FFCP PHASE1:Hg19::chr6:130687172..130687179,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114801 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21075 | |||
|TSSclassifier=strong | |||
|UniProt=Q86VY9 | |||
|association_with_transcript=293bp_to_ENST00000296978,uc003qca.2,uc010kfh.2_5end | |||
|cluster_id=chr6:130687172..130687179,+ | |||
|coexpression_cluster_id=C714 | |||
|description=CAGE_peak_10_at_TMEM200A_5end | |||
|id=chr6:130687172..130687179,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.37e-26!180;CL:0000192!1.21e-20!42;CL:0000514!1.21e-20!42;CL:0000680!2.54e-17!57;CL:0000056!2.54e-17!57;CL:0000355!2.54e-17!57;CL:0000187!3.69e-16!54;CL:0000359!4.82e-16!32;CL:0000393!1.06e-15!60;CL:0000211!1.06e-15!60;CL:0000183!1.19e-13!59;CL:0000057!1.94e-11!75;CL:0002334!2.53e-10!12;CL:0002539!8.19e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.73e-30;32!CL:0002334;2.59e-24;12!CL:0000192;9.71e-20;43!CL:0002539;5.55e-16;10!CL:0002594;5.88e-12;4!CL:1000306;1.20e-11;4!CL:0002547;1.20e-11;4!CL:0000187;1.51e-10;55!CL:0002579;5.40e-09;3!CL:0000393;9.08e-09;61!CL:0000211;9.08e-09;61!CL:0002595;1.45e-08;5!CL:0002580;1.97e-08;3!CL:0002582;2.82e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,4.59e-32,32;CL:0000192,5.49e-27,43;CL:0000514,5.49e-27,43;CL:0002334,2.51e-24,12;CL:0000187,9.49e-22,55;CL:0000680,2.84e-20,58;CL:0000056,2.84e-20,58;CL:0000355,2.84e-20,58;CL:0000393,6.06e-19,61;CL:0000211,6.06e-19,61;CL:0002539,3.58e-16,10;CL:0002594,5.84e-12,4;CL:1000306,1.12e-11,4;CL:0002547,1.12e-11,4;CL:0002579,5.95e-09,3;CL:0000048,9.79e-09,427;CL:0002595,1.54e-08,5;CL:0002580,1.57e-08,3;CL:0000723,2.04e-08,433;CL:0002582,2.20e-08,3;CL:0000034,5.27e-08,441;CL:0000222,5.82e-08,121 | |||
|ontology_enrichment_development_v019=CL:0000514;9.71e-20;43!CL:0000355;3.83e-09;58 | |||
|ontology_enrichment_disease=DOID:2394!7.80e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.02e-08;3!DOID:127;1.02e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,9.09e-09,3;DOID:127,9.09e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0001134!4.33e-16!61;UBERON:0002036!4.33e-16!61;UBERON:0003082!4.33e-16!61;UBERON:0002385!7.69e-16!63;UBERON:0001015!7.69e-16!63;UBERON:0000383!7.69e-16!63;UBERON:0004290!1.10e-13!70;UBERON:0000486!2.45e-13!82;UBERON:0000914!3.87e-13!83;UBERON:0002329!3.87e-13!83;UBERON:0003077!3.87e-13!83;UBERON:0003059!3.87e-13!83;UBERON:0007282!3.87e-13!83;UBERON:0009618!3.87e-13!83;UBERON:0007285!3.87e-13!83;UBERON:0001637!1.86e-12!42;UBERON:0003509!1.86e-12!42;UBERON:0004572!1.86e-12!42;UBERON:0004573!7.56e-10!33;UBERON:0004571!7.56e-10!33;UBERON:0001981!1.05e-08!60;UBERON:0007500!1.05e-08!60;UBERON:0004537!1.05e-08!60;UBERON:0006965!1.05e-08!60;UBERON:0004872!1.07e-08!84;UBERON:0001135!8.61e-08!15;UBERON:0002049!3.39e-07!79;UBERON:0007798!3.39e-07!79;UBERON:0000055!6.05e-07!69;UBERON:0003688!6.74e-07!6;UBERON:0002358!6.74e-07!6;UBERON:0003684!6.74e-07!6;UBERON:0001178!6.74e-07!6;UBERON:0004237!8.19e-07!10;UBERON:0004695!8.19e-07!10;UBERON:0002111!8.19e-07!10;UBERON:0004178!8.19e