FFCP PHASE1:Hg19::chr12:7170229..7170249,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:7170229..7170249,+
|short_description=p10@C1S
|description=CAGE_peak_10_at_C1S_5end
|association_with_transcript=0bp_to_AK025309_5end
|EntrezGene=716
|H...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=716 | |EntrezGene=716 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1247 | |HGNC=1247 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AK025309_5end | |||
|cluster_id=chr12:7170229..7170249,+ | |||
|coexpression_cluster_id=C424 | |||
|description=CAGE_peak_10_at_C1S_5end | |||
|id=chr12:7170229..7170249,+ | |||
|ontology_enrichment_celltype=CL:0000136!3.40e-09!15;CL:0000055!3.38e-08!180;CL:0000057!2.31e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0002615;5.94e-12;3!CL:0000136;6.72e-10;13!CL:0002593;1.20e-08;2!CL:0002617;2.68e-08;2!CL:0000499;9.93e-08;28!CL:0000153;2.18e-07;9!CL:0000447;2.18e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,5.97e-12,3;CL:0000136,2.32e-11,15;CL:0002593,1.99e-08,2;CL:0002617,3.25e-08,2;CL:0000499,9.48e-08,28;CL:0000153,2.04e-07,9;CL:0000447,2.04e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004458!9.08e-10!49;UBERON:0004457!6.64e-09!12;UBERON:0000042!6.64e-09!12;UBERON:0002323!1.06e-08!46;UBERON:0002100!8.19e-08!216;UBERON:0003688!1.26e-07!6;UBERON:0002358!1.26e-07!6;UBERON:0003684!1.26e-07!6;UBERON:0001178!1.26e-07!6;UBERON:0005256!9.24e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;3.98e-15;9!UBERON:0000042;3.98e-15;9!UBERON:0003688;2.01e-10;6!UBERON:0002358;2.01e-10;6!UBERON:0003684;2.01e-10;6!UBERON:0001178;2.01e-10;6!UBERON:0002456;1.20e-08;2!UBERON:0003101;1.33e-07;22!UBERON:0000079;1.33e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004457,8.37e-15,12;UBERON:0000042,8.37e-15,12;UBERON:0003688,2.40e-10,6;UBERON:0002358,2.40e-10,6;UBERON:0003684,2.40e-10,6;UBERON:0001178,2.40e-10,6;UBERON:0002456,1.99e-08,2;UBERON:0003101,9.23e-08,22;UBERON:0000079,9.23e-08,22;UBERON:0004458,3.05e-07,49;UBERON:0002417,7.97e-07,60;UBERON:0000916,7.97e-07,60 | |||
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| ||
|short_description=p10@C1S | |||
}} | }} |
Latest revision as of 16:51, 24 September 2015
Short description: | p10@C1S |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_C1S_5end |
Coexpression cluster: | C424_Hepatocyte_liver_Synoviocyte_tenocyte_Fibroblast_Adipocyte_Cardiac |
Association with transcript: | 0bp_to_AK025309_5end |
EntrezGene: | C1S |
HGNC: | 1247 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 5.97e-12 | 3 |
fat cell | 2.32e-11 | 15 |
smooth muscle cell of the internal thoracic artery | 1.99e-08 | 2 |
adipocyte of breast | 3.25e-08 | 2 |
stromal cell | 9.48e-08 | 28 |
GAG secreting cell | 2.04e-07 | 9 |
carbohydrate secreting cell | 2.04e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cavity lining | 8.37e-15 | 12 |
serous membrane | 8.37e-15 | 12 |
omentum | 2.40e-10 | 6 |
peritoneum | 2.40e-10 | 6 |
abdominal cavity | 2.40e-10 | 6 |
visceral peritoneum | 2.40e-10 | 6 |
internal thoracic artery | 1.99e-08 | 2 |
male organism | 9.23e-08 | 22 |
male reproductive system | 9.23e-08 | 22 |
body cavity or lining | 3.05e-07 | 49 |
abdominal segment of trunk | 7.97e-07 | 60 |
abdomen | 7.97e-07 | 60 |