FFCP PHASE1:Hg19::chr22:39268192..39268269,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23466 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1556 | |||
|TSSclassifier=strong | |||
|UniProt=B0QXZ6,O95503 | |||
|association_with_transcript=0bp_to_ENST00000216083,ENST00000469420,NM_014292,uc003awl.2,uc003awm.1_5end | |||
|cluster_id=chr22:39268192..39268269,- | |||
|description=CAGE_peak_1_at_CBX6_5end | |||
|id=chr22:39268192..39268269,- | |||
|ontology_enrichment_celltype=CL:0000055!8.69e-07!180 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!4.22e-10!69;UBERON:0006238!4.22e-10!69;UBERON:0003075!6.30e-10!86;UBERON:0007284!6.30e-10!86;UBERON:0002616!8.39e-10!59;UBERON:0004111!8.58e-10!241;UBERON:0000025!1.92e-09!194;UBERON:0002346!2.42e-09!90;UBERON:0000477!2.52e-09!286;UBERON:0001049!2.94e-09!57;UBERON:0005068!2.94e-09!57;UBERON:0006241!2.94e-09!57;UBERON:0007135!2.94e-09!57;UBERON:0000475!3.17e-09!365;UBERON:0000119!4.67e-09!312;UBERON:0001893!8.08e-09!34;UBERON:0000033!1.21e-08!123;UBERON:0000483!1.98e-08!309;UBERON:0005743!2.20e-08!86;UBERON:0001869!2.38e-08!32;UBERON:0002791!2.77e-08!33;UBERON:0000153!3.82e-08!129;UBERON:0007811!3.82e-08!129;UBERON:0003056!4.83e-08!61;UBERON:0002780!5.80e-08!41;UBERON:0001890!5.80e-08!41;UBERON:0006240!5.80e-08!41;UBERON:0001017!6.63e-08!82;UBERON:0002020!8.77e-08!34;UBERON:0003528!8.77e-08!34;UBERON:0002619!1.16e-07!22;UBERON:0003080!2.51e-07!42;UBERON:0007023!5.27e-07!115;UBERON:0001950!5.36e-07!20;UBERON:0000956!8.59e-07!25;UBERON:0000203!8.59e-07!25;UBERON:0000073!9.20e-07!94;UBERON:0001016!9.20e-07!94;UBERON:0002050!9.66e-07!605;UBERON:0005423!9.66e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.37e-08;34!UBERON:0002619;1.15e-07;22!UBERON:0001869;1.57e-07;32!UBERON:0002791;3.09e-07;32!UBERON:0001950;5.31e-07;20!UBERON:0000956;8.61e-07;25!UBERON:0000203;8.61e-07;25!UBERON:0003528;8.67e-07;34!UBERON:0002020;8.67e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000955,1.09e-10,68;UBERON:0006238,1.09e-10,68;UBERON:0000073,1.76e-10,53;UBERON:0002616,1.76e-10,53;UBERON:0004111,6.68e-10,240;UBERON:0001049,6.96e-10,56;UBERON:0005068,6.96e-10,56;UBERON:0006241,6.96e-10,56;UBERON:0007135,6.96e-10,56;UBERON:0003075,8.69e-10,82;UBERON:0007284,8.69e-10,82;UBERON:0000025,1.66e-09,192;UBERON:0002346,3.44e-09,86;UBERON:0010314,6.28e-09,132;UBERON:0000119,7.80e-09,309;UBERON:0001893,8.08e-09,34;UBERON:0001017,2.35e-08,81;UBERON:0001869,2.38e-08,32;UBERON:0003056,2.55e-08,61;UBERON:0000483,3.25e-08,306;UBERON:0002780,5.80e-08,41;UBERON:0001890,5.80e-08,41;UBERON:0003080,5.80e-08,41;UBERON:0006240,5.80e-08,41;UBERON:0002791,6.71e-08,32;UBERON:0003528,8.77e-08,34;UBERON:0002020,8.77e-08,34;UBERON:0002619,1.16e-07,22;UBERON:0001950,5.36e-07,20;UBERON:0000956,8.59e-07,25;UBERON:0000203,8.59e-07,25 | |||
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| |||
|short_description=p1@CBX6 | |||
}} |
Latest revision as of 17:14, 24 September 2015
Short description: | p1@CBX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CBX6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000216083, ENST00000469420, NM_014292, uc003awl.2, uc003awm.1_5end |
EntrezGene: | CBX6 |
HGNC: | 1556 |
UniProt: | B0QXZ6O95503 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brain | 1.09e-10 | 68 |
future brain | 1.09e-10 | 68 |
regional part of nervous system | 1.76e-10 | 53 |
regional part of brain | 1.76e-10 | 53 |
anatomical conduit | 6.68e-10 | 240 |
neural tube | 6.96e-10 | 56 |
neural rod | 6.96e-10 | 56 |
future spinal cord | 6.96e-10 | 56 |
neural keel | 6.96e-10 | 56 |
neural plate | 8.69e-10 | 82 |
presumptive neural plate | 8.69e-10 | 82 |
tube | 1.66e-09 | 192 |
neurectoderm | 3.44e-09 | 86 |
structure with developmental contribution from neural crest | 6.28e-09 | 132 |
cell layer | 7.80e-09 | 309 |
telencephalon | 8.08e-09 | 34 |
central nervous system | 2.35e-08 | 81 |
cerebral hemisphere | 2.38e-08 | 32 |
pre-chordal neural plate | 2.55e-08 | 61 |
epithelium | 3.25e-08 | 306 |
regional part of forebrain | 5.80e-08 | 41 |
forebrain | 5.80e-08 | 41 |
anterior neural tube | 5.80e-08 | 41 |
future forebrain | 5.80e-08 | 41 |
regional part of telencephalon | 6.71e-08 | 32 |
brain grey matter | 8.77e-08 | 34 |
gray matter | 8.77e-08 | 34 |
regional part of cerebral cortex | 1.16e-07 | 22 |
neocortex | 5.36e-07 | 20 |
cerebral cortex | 8.59e-07 | 25 |
pallium | 8.59e-07 | 25 |