FFCP PHASE1:Hg19::chr12:7169832..7169844,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=716 | |EntrezGene=716 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1247 | |HGNC=1247 | ||
|TSSclassifier=strong | |||
|UniProt=F5H7T4 | |UniProt=F5H7T4 | ||
|association_with_transcript=-42bp_to_ENST00000542978_5end | |association_with_transcript=-42bp_to_ENST00000542978_5end | ||
|cluster_id=chr12:7169832..7169844,+ | |||
|coexpression_cluster_id=C424 | |coexpression_cluster_id=C424 | ||
|description=CAGE_peak_8_at_C1S_5end | |description=CAGE_peak_8_at_C1S_5end | ||
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|ontology_enrichment_celltype=CL:0000057!3.58e-08!75;CL:0000055!1.75e-07!180 | |ontology_enrichment_celltype=CL:0000057!3.58e-08!75;CL:0000055!1.75e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0000135;5.19e-10;3!CL:0000388;5.19e-10;3!CL:0000499;1.15e-08;28!CL:0000153;3.48e-08;9!CL:0000447;3.48e-08;9!CL:0000197;2.28e-07;6!CL:0000098;2.28e-07;6!CL:0002167;2.28e-07;6!CL:0002593;3.25e-07;2!CL:0000136;4.71e-07;13 | |ontology_enrichment_celltype_v019=CL:0000135;5.19e-10;3!CL:0000388;5.19e-10;3!CL:0000499;1.15e-08;28!CL:0000153;3.48e-08;9!CL:0000447;3.48e-08;9!CL:0000197;2.28e-07;6!CL:0000098;2.28e-07;6!CL:0002167;2.28e-07;6!CL:0002593;3.25e-07;2!CL:0000136;4.71e-07;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000135,4.86e-10,3;CL:0000388,4.86e-10,3;CL:0000499,1.41e-08,28;CL:0000153,4.13e-08,9;CL:0000447,4.13e-08,9;CL:0000136,6.59e-08,15;CL:0000197,3.29e-07,6;CL:0000098,3.29e-07,6;CL:0002167,3.29e-07,6;CL:0002593,3.46e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!2.45e-07!14 | |ontology_enrichment_disease=DOID:2394!2.45e-07!14 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!5.60e-07!216;UBERON:0005256!6.52e-07!143 | |ontology_enrichment_uberon=UBERON:0002100!5.60e-07!216;UBERON:0005256!6.52e-07!143 | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;5.19e-10;3!UBERON:0000043;5.19e-10;3!UBERON:0007845;5.19e-10;3!UBERON:0004457;3.40e-08;9!UBERON:0000042;3.40e-08;9!UBERON:0002456;3.25e-07;2!UBERON:0005904;9.06e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0007846;5.19e-10;3!UBERON:0000043;5.19e-10;3!UBERON:0007845;5.19e-10;3!UBERON:0004457;3.40e-08;9!UBERON:0000042;3.40e-08;9!UBERON:0002456;3.25e-07;2!UBERON:0005904;9.06e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,4.86e-10,3;UBERON:0000043,4.86e-10,3;UBERON:0007845,4.86e-10,3;UBERON:0002456,3.46e-07,2;UBERON:0005904,7.13e-07,4;UBERON:0003101,9.09e-07,22;UBERON:0000079,9.09e-07,22 | |||
|phase1_expression=0.726713517082227,1.07050261945492,0.704772020479856,3.00219895059391,3.12872766099101,1.74467704820074,0,1.26343974685366,1.04474251279935,0,0,0,0,0.37129905888014,0,1.34465029290355,1.80808358407193,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,1.0843174571537,0,2.31754430337318,0.795285947051099,6.32625331393427,0.0945348171640679,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633152558322899,0.132409180813219,4.87622255272983,0.709336764396714,2.24271040056923,0,0.24666754841716,0,0.269421344139376,0.163461903113459,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0.206651562351531,1.18800285728205,2.47266929278557,0,0,0,0,0,0.438977620880838,0.30648779579902,2.70428506031874,0,0,0,0.635795703478686,0.300091096084402,0.309157587715317,0.515281080091258,0.18611685633159,0,0.292311015483596,0.252433774244115,0.552299391853796,2.42469085228218,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,1.56449532329816,0.643240938192885,0,0.464367928031979,1.44375896333917,0,0,0,0.441175890929576,0,0.474541238222193,0.134831308160164,0,0,0,0,0,0,24.0834566161479,18.6737171168749,8.27105869353966,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0,0.531876233169741,0,0,0,0,1.85871391755592,0,0,0.65147236858747,1.42156779497018,0,1.80863626235752,0.871533458600294,0.899756920638513,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,1.00034104211935,0.271265023699736,1.03985430765404,2.14114786556594,1.57702415033935,1.17141414992713,0,0,0,0,0,0.868836144680828,0,0.343143423810856,0,0,0,0,0,0,0.496215615637