FFCP PHASE1:Hg19::chr6:130687103..130687170,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:130687103..130687170,+
|short_description=p1@TMEM200A
|description=CAGE_peak_1_at_TMEM200A_5end
|association_with_transcript=224bp_to_ENST00000296978,uc003...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=114801 | |EntrezGene=114801 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21075 | |HGNC=21075 | ||
|TSSclassifier=strong | |||
|UniProt=Q86VY9 | |UniProt=Q86VY9 | ||
|association_with_transcript=224bp_to_ENST00000296978,uc003qca.2,uc010kfh.2_5end | |||
|cluster_id=chr6:130687103..130687170,+ | |||
|coexpression_cluster_id=C714 | |||
|description=CAGE_peak_1_at_TMEM200A_5end | |||
|id=chr6:130687103..130687170,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.22e-39!180;CL:0000192!2.25e-20!42;CL:0000514!2.25e-20!42;CL:0000393!1.72e-19!60;CL:0000211!1.72e-19!60;CL:0000680!2.95e-19!57;CL:0000056!2.95e-19!57;CL:0000355!2.95e-19!57;CL:0000187!2.95e-19!54;CL:0000359!8.96e-19!32;CL:0000183!5.48e-18!59;CL:0000057!8.38e-18!75;CL:0002334!1.18e-08!12;CL:0002539!1.17e-07!10;CL:0000222!1.25e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.81e-19;32!CL:0000192;5.66e-16;43!CL:0000393;5.76e-10;61!CL:0000211;5.76e-10;61!CL:0000187;7.86e-10;55!CL:0002334;1.97e-09;12!CL:0002539;2.58e-08;10!CL:0000057;1.37e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,6.79e-22,43;CL:0000514,6.79e-22,43;CL:0000359,1.22e-20,32;CL:0000680,2.91e-19,58;CL:0000056,2.91e-19,58;CL:0000355,2.91e-19,58;CL:0000057,3.17e-19,76;CL:0000187,3.33e-19,55;CL:0000393,3.77e-19,61;CL:0000211,3.77e-19,61;CL:0002334,2.01e-09,12;CL:0002539,2.56e-08,10;CL:0000034,3.23e-08,441;CL:0000723,1.13e-07,433;CL:0000048,1.53e-07,427;CL:0000222,3.01e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;5.66e-16;43!CL:0000355;1.15e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;2.08e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.36e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.16e-19!83;UBERON:0002329!1.16e-19!83;UBERON:0003077!1.16e-19!83;UBERON:0003059!1.16e-19!83;UBERON:0007282!1.16e-19!83;UBERON:0009618!1.16e-19!83;UBERON:0007285!1.16e-19!83;UBERON:0004290!5.27e-19!70;UBERON:0001134!6.19e-19!61;UBERON:0002036!6.19e-19!61;UBERON:0003082!6.19e-19!61;UBERON:0002385!7.02e-19!63;UBERON:0001015!7.02e-19!63;UBERON:0000383!7.02e-19!63;UBERON:0000486!1.25e-16!82;UBERON:0000475!2.93e-13!365;UBERON:0001637!3.18e-13!42;UBERON:0003509!3.18e-13!42;UBERON:0004572!3.18e-13!42;UBERON:0004573!1.65e-11!33;UBERON:0004571!1.65e-11!33;UBERON:0002049!8.54e-11!79;UBERON:0007798!8.54e-11!79;UBERON:0005256!3.32e-10!143;UBERON:0004872!1.00e-09!84;UBERON:0001981!2.77e-09!60;UBERON:0007500!2.77e-09!60;UBERON:0004537!2.77e-09!60;UBERON:0006965!2.77e-09!60;UBERON:0000481!2.17e-08!347;UBERON:0000119!2.27e-08!312;UBERON:0004535!2.86e-08!110;UBERON:0000055!3.74e-08!69;UBERON:0002100!3.87e-08!216;UBERON:0001135!6.11e-08!15;UBERON:0000483!7.06e-08!309;UBERON:0004237!1.17e-07!10;UBERON:0004695!1.17e-07!10;UBERON:0002111!1.17e-07!10;UBERON:0004178!1.17e-07!10;UBERON:0001009!1.68e-07!113;UBERON:0003102!2.92e-07!95;UBERON:0000490!4.98e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.99e-11;33!UBERON:0004571;2.99e-11;33!UBERON:0001637;6.78e-10;42!UBERON:0003509;6.78e-10;42!UBERON:0004572;6.78e-10;42!UBERON:0001135;1.35e-08;15!UBERON:0004237;2.58e-08;10!UBERON:0004695;2.58e-08;10!UBERON:0002111;2.58e-08;10!UBERON:0004178;2.58e-08;10 | |||
