FFCP PHASE1:Hg19::chr7:994302..994329,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:994302..994329,-
|short_description=p1@ADAP1
|description=CAGE_peak_1_at_ADAP1_5end
|association_with_transcript=0bp_to_uc003sjo.3_5end
|EntrezGene=11033
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11033 | |EntrezGene=11033 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16486 | |HGNC=16486 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc003sjo.3_5end | |||
|cluster_id=chr7:994302..994329,- | |||
|description=CAGE_peak_1_at_ADAP1_5end | |||
|id=chr7:994302..994329,- | |||
|ontology_enrichment_celltype=CL:0000766!3.07e-29!76;CL:0000557!4.08e-26!71;CL:0002057!1.01e-24!42;CL:0002009!1.20e-24!65;CL:0002194!1.60e-24!63;CL:0000576!1.60e-24!63;CL:0000040!1.60e-24!63;CL:0000559!1.60e-24!63;CL:0000763!2.49e-24!112;CL:0000049!2.49e-24!112;CL:0000839!7.70e-24!70;CL:0000860!1.50e-22!45;CL:0000738!4.40e-22!140;CL:0000037!7.19e-20!172;CL:0000566!7.19e-20!172;CL:0002032!1.25e-19!165;CL:0000837!1.25e-19!165;CL:0000988!5.37e-19!182;CL:0002087!1.74e-17!119;CL:0002031!9.88e-17!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.30e-18;33!CL:0002057;3.30e-18;33!CL:0000576;2.48e-17;48!CL:0000473;1.91e-16;39!CL:0000234;1.91e-16;39!CL:0000766;3.23e-14;69!CL:0000763;1.45e-08;100!CL:0002087;4.51e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.08e-31,72;CL:0000557,2.01e-28,67;CL:0002009,5.62e-27,61;CL:0002194,6.78e-27,59;CL:0000576,6.78e-27,59;CL:0000040,6.78e-27,59;CL:0000559,6.78e-27,59;CL:0000473,1.22e-26,48;CL:0000234,1.22e-26,48;CL:0000763,4.01e-26,108;CL:0000049,4.01e-26,108;CL:0000839,1.43e-25,66;CL:0000860,2.70e-25,42;CL:0002057,2.70e-25,42;CL:0000738,7.49e-24,136;CL:0000037,1.72e-21,168;CL:0002032,3.61e-21,161;CL:0000837,3.61e-21,161;CL:0000988,6.94e-21,177;CL:0002087,5.67e-19,115;CL:0002031,7.10e-18,120;CL:0002393,8.62e-07,9;CL:0002397,8.62e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.84e-18;42!CL:0000049;1.01e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.50e-23!102;UBERON:0003061!1.50e-23!102;UBERON:0002193!5.82e-21!112;UBERON:0002371!2.68e-19!80;UBERON:0001474!1.20e-18!86;UBERON:0001049!5.59e-15!57;UBERON:0005068!5.59e-15!57;UBERON:0006241!5.59e-15!57;UBERON:0007135!5.59e-15!57;UBERON:0002405!2.76e-14!115;UBERON:0007023!6.07e-14!115;UBERON:0001893!7.60e-13!34;UBERON:0002020!8.91e-13!34;UBERON:0003528!8.91e-13!34;UBERON:0004765!1.22e-12!101;UBERON:0001434!1.22e-12!101;UBERON:0002780!1.48e-12!41;UBERON:0001890!1.48e-12!41;UBERON:0006240!1.48e-12!41;UBERON:0002791!2.86e-12!33;UBERON:0003080!4.38e-12!42;UBERON:0001869!1.32e-11!32;UBERON:0002619!1.65e-11!22;UBERON:0002616!1.40e-10!59;UBERON:0001950!1.43e-10!20;UBERON:0000955!1.95e-09!69;UBERON:0006238!1.95e-09!69;UBERON:0001017!3.49e-09!82;UBERON:0005743!7.06e-09!86;UBERON:0003075!1.33e-08!86;UBERON:0007284!1.33e-08!86;UBERON:0003081!1.83e-08!216;UBERON:0000956!1.99e-08!25;UBERON:0000203!1.99e-08!25;UBERON:0000073!5.12e-08!94;UBERON:0001016!5.12e-08!94;UBERON:0002346!7.53e-08!