FFCP PHASE1:Hg19::chr6:130544116..130544125,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:130544116..130544125,-
|short_description=p5@SAMD3
|description=CAGE_peak_5_at_SAMD3_5end
|association_with_transcript=-17bp_to_ENST00000439090,NM_00101737...") |
No edit summary |
||
(13 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=154075 | |EntrezGene=154075 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21574 | |HGNC=21574 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N6K7 | |UniProt=Q8N6K7 | ||
|association_with_transcript=-17bp_to_ENST00000439090,NM_001017373,uc003qbw.2_5end | |||
|cluster_id=chr6:130544116..130544125,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_5_at_SAMD3_5end | |||
|id=chr6:130544116..130544125,- | |||
|ontology_enrichment_celltype=CL:0000791!5.73e-42!18;CL:0000789!5.73e-42!18;CL:0002420!5.73e-42!18;CL:0002419!5.73e-42!18;CL:0000790!5.73e-42!18;CL:0000084!1.54e-35!25;CL:0000827!1.54e-35!25;CL:0000625!2.22e-27!11;CL:0000838!1.46e-25!52;CL:0000542!6.20e-25!53;CL:0000051!6.20e-25!53;CL:0002087!5.90e-20!119;CL:0000738!1.05e-18!140;CL:0002031!3.26e-15!124;CL:0000624!4.20e-14!6;CL:0000037!3.50e-13!172;CL:0000566!3.50e-13!172;CL:0000988!7.12e-12!182;CL:0002032!1.64e-11!165;CL:0000837!1.64e-11!165;CL:0000623!2.25e-08!3;CL:0000825!2.25e-08!3;CL:0000898!2.88e-08!3;CL:0000842!9.95e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.07e-60;18!CL:0000789;1.07e-60;18!CL:0002419;1.07e-60;18!CL:0000625;1.02e-54;11!CL:0000084;9.00e-43;25!CL:0000623;1.10e-15;3!CL:0000542;1.60e-15;53!CL:0000624;3.27e-08;6!CL:0000898;5.53e-08;3!CL:0000226;2.67e-07;3!CL:0000842;2.67e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.24e-60,18;CL:0000789,1.24e-60,18;CL:0002420,1.24e-60,18;CL:0002419,1.24e-60,18;CL:0000790,1.24e-60,18;CL:0000625,8.11e-55,11;CL:0000084,1.00e-42,25;CL:0000827,1.00e-42,25;CL:0000838,7.02e-31,52;CL:0000542,3.24e-30,53;CL:0000051,3.24e-30,53;CL:0000623,1.49e-15,3;CL:0000825,1.49e-15,3;CL:0002087,2.05e-14,115;CL:0000738,8.19e-13,136;CL:0000893,5.00e-11,2;CL:0002489,5.00e-11,2;CL:0000809,5.00e-11,2;CL:0000808,5.00e-11,2;CL:0000894,5.00e-11,2;CL:0000806,5.00e-11,2;CL:0000807,5.00e-11,2;CL:0000805,5.00e-11,2;CL:0002425,5.00e-11,2;CL:0002031,7.62e-11,120;CL:0000037,1.76e-09,168;CL:0000988,9.19e-09,177;CL:0000624,3.52e-08,6;CL:0002032,5.15e-08,161;CL:0000837,5.15e-08,161;CL:0000898,5.35e-08,3;CL:0000226,2.42e-07,3;CL:0000842,2.42e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.07e-60;18!CL:0000051;1.60e-15;53!CL:0002425;4.08e-11;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!5.59e-21!15;UBERON:0000179!5.59e-21!15;UBERON:0000463!5.59e-21!15;UBERON:0002390!3.21e-09!102;UBERON:0003061!3.21e-09!102;UBERON:0002193!1.36e-08!112;UBERON:0004177!4.23e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.42e-19;15!UBERON:0000179;1.42e-19;15!UBERON:0000463;1.42e-19;15!UBERON:0002390;1.50e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.42e-19,15;UBERON:0000179,1.42e-19,15;UBERON:0000463,1.42e-19,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53531759238885,0.309632246632152,0,0,0,0,0,0,0,0.401088894940283,0.434021741431704,0,0.647787332037959,0.515151135268373,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0.56738522469114,0,0.251248665256743,0,0.217188844705117,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,0,0,0,0.196709770113833,1.17903228824749,0.822405995998037,9.1952572464873,0.32592226663359,0.473447805734733,0,7.5759110681918,4.41908861212256,2.65840673500345,2.43723477388514,8.96639238079726,5.46249259751489,1.97325485524411,3.03985019564433,6.37566788617116,0.444859689486181,0,0,12.3507183540347,6.51474839123266,2.74901956386104,5.06039384039006,3.50421955756506,7.81300144627702,5.70271226669025,2.71035214339991,3.71161172347813,8.74515085866421,6.39298580518846,5.74789597844733,4.03213486449465,3.4767225451856,1.30341963494519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00876629594175,3.15249216323084,2.15627574859517,2.18183161675572,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86091223510599,0.215714200818617,1.38745825144478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.52234282769651,2.29391162142713,0.569647187174163,0.952927101831156,0.822724546172388,1.29694662238543,2.16012574895246,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.891547074219827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.7896618469388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0.375935671919414,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0.124149428591716,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0.366724332548599,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53531759238885,0.309632246632152,0,0,0,0,0,0,0,0.401088894940283,0.434021741431704,0,0.647787332037959,0.515151135268373,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0.56738522469114,0,0.251248665256743,0,0.217188844705117,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,0,0,0,0.196709770113833,1.17903228824749,0.822405995998037,9.1952572464873,0.32592226663359,0.473447805734733,0,7.5759110681918,4.41908861212256,2.65840673500345,2.43723477388514,8.96639238079726,5.46249259751489,1.97325485524411,3.03985019564433,6.37566788617116,0.444859689486181,0,0,12.3507183540347,6.51474839123266,2.74901956386104,5.06039384039006,3.50421955756506,7.81300144627702,5.70271226669025,2.71035214339991,3.71161172347813,8.74515085866421,6.39298580518846,5.74789597844733,4.03213486449465,3.4767225451856,1.30341963494519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00876629594175,3.15249216323084,2.15627574859517,2.18183161675572,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86091223510599,0.215714200818617,1.38745825144478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.52234282769651,2.29391162142713,0.569647187174163,0.952927101831156,0.822724546172388,1.29694662238543,2.16012574895246,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.891547074219827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.7896618469388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0.375935671919414,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0.124149428591716,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0.366724332548599,0.406896178315738,0,0,0 | ||
|short_description=p5@SAMD3 | |||
}} | }} |
Latest revision as of 17:25, 24 September 2015
Short description: | p5@SAMD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SAMD3_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -17bp_to_ENST00000439090, NM_001017373, uc003qbw.2_5end |
EntrezGene: | SAMD3 |
HGNC: | 21574 |
UniProt: | Q8N6K7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 1.42e-19 | 15 |
haemolymphatic fluid | 1.42e-19 | 15 |
organism substance | 1.42e-19 | 15 |