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.71e-23;33!UBERON:0004571;2.71e-23;33!UBERON:0001637;1.79e-19;42!UBERON:0003509;1.79e-19;42!UBERON:0004572;1.79e-19;42!UBERON:0000947;5.12e-16;21!UBERON:0010191;5.12e-16;21!UBERON:0004237;5.55e-16;10!UBERON:0004695;5.55e-16;10!UBERON:0002111;5.55e-16;10!UBERON:0004178;5.55e-16;10!UBERON:0001310;5.88e-12;4!UBERON:0004797;1.20e-11;4!UBERON:0000415;1.20e-11;4!UBERON:0007240;1.20e-11;4!UBERON:0005742;1.20e-11;4!UBERON:0005734;1.20e-11;4!UBERON:0004664;1.20e-11;4!UBERON:0004663;1.20e-11;4!UBERON:0007500;1.73e-11;56!UBERON:0001981;1.73e-11;56!UBERON:0004537;1.73e-11;56!UBERON:0003688;5.27e-11;6!UBERON:0002358;5.27e-11;6!UBERON:0003684;5.27e-11;6!UBERON:0001178;5.27e-11;6!UBERON:0001135;3.79e-10;15!UBERON:0004457;6.13e-10;9!UBERON:0000042;6.13e-10;9!UBERON:0000055;1.87e-09;65!UBERON:0003834;1.45e-08;5!UBERON:0001533;1.45e-08;5!UBERON:0010260;1.54e-07;9!UBERON:0003914;1.79e-07;74!UBERON:0002049;6.89e-07;75!UBERON:0007798;6.89e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,2.77e-31,42;UBERON:0003509,2.77e-31,42;UBERON:0004572,2.77e-31,42;UBERON:0004573,1.07e-24,33;UBERON:0004571,1.07e-24,33;UBERON:0007500,3.88e-22,59;UBERON:0001981,3.88e-22,59;UBERON:0004537,3.88e-22,59;UBERON:0006965,3.88e-22,59;UBERON:0004872,2.41e-19,83;UBERON:0001134,1.57e-18,62;UBERON:0002036,1.57e-18,62;UBERON:0003082,1.57e-18,62;UBERON:0000055,2.87e-18,68;UBERON:0002385,9.65e-18,64;UBERON:0001015,9.65e-18,64;UBERON:0000383,9.65e-18,64;UBERON:0004237,3.58e-16,10;UBERON:0004695,3.58e-16,10;UBERON:0002111,3.58e-16,10;UBERON:0004178,3.58e-16,10;UBERON:0000947,3.62e-16,21;UBERON:0010191,3.62e-16,21;UBERON:0002329,2.42e-15,71;UBERON:0003059,2.42e-15,71;UBERON:0007282,2.42e-15,71;UBERON:0004290,2.42e-15,71;UBERON:0009618,2.42e-15,71;UBERON:0003077,4.88e-15,72;UBERON:0007285,4.88e-15,72;UBERON:0002049,4.88e-15,78;UBERON:0007798,4.88e-15,78;UBERON:0007524,9.62e-15,73;UBERON:0000486,1.18e-14,83;UBERON:0007503,2.20e-13,78;UBERON:0004535,7.49e-13,109;UBERON:0001009,2.64e-12,112;UBERON:0001310,5.84e-12,4;UBERON:0000415,1.12e-11,4;UBERON:0007240,1.12e-11,4;UBERON:0005742,1.12e-11,4;UBERON:0005734,1.12e-11,4;UBERON:0004664,1.12e-11,4;UBERON:0004663,1.12e-11,4;UBERON:0003914,1.86e-11,117;UBERON:0003688,6.55e-11,6;UBERON:0002358,6.55e-11,6;UBERON:0003684,6.55e-11,6;UBERON:0001178,6.55e-11,6;UBERON:0001135,2.87e-10,15;UBERON:0003834,1.54e-08,5;UBERON:0001533,1.54e-08,5;UBERON:0000926,9.86e-08,315;UBERON:0004120,9.86e-08,315;UBERON:0006603,9.86e-08,315;UBERON:0010260,1.34e-07,9;UBERON:0004457,3.43e-07,12;UBERON:0000042,3.43e-07,12 | |||
|phase1_expression=2.18014055124668,0.856402095563933,1.40954404095971,2.00146596706261,0.893922188854576,3.48935409640147,0,0,0,0.245733936501509,0,0,0,0,0,2.01697543935533,3.01347264011988,3.65155045193687,2.43966399395253,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0.393364276848904,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0,0,0.552700035571697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0.973269740605272,0,0.221729397462564,0.087834