657762555539,0,1.27587750330633,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,0.496215615637554,1.84154367945675,0,0,0.511707249066704,0,0,0,0.355123450626254,0.246381468041427,1.55776328755086,0.348631135379878,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165018999841176,0,0,1.6068392984416,0.096670718292122,0,0,0,0,0,0,0.178064071293475,0,0,0.255225424989168,0,0,1.25924938732256,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0.179872457583315,0,0.235624804691373,0,0,0,0,0,0,0,0.141405431953713,1.13008116620243,0,0.66343897524122,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0.7133421029625,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0.383010740264733,0,0,0,0,0,0,0.677167111206413,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0.121360521749513,0.111443384277478,0,0,0,0,0,0,0.556543525114529,0,0,0,0,1.0077309914171,0.715880777515084,0,0.933118762985422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0.141353071433941,0.432777279484182,0,0,0,0.296521128680622,0,0,0,0,0,0.91227394607833,0,0,0,1.20990716048664,0,0.063186579628488,0.150323419414493,0,0,0,0.313932918407225,1.19472429772959,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0.137041924646751,0.397429223405979,0,0,0.160317640503067,0,0,0,0,0,0,0.745515213392595,0,0.135904206073614,0,0,0,0,0.136905378891993,0,0,0.262887354279314,0,0.916641696046735,1.43574604915363,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0.169346664131569,0.795229689809303,0,0,0,0,0,0,0.121499113316049,0,0.157611414598396,0.0524545881349981,0.739202355635845,0,0.191915197319445,0,0,0,0.542999601753713,0,0,0,0.082092520749339,1.02232813071253,0.113312091520126,0,0,0.129282956361551,0,0,0,0.106787412567695,0.157204305099666,0.414239055347196,0.496166021811951,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0.138348634936231,0,0,0,0.470531639396343,0,0,0.149254802886874,0,0,0.189403005275089,0.251567901752575,0,0,0.453692771289717,0,0,0.159296767163702,0.449803112163605,0.155262956876259,0,0.53168342911599,2.08698024724694,0.601030435988874,1.52322084867518,1.22061219961398,0.545545977607678,0.214821114084977,0.464033759878494,0.398095888698616,0,1.37358282073117,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0.192914038270915,0.168942440653073,0,0,0,0,0.194860308839388,0.132864840313363,0.981392365535065,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0.157265941855896,0,0,1.48802444071178,0.371807292777007,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0.322951291263702,0,0,0,0,0.115525666150338,0,0.690359926060101,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0.546974809018219,0,0.496211178389294,0,0,0,0,1.21393120847326,0.227662191351298,0,0.806637912890455,0,0.0679697329768317,0,0,0,0.156986185701028,0,0,0,0,0.47775168788705,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0,0.473328002922261,0.426067023795788,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0.11294608203896,0,0,0.0771741581079447,0.655678681511872,0,0,0,0,0,0,0.509781344063451,0.0939839179798536,0,0.199882311849858,0,0.352894871715692,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0.23806443146374,0,0.124149428591716,0.33639558774184,0,0,0,0.342233301085281,0,0.0717222053926763,0.332660356546013,0.0814032686109745,0,0,0,0,0.244482888365733,0,0,0,0 | ||
|short_description=p16@TMEM200A | |||
}} | }} |
Latest revision as of 17:42, 24 September 2015
Short description: | p16@TMEM200A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_TMEM200A_5end |
Coexpression cluster: | NA |
Association with transcript: | -450bp_to_ENST00000392429, NM_052913, uc003qcb.2_5end |
EntrezGene: | TMEM200A |
HGNC: | 21075 |
UniProt: | Q86VY9A8K2A1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 3.41e-11 | 1 |
seminiferous tubule epithelial cell | 3.41e-11 | 1 |
Sertoli cell | 3.41e-11 | 1 |
smooth muscle cell of the pulmonary artery | 1.33e-10 | 1 |
neuron | 2.45e-07 | 6 |
neuroblast | 2.45e-07 | 6 |
electrically signaling cell | 2.45e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
outflow tract | 1.60e-13 | 3 |
mesothelium | 3.41e-11 | 1 |
seminiferous tubule of testis | 3.41e-11 | 1 |
epithelium of male gonad | 3.41e-11 | 1 |
epithelial cord | 3.41e-11 | 1 |
sex cord | 3.41e-11 | 1 |
seminiferous tubule epithelium | 3.41e-11 | 1 |
testis sex cord | 3.41e-11 | 1 |
genital ridge | 3.41e-11 | 1 |
primitive sex cord of indifferent gonad | 3.41e-11 | 1 |
coelomic epithelium | 3.41e-11 | 1 |
tricuspid valve | 6.14e-11 | 1 |
right atrium valve | 6.14e-11 | 1 |
outflow tract of atrium | 6.14e-11 | 1 |
outflow part of right atrium | 6.14e-11 | 1 |
right cardiac atrium | 6.14e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.23e-07 | 14 |