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.02e-11;22!UBERON:0001893;2.61e-11;34!UBERON:0003528;5.44e-11;34!UBERON:0002020;5.44e-11;34!UBERON:0001950;9.23e-11;20!UBERON:0002791;1.09e-10;32!UBERON:0001869;1.10e-10;32!UBERON:0002780;1.26e-09;41!UBERON:0001890;1.26e-09;41!UBERON:0000073;8.60e-09;53!UBERON:0002616;8.60e-09;53!UBERON:0000956;1.18e-08;25!UBERON:0000203;1.18e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.23e-25,98;UBERON:0003061,6.23e-25,98;UBERON:0002193,4.40e-22,108;UBERON:0002371,1.04e-20,76;UBERON:0001474,6.10e-20,82;UBERON:0002405,5.64e-17,93;UBERON:0004765,3.84e-16,90;UBERON:0001049,9.33e-16,56;UBERON:0005068,9.33e-16,56;UBERON:0006241,9.33e-16,56;UBERON:0007135,9.33e-16,56;UBERON:0000073,2.41e-14,53;UBERON:0002616,2.41e-14,53;UBERON:0007023,1.80e-13,114;UBERON:0001893,3.22e-13,34;UBERON:0003528,3.79e-13,34;UBERON:0002020,3.79e-13,34;UBERON:0002780,9.31e-13,41;UBERON:0001890,9.31e-13,41;UBERON:0003080,9.31e-13,41;UBERON:0006240,9.31e-13,41;UBERON:0001434,2.21e-12,100;UBERON:0002791,5.46e-12,32;UBERON:0001869,6.02e-12,32;UBERON:0002619,9.38e-12,22;UBERON:0001950,8.62e-11,20;UBERON:0000955,9.50e-10,68;UBERON:0006238,9.50e-10,68;UBERON:0001017,1.85e-09,81;UBERON:0003081,8.87e-09,203;UBERON:0000956,1.10e-08,25;UBERON:0000203,1.10e-08,25;UBERON:0003075,1.13e-08,82;UBERON:0007284,1.13e-08,82;UBERON:0001016,1.21e-08,89;UBERON:0002346,7.14e-08,86 | |||
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| ||
|short_description=p1@ADAP1 | |||
}} | }} |
Latest revision as of 16:38, 24 September 2015
Short description: | p1@ADAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ADAP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc003sjo.3_5end |
EntrezGene: | ADAP1 |
HGNC: | 16486 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.08e-31 | 72 |
granulocyte monocyte progenitor cell | 2.01e-28 | 67 |
macrophage dendritic cell progenitor | 5.62e-27 | 61 |
monopoietic cell | 6.78e-27 | 59 |
monocyte | 6.78e-27 | 59 |
monoblast | 6.78e-27 | 59 |
promonocyte | 6.78e-27 | 59 |
defensive cell | 1.22e-26 | 48 |
phagocyte | 1.22e-26 | 48 |
myeloid cell | 4.01e-26 | 108 |
common myeloid progenitor | 4.01e-26 | 108 |
myeloid lineage restricted progenitor cell | 1.43e-25 | 66 |
classical monocyte | 2.70e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.70e-25 | 42 |
leukocyte | 7.49e-24 | 136 |
hematopoietic stem cell | 1.72e-21 | 168 |
hematopoietic oligopotent progenitor cell | 3.61e-21 | 161 |
hematopoietic multipotent progenitor cell | 3.61e-21 | 161 |
hematopoietic cell | 6.94e-21 | 177 |
nongranular leukocyte | 5.67e-19 | 115 |
hematopoietic lineage restricted progenitor cell | 7.10e-18 | 120 |
intermediate monocyte | 8.62e-07 | 9 |
CD14-positive, CD16-positive monocyte | 8.62e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.23e-25 | 98 |
blood island | 6.23e-25 | 98 |
hemolymphoid system | 4.40e-22 | 108 |
bone marrow | 1.04e-20 | 76 |
bone element | 6.10e-20 | 82 |
immune system | 5.64e-17 | 93 |
skeletal element | 3.84e-16 | 90 |
neural tube | 9.33e-16 | 56 |
neural rod | 9.33e-16 | 56 |
future spinal cord | 9.33e-16 | 56 |
neural keel | 9.33e-16 | 56 |
regional part of nervous system | 2.41e-14 | 53 |
regional part of brain | 2.41e-14 | 53 |
adult organism | 1.80e-13 | 114 |
telencephalon | 3.22e-13 | 34 |
brain grey matter | 3.79e-13 | 34 |
gray matter | 3.79e-13 | 34 |
regional part of forebrain | 9.31e-13 | 41 |
forebrain | 9.31e-13 | 41 |
anterior neural tube | 9.31e-13 | 41 |
future forebrain | 9.31e-13 | 41 |
skeletal system | 2.21e-12 | 100 |
regional part of telencephalon | 5.46e-12 | 32 |
cerebral hemisphere | 6.02e-12 | 32 |
regional part of cerebral cortex | 9.38e-12 | 22 |
neocortex | 8.62e-11 | 20 |
brain | 9.50e-10 | 68 |
future brain | 9.50e-10 | 68 |
central nervous system | 1.85e-09 | 81 |
lateral plate mesoderm | 8.87e-09 | 203 |
cerebral cortex | 1.10e-08 | 25 |
pallium | 1.10e-08 | 25 |
neural plate | 1.13e-08 | 82 |
presumptive neural plate | 1.13e-08 | 82 |
nervous system | 1.21e-08 | 89 |
neurectoderm | 7.14e-08 | 86 |