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|phase1_expression=27.4334352698541,14.9870366723688,23.1165222717393,17.0124607200322,12.9618717383913,51.4679729219218,2.53299878168311,3.79031924056099,1.30592814099919,6.14334841253772,0,0,0.263766978228454,1.98026164736075,2.98257638155124,53.786011716142,45.2020896017983,58.4248072309899,56.1122718609083,3.20114750999649,7.75202626728161,2.19418305034661,1.14494394852423,1.09499540058307,0.87879847716362,3.51501666440576,4.02292888304734,2.91229890860613,0,0,0,0,0,0,0,0,2.64240395401362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68152568894461,0.263384084775077,0,0,0,0,0,0,0,2.78526142212934,0,0.221533894583621,0,0.25618263945135,1.04047478047903,3.61763390128087,1.65810010671509,1.15921234294021,0,0,0,1.58633079776593,0,0.34362744548263,0,0.95569624297229,0,0,0.150575119077773,0.639933055772092,0,0.473554504088034,0,0.403213486449465,0,0,4.87613732627923,4.02420515822182,1.02290049474824,4.3372698286148,4.01070328508712,4.63508860674636,0.795285947051099,2.43317435151318,3.59232305223458,3.99112915432615,3.24988707064566,5.82856885964821,6.19301990097322,0,0.97364218096405,1.21890816109487,0,0,0,0.371457501329565,0,1.72046919021225,0,0,0,1.37559020970034,1.04497483268405,0.516833518338658,2.13459757612026,0.66944122552934,0.402829317109147,0.760272105718513,0,0,0.81014194788176,0.0892997282840798,0,0,0,0,1.46561395144326,0,0,0,23.8546536813753,71.2929780671584,59.4517221851352,116.742504644767,81.9283962878205,10.6528744027038,2.1349799145941,0.98667019366864,8.40269795579369,0.67355336034844,3.75962377160955,5.75158225050739,5.76175924479999,5.62371436401112,2.18512053781224,1.71141546463335,8.21967743034906,4.46251094846307,1.13311061057692,1.96631129383148,1.22492502752936,2.82518929817066,3.09977343527296,5.94001428641027,9.64341024186372,20.9337113245746,22.2771623963034,1.85169725349473,1.62654075833553,1.38532057742091,7.46261955497424,5.82326812018137,13.3711872426871,2.04177929688038,12.9160537695981,13.8812302732069,10.172731255659,3.90118424909723,6.28620428354477,9.53269998168828,14.517114793864,17.5527385530917,24.9438733212668,3.02920529092937,6.07529331039176,15.0330832841495,11.3603069605317,4.53384442024381,5.08681776931463,7.92369497969517,7.0913991353617,1.72082757233402,5.00092195131341,6.49395864775278,7.43641234364918,4.35376431064556,5.2987378683882,7.66452454059243,1.56449532329816,5.78916844373597,1.38134921352481,3.71494342425583,5.77503585335668,0,0,0,0,0,0,0,0,0,0,2.80483547606892,2.8810180793198,4.41026134156626,0,0,0.590789906681404,0,2.58275720940538,5.83330555014987,4.17051084552777,1.1240175325762,12.0634766893957,2.03694579348765,3.58389135841357,0,2.88662684050547,5.10093781890338,23.1295127644569,0,0,0.190254152234598,0,0,0,0,0,0,4.87148171776693,4.82035330624114,2.68675568108545,5.23141089325132,8.81780162079986,0,0,0,0,0.6312121671319,0,0,0,1.71072446022705,0.514137463516618,0,0,3.92458795208763,10.899001720