554,0.460385919864187,1.40330047216537,0.384417447767103,1.02341449813341,0,0,0.154209693802656,0.177561725313127,0.0821271560138091,2.07701771673448,0.697262270759755,0,0,0,1.03333003348146,0.910455840033585,3.67148361886388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,2.26690225624989,0,0,0,0,3.21367859688319,0,0.154048617114644,0.15350367472613,0.275673144969061,0.322260734604821,1.0151168573996,0.255679882248303,0.356128142586949,0,0,0,0.10115778085555,0.464845549297286,0.62962469366128,0,0.616067160352178,0,0,0,0,0,0.316379424718726,0.571890581771475,0.255897791311334,0.42793898803392,0.318203247925937,0,0.179872457583315,1.64722217841633,0.235624804691373,0,0,0,0,6.09283724078211,3.16950440270266,0.136499911407986,2.96951407102797,0,0,0,0.438450885253763,0,1.31178950409327,0,0,0,0,0.294747123039363,0,0,9.07762831779956,9.87884678879706,0,0,0,0,0,1.69458841398202,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0,0,0,0,0,0,0,0,0,0.996239941255349,0.276283915531148,0,0,0,0,0,0,0,0.887790650732402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0.21787692703798,0,0.769502585037971,0.455768223388005,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.265372693510018,0,0,0,0,0,0.802577647298789,0,0,0,0,1.18375320854817,0,0,1.01098527405581,0,0,0,0,0,0,0,0,0,0,0,1.92199335066233,0,0,0,0,0.581934098930517,0,1.35588444468319,0,0,0,0,0.240476460754601,1.28071796843612,0,0,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0.288950589901519,0,0,0,0.859530882839914,0,0.837847203816763,0,0.717873024576814,0,0,0.223171457441873,0,0.360299883542404,0,0,0,0,0,0,0,0.272406812223151,0,0,0.415440338029185,0,0,0,0,0.315222829196793,0.209818352539992,0,0.179287339332845,0,2.1440859791201,0,0,0.542999601753713,0,0.653174720218818,0,0,0,0,4.25001477666439,1.32506888912221,0,0.13223260174269,0,0,0.427149650270779,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0,0,0,0.1251909307065,0,0,0.124192805882767,0,0,0,0,0.235265819698172,0,0,0,0.467426619694449,0.554805861502613,0.757612021100357,1.76097531226803,2.66943366478961,0.686520205190771,2.57092570397506,0.932623203496683,0.887130899937803,0.63718706865481,0.899606224327209,0.465788870628778,0.414706207840855,0.797525143673985,0.521745061811734,2.10360652596106,0.761610424337591,0.813741466409323,0.363697318405119,0.537052785212442,0,0.796191777397232,0,1.37358282073117,0.673498977531838,0,0,0,0,0.906823702049089,0,0.734210113519403,0,0.617602894321944,0.877136198314828,0,0,1.18259708457151,0,0,0,0.276516872303462,0,0,0,0.327609848846413,4.42391235756695,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,7.34989145647681,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,1.27857558193737,0,0,0,0.163771917510097,0,0,0,0,0,0,0,1.98484471355718,0,0,0,0,0,0,0.266107110487916,0.115233987555779,0.342976018874837,0,0,0,0,0.39246546425257,0,0,0,0,0,0.357382720883282,0,0,0,1.60342272946051,0,0,0.691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| ||
|short_description=p8@C1S | |short_description=p8@C1S | ||
}} | }} |
Latest revision as of 16:49, 24 September 2015
Short description: | p8@C1S |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_C1S_5end |
Coexpression cluster: | C424_Hepatocyte_liver_Synoviocyte_tenocyte_Fibroblast_Adipocyte_Cardiac |
Association with transcript: | -42bp_to_ENST00000542978_5end |
EntrezGene: | C1S |
HGNC: | 1247 |
UniProt: | F5H7T4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 4.86e-10 | 3 |
tendon cell | 4.86e-10 | 3 |
stromal cell | 1.41e-08 | 28 |
GAG secreting cell | 4.13e-08 | 9 |
carbohydrate secreting cell | 4.13e-08 | 9 |
fat cell | 6.59e-08 | 15 |
receptor cell | 3.29e-07 | 6 |
sensory epithelial cell | 3.29e-07 | 6 |
olfactory epithelial cell | 3.29e-07 | 6 |
smooth muscle cell of the internal thoracic artery | 3.46e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 4.86e-10 | 3 |
tendon | 4.86e-10 | 3 |
regular connective tissue | 4.86e-10 | 3 |
internal thoracic artery | 3.46e-07 | 2 |
duct of male reproductive system | 7.13e-07 | 4 |
male organism | 9.09e-07 | 22 |
male reproductive system | 9.09e-07 | 22 |