785693126,0.392937226493138,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,3.79891534993739,4.50191214764944,2.29469296599051,5.32002573297536,1.12135520028461,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0,0,0.234321431833797,0,0,0,0.352303495931295,0.161872944368132,0,0,0,0,1.18800285728205,0,0,0.718618141816238,0.168336113954066,0.125118519871964,0,0,0.30648779579902,0.300476117813194,0.113432183160021,0.179389635688862,0.85422955527427,0.635795703478686,0,0.309157587715317,0.515281080091258,0.744467425326359,1.68776332241266,0.68205903612839,0,0.0920498986422993,0.80823028409406,0.355009592516614,0.201504196455281,0.169560592310488,0.193260853163297,0.272746120590835,0,0,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0.171567810298526,0,0,0.402115889646523,0,0,0,0,0,1.6437217193015,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0.2933531432838,4.39523833576444,0,0,5.05282421511254,4.16029747645464,0,0,0,0,0,0,0,0,0,0.301439377059586,0,1.29964888536674,0,0,0,0,0,4.27910715122155,0.144781306667579,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,1.03985430765404,0.178428988797162,0,0.585707074963566,0.601892199455438,0,1.03473071292505,4.64957918974806,1.10621501125022,0.60818530127658,0,0,0,0,0,0,0,0,3.96972492510043,2.14846762603287,1.68396056659844,3.58789617915963,2.04682899626681,4.50390979202101,0,1.07946785661859,3.55123450626254,2.38168752440047,2.59627214591811,1.51073491997947,0.241718899183244,0.200506470303285,0,0.68888668898764,0.364182336013434,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,0,0,0.290012154876366,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,1.85938219718914,5.98143458978216,4.8792608911242,0,0,1.73986598415015,6.11569923042936,0.143124886741991,0,0,0.571890581771475,0.255897791311334,0,5.09125196681499,0,0.359744915166629,0.54907405947211,0.471249609382746,1.2130948894399,0,0.421258456238981,0.48763373908959,4.6305563029944,0,1.9109987597118,1.27264888758341,6.78048699721457,3.30819206127675,1.32687795048244,1.31535265576129,0,0.655894752046633,5.68149055495571,3.717881977197,3.3803472303869,1.72093622644862,0.589494246078727,9.27344733851251,0.354761064070598,1.26664581178598,0.329294892959902,0,0.349934720244983,0,0,0,0.0941438007767792,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0,0,0.276283915531148,0.251932747854276,0.102268682502155,0,0.622079175323615,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.692552326534174,0,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0.649165919226273,0,0.0884575645033392,1.22206028986725,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0.794858446811959,0,0,0.240476460754601,0,0,0,0,0.171594997861965,0,0.248505071130865,0,0.815425236441684,0.732219924186332,0,0.288950589901519,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0.169346664131569,0,0.136203406111576,0,0.137539436597234,0.415440338029185,0,0,0.121499113316049,0,0.315222829196793,0.944182586429966,0.211200673038813,0,0,1.42939065274673,0,0,3.25799761052228,2.5926644736038,2.61269888087527,0,0