FFCP PHASE1:Hg19::chr7:99613237..99613248,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:99613237..99613248,+
|short_description=p3@ZKSCAN1
|description=CAGE_peak_3_at_ZKSCAN1_5end
|association_with_transcript=11bp_to_ENST00000535170_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7586 | |EntrezGene=7586 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13101 | |HGNC=13101 | ||
|TSSclassifier=strong | |||
|UniProt=B3KRF7 | |UniProt=B3KRF7 | ||
|association_with_transcript=11bp_to_ENST00000535170_5end | |||
|cluster_id=chr7:99613237..99613248,+ | |||
|description=CAGE_peak_3_at_ZKSCAN1_5end | |||
|id=chr7:99613237..99613248,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.07e-08!42 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.53e-10;33!CL:0002057;3.53e-10;33!CL:0000473;7.21e-07;39!CL:0000234;7.21e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.10e-09,42;CL:0002057,7.10e-09,42;CL:0000473,2.19e-07,48;CL:0000234,2.19e-07,48 | |||
|ontology_enrichment_development_v019=CL:0002057;2.96e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.23e-10!57;UBERON:0005068!5.23e-10!57;UBERON:0006241!5.23e-10!57;UBERON:0007135!5.23e-10!57;UBERON:0000062!5.73e-09!511;UBERON:0002780!6.45e-09!41;UBERON:0001890!6.45e-09!41;UBERON:0006240!6.45e-09!41;UBERON:0002616!1.51e-08!59;UBERON:0003080!1.54e-08!42;UBERON:0000467!3.23e-08!625;UBERON:0003075!4.70e-08!86;UBERON:0007284!4.70e-08!86;UBERON:0000468!4.78e-08!659;UBERON:0000480!5.07e-08!626;UBERON:0001893!9.08e-08!34;UBERON:0000955!1.13e-07!69;UBERON:0006238!1.13e-07!69;UBERON:0002020!1.40e-07!34;UBERON:0003528!1.40e-07!34;UBERON:0003056!1.65e-07!61;UBERON:0002791!1.82e-07!33;UBERON:0000033!2.06e-07!123;UBERON:0004121!4.18e-07!169;UBERON:0001017!4.86e-07!82;UBERON:0001869!4.92e-07!32;UBERON:0005743!5.55e-07!86;UBERON:0002619!8.70e-07!22;UBERON:0000153!9.49e-07!129;UBERON:0007811!9.49e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;6.61e-07;22!UBERON:0002780;8.44e-07;41!UBERON:0001890;8.44e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.94e-10,56;UBERON:0005068,1.94e-10,56;UBERON:0006241,1.94e-10,56;UBERON:0007135,1.94e-10,56;UBERON:0000073,1.20e-09,53;UBERON:0002616,1.20e-09,53;UBERON:0010371,3.39e-09,104;UBERON:0002780,7.58e-09,41;UBERON:0001890,7.58e-09,41;UBERON:0003080,7.58e-09,41;UBERON:0006240,7.58e-09,41;UBERON:0003075,7.64e-09,82;UBERON:0007284,7.64e-09,82;UBERON:0000955,6.23e-08,68;UBERON:0006238,6.23e-08,68;UBERON:0001893,8.83e-08,34;UBERON:0003528,1.40e-07,34;UBERON:0002020,1.40e-07,34;UBERON:0001017,1.48e-07,81;UBERON:0002346,1.62e-07,86;UBERON:0003056,2.09e-07,61;UBERON:0000923,2.49e-07,560;UBERON:0010316,2.49e-07,560;UBERON:0005291,2.49e-07,560;UBERON:0006598,2.49e-07,560;UBERON:0010317,2.49e-07,560;UBERON:0002532,2.49e-07,560;UBERON:0002050,4.18e-07,564;UBERON:0002619,4.57e-07,22;UBERON:0001869,5.52e-07,32;UBERON:0002791,5.56e-07,32 | |||
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| ||
|short_description=p3@ZKSCAN1 | |||
}} | }} |
Latest revision as of 16:52, 24 September 2015
Short description: | p3@ZKSCAN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ZKSCAN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 11bp_to_ENST00000535170_5end |
EntrezGene: | ZKSCAN1 |
HGNC: | 13101 |
UniProt: | B3KRF7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.10e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.10e-09 | 42 |
defensive cell | 2.19e-07 | 48 |
phagocyte | 2.19e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
neural tube | 1.94e-10 | 56 |
neural rod | 1.94e-10 | 56 |
future spinal cord | 1.94e-10 | 56 |
neural keel | 1.94e-10 | 56 |
regional part of nervous system | 1.20e-09 | 53 |
regional part of brain | 1.20e-09 | 53 |
ecto-epithelium | 3.39e-09 | 104 |
regional part of forebrain | 7.58e-09 | 41 |
forebrain | 7.58e-09 | 41 |
anterior neural tube | 7.58e-09 | 41 |
future forebrain | 7.58e-09 | 41 |
neural plate | 7.64e-09 | 82 |
presumptive neural plate | 7.64e-09 | 82 |
brain | 6.23e-08 | 68 |
future brain | 6.23e-08 | 68 |
telencephalon | 8.83e-08 | 34 |
brain grey matter | 1.40e-07 | 34 |
gray matter | 1.40e-07 | 34 |
central nervous system | 1.48e-07 | 81 |
neurectoderm | 1.62e-07 | 86 |
pre-chordal neural plate | 2.09e-07 | 61 |
germ layer | 2.49e-07 | 560 |
germ layer / neural crest | 2.49e-07 | 560 |
embryonic tissue | 2.49e-07 | 560 |
presumptive structure | 2.49e-07 | 560 |
germ layer / neural crest derived structure | 2.49e-07 | 560 |
epiblast (generic) | 2.49e-07 | 560 |
embryonic structure | 4.18e-07 | 564 |
regional part of cerebral cortex | 4.57e-07 | 22 |
cerebral hemisphere | 5.52e-07 | 32 |
regional part of telencephalon | 5.56e-07 | 32 |