FFCP PHASE1:Hg19::chrX:23352236..23352252,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=139411 | |EntrezGene=139411 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26392 | |HGNC=26392 | ||
|TSSclassifier=strong | |||
|UniProt=Q96NR3 | |UniProt=Q96NR3 | ||
|association_with_transcript=103bp_to_ENST00000379361_5end | |association_with_transcript=103bp_to_ENST00000379361_5end | ||
|cluster_id=chrX:23352236..23352252,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_5_at_PTCHD1_5end | |description=CAGE_peak_5_at_PTCHD1_5end | ||
|id=chrX:23352236..23352252,+ | |id=chrX:23352236..23352252,+ | ||
|ontology_enrichment_celltype=CL:0000540!1.86e-07!6;CL:0000031!1.86e-07!6;CL:0000404!1.86e-07!6 | |ontology_enrichment_celltype=CL:0000540!1.86e-07!6;CL:0000031!1.86e-07!6;CL:0000404!1.86e-07!6 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.00e-67;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002037;5.37e-34;6!UBERON:0002680;5.99e-23;9!UBERON:0001895;5.99e-23;9!UBERON:0004733;2.08e-17;12!UBERON:0002028;2.08e-17;12!UBERON:0004732;3.99e-16;13!UBERON:0002702;2.74e-12;2!UBERON:0001016;7.10e-09;83!UBERON:0001870;1.26e-08;3!UBERON:0000073;7.00e-07;53!UBERON:0002616;7.00e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,5.37e-34,6;UBERON:0006215,5.37e-34,6;UBERON:0002680,5.99e-23,9;UBERON:0001895,5.99e-23,9;UBERON:0010092,5.99e-23,9;UBERON:0004733,2.09e-17,12;UBERON:0002028,2.09e-17,12;UBERON:0007277,2.09e-17,12;UBERON:0004732,3.99e-16,13;UBERON:0001016,3.80e-15,89;UBERON:0003076,4.52e-14,15;UBERON:0003057,4.52e-14,15;UBERON:0001017,6.20e-13,81;UBERON:0002702,3.62e-12,2;UBERON:0000955,2.15e-11,68;UBERON:0006238,2.15e-11,68;UBERON:0000073,1.96e-10,53;UBERON:0002616,1.96e-10,53;UBERON:0001049,6.82e-10,56;UBERON:0005068,6.82e-10,56;UBERON:0006241,6.82e-10,56;UBERON:0007135,6.82e-10,56;UBERON:0001870,1.51e-08,3;UBERON:0004121,6.91e-08,171;UBERON:0000924,6.91e-08,171;UBERON:0006601,6.91e-08,171;UBERON:0011216,1.33e-07,223;UBERON:0003075,7.97e-07,82;UBERON:0007284,7.97e-07,82 | |||
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| ||
|short_description=p5@PTCHD1 | |short_description=p5@PTCHD1 | ||
}} | }} |
Latest revision as of 17:28, 24 September 2015
Short description: | p5@PTCHD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PTCHD1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 103bp_to_ENST00000379361_5end |
EntrezGene: | PTCHD1 |
HGNC: | 26392 |
UniProt: | Q96NR3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 5.37e-34 | 6 |
rhombic lip | 5.37e-34 | 6 |
regional part of metencephalon | 5.99e-23 | 9 |
metencephalon | 5.99e-23 | 9 |
future metencephalon | 5.99e-23 | 9 |
segmental subdivision of hindbrain | 2.09e-17 | 12 |
hindbrain | 2.09e-17 | 12 |
presumptive hindbrain | 2.09e-17 | 12 |
segmental subdivision of nervous system | 3.99e-16 | 13 |
nervous system | 3.80e-15 | 89 |
posterior neural tube | 4.52e-14 | 15 |
chordal neural plate | 4.52e-14 | 15 |
central nervous system | 6.20e-13 | 81 |
middle frontal gyrus | 3.62e-12 | 2 |
brain | 2.15e-11 | 68 |
future brain | 2.15e-11 | 68 |
regional part of nervous system | 1.96e-10 | 53 |
regional part of brain | 1.96e-10 | 53 |
neural tube | 6.82e-10 | 56 |
neural rod | 6.82e-10 | 56 |
future spinal cord | 6.82e-10 | 56 |
neural keel | 6.82e-10 | 56 |
frontal cortex | 1.51e-08 | 3 |
ectoderm-derived structure | 6.91e-08 | 171 |
ectoderm | 6.91e-08 | 171 |
presumptive ectoderm | 6.91e-08 | 171 |
organ system subdivision | 1.33e-07 | 223 |
neural plate | 7.97e-07 | 82 |
presumptive neural plate | 7.97e-07 | 82 |