832,7.84719658284165,85.7071475474067,10.7296933755565,0.845302752556,50.2623040345405,82.1658751599792,0.771622122786426,9.92943924162948,1.8649552531127,0.57191197463259,5.42621605391443,4.93944202068461,0.325736184293735,0,8.71147060226772,22.9093926565285,32.2467379682109,41.5887643317357,0,0,0,3.83399768786532,3.44585807502342,85.582143024431,2.31650090668127,5.75333703141074,1.61154866915906,0,0,0.215627574859517,0.128343036279748,1.01637849688985,0,1.54657762555539,1.34013012267479,0.637938751653163,0,0,0,2.33113834266366,2.50085260529839,3.7977103317963,7.69492187663986,7.49401752948079,3.6271555457805,10.7770101793296,18.6586581831186,15.9185252839189,11.3820378421755,28.5617007370238,23.9679919104214,9.90473204936145,1.17480694477644,0.686286847621712,0,0,0,0,0,0,40.1934648666418,33.3012482035096,38.7310930317642,40.8763886125686,35.3078001856025,67.5586468803152,50.4621425912969,41.0197785515064,56.4646286495744,33.7542611216756,33.2322834677517,30.9119606703492,3.74664293734029,2.80709058424599,0.828728900423067,11.1370014719669,13.2926552644903,6.16284750309293,2.25599806453706,2.23344477602803,0,0,0.949964660035881,0,0,1.29549549661284,0,4.6060894382455,2.50844886927427,0,0,0.447749509444357,0,0,1.02580050046556,2.95213181129735,2.60302715731442,2.57602529119306,0.27470839445503,0.082509499920588,10.9110452219273,2.60024098414608,49.8120182516895,6.28359668898793,0.462145851343933,1.5350367472613,0.689182862422653,0.107420244868274,1.45016693914229,0.852266274161009,7.12256285173899,0,0.192190067365106,0,0.10115778085555,83.2073533242142,154.572862293844,72.4918760967024,8.93297382510658,28.2122196068022,60.8953094452551,76.1682540517111,10.4481167321654,4.09374206295634,6.64396791909324,7.05331717518152,2.04718233049067,4.70732886837312,49.3215034285202,6.27958912159384,2.87795932133304,11.5305552489143,12.2524898439514,33.7644744227438,36.4573738697919,6.31887684358472,0.975267478179181,83.3500134538993,44.3730616378373,30.4394802439808,19.0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| ||
|short_description=p1@TMEM200A | |||
}} | }} |
Latest revision as of 17:33, 24 September 2015
Short description: | p1@TMEM200A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMEM200A_5end |
Coexpression cluster: | C714_Smooth_Fibroblast_Mesenchymal_mesenchymal_Myoblast_leiomyoma_Preadipocyte |
Association with transcript: | 224bp_to_ENST00000296978, uc003qca.2, uc010kfh.2_5end |
EntrezGene: | TMEM200A |
HGNC: | 21075 |
UniProt: | Q86VY9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 6.79e-22 | 43 |
smooth muscle myoblast | 6.79e-22 | 43 |
vascular associated smooth muscle cell | 1.22e-20 | 32 |
muscle precursor cell | 2.91e-19 | 58 |
myoblast | 2.91e-19 | 58 |
multi-potent skeletal muscle stem cell | 2.91e-19 | 58 |
fibroblast | 3.17e-19 | 76 |
muscle cell | 3.33e-19 | 55 |
electrically responsive cell | 3.77e-19 | 61 |
electrically active cell | 3.77e-19 | 61 |
preadipocyte | 2.01e-09 | 12 |
aortic smooth muscle cell | 2.56e-08 | 10 |
stem cell | 3.23e-08 | 441 |
somatic stem cell | 1.13e-07 | 433 |
multi fate stem cell | 1.53e-07 | 427 |
mesodermal cell | 3.01e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.36e-07 | 14 |