.082092520749339,1.87426823963964,0.113312091520126,0,0,0,0,0,0,0.320362237703084,0.314408610199332,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0,0.554805861502613,0.378806010550178,0.50313580350515,0,0.457680136793847,2.7221566277383,2.17612080815893,0.591420599958536,1.43367090447332,0,0.931577741257556,2.90294345488599,5.84851772027589,1.04349012362347,0.150257608997218,3.80805212168795,1.22061219961398,0.909243296012797,0.537052785212442,0.464033759878494,0,0,1.03018711554838,0,0,0,0,0,0,0.231522474323834,0.244736704506468,0,0,0.438568099157414,0.353378291891762,0.38582807654183,0,0,0,0,0,0.389720617678777,0,0.163565394255844,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0.157265941855896,0,0,1.91317428091515,0,0,1.59002175326709,0,0.80057074828547,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0.526472298444801,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0.175871244359621,0,0,0,0.606965604236632,0.227662191351298,0,0,0,0,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,0.801711364730253,0,0,0,0,0.591660003652827,0.340853619036631,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0.198950775161368,0,0,0,0,0.0771741581079447,2.18559560503957,0,0,0,0,0,0.4226557275834,2.0391253762538,0,0.0644578879735772,0,0,1.76447435857846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530450887527676,0,0,0,0.213233981900981,0,0.258355639344024,0.0620747142958579,0.672791175483681,0.25458863311266,0.202117188958219,0,0,0,0.286888821570705,0,0,0,0,0,0,0.611207220914332,0.406896178315738,0,0,0 | |||
|short_description=p10@TMEM200A | |||
}} |
Latest revision as of 17:34, 24 September 2015
Short description: | p10@TMEM200A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_TMEM200A_5end |
Coexpression cluster: | C714_Smooth_Fibroblast_Mesenchymal_mesenchymal_Myoblast_leiomyoma_Preadipocyte |
Association with transcript: | 293bp_to_ENST00000296978, uc003qca.2, uc010kfh.2_5end |
EntrezGene: | TMEM200A |
HGNC: | 21075 |
UniProt: | Q86VY9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 4.59e-32 | 32 |
smooth muscle cell | 5.49e-27 | 43 |
smooth muscle myoblast | 5.49e-27 | 43 |
preadipocyte | 2.51e-24 | 12 |
muscle cell | 9.49e-22 | 55 |
muscle precursor cell | 2.84e-20 | 58 |
myoblast | 2.84e-20 | 58 |
multi-potent skeletal muscle stem cell | 2.84e-20 | 58 |
electrically responsive cell | 6.06e-19 | 61 |
electrically active cell | 6.06e-19 | 61 |
aortic smooth muscle cell | 3.58e-16 | 10 |
smooth muscle cell of the umbilical artery | 5.84e-12 | 4 |
fibroblast of tunica adventitia of artery | 1.12e-11 | 4 |
fibroblast of the aortic adventitia | 1.12e-11 | 4 |
omentum preadipocyte | 5.95e-09 | 3 |
multi fate stem cell | 9.79e-09 | 427 |
smooth muscle cell of the subclavian artery | 1.54e-08 | 5 |
preadipocyte of the breast | 1.57e-08 | 3 |
somatic stem cell | 2.04e-08 | 433 |
visceral preadipocyte | 2.20e-08 | 3 |
stem cell | 5.27e-08 | 441 |
mesodermal cell | 5.82e-08 | 121 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 9.09e-09 | 3 |
leiomyoma | 9.09e-09 | 3 |