FFCP PHASE1:Hg19::chrX:20285113..20285175,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6197 | |EntrezGene=6197 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10432 | |HGNC=10432 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=42bp_to_ENST00000492128_5end | |association_with_transcript=42bp_to_ENST00000492128_5end | ||
|cluster_id=chrX:20285113..20285175,- | |||
|description=CAGE_peak_2_at_RPS6KA3_5end | |description=CAGE_peak_2_at_RPS6KA3_5end | ||
|id=chrX:20285113..20285175,- | |id=chrX:20285113..20285175,- | ||
|ontology_enrichment_celltype=CL:0000766!1.71e-15!76;CL:0000763!1.07e-13!112;CL:0000049!1.07e-13!112;CL:0000839!3.52e-13!70;CL:0000557!7.53e-13!71;CL:0002194!3.68e-11!63;CL:0000576!3.68e-11!63;CL:0000040!3.68e-11!63;CL:0000559!3.68e-11!63;CL:0000860!7.27e-11!45;CL:0002009!1.22e-10!65;CL:0002057!2.78e-10!42;CL:0000037!2.15e-07!172;CL:0000566!2.15e-07!172;CL:0002032!4.43e-07!165;CL:0000837!4.43e-07!165;CL:0000738!5.88e-07!140 | |ontology_enrichment_celltype=CL:0000766!1.71e-15!76;CL:0000763!1.07e-13!112;CL:0000049!1.07e-13!112;CL:0000839!3.52e-13!70;CL:0000557!7.53e-13!71;CL:0002194!3.68e-11!63;CL:0000576!3.68e-11!63;CL:0000040!3.68e-11!63;CL:0000559!3.68e-11!63;CL:0000860!7.27e-11!45;CL:0002009!1.22e-10!65;CL:0002057!2.78e-10!42;CL:0000037!2.15e-07!172;CL:0000566!2.15e-07!172;CL:0002032!4.43e-07!165;CL:0000837!4.43e-07!165;CL:0000738!5.88e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.90e-08;33!CL:0002057;4.90e-08;33!CL:0000473;1.69e-07;39!CL:0000234;1.69e-07;39!CL:0000576;4.13e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.46e-14,72;CL:0000763,8.11e-13,108;CL:0000049,8.11e-13,108;CL:0000839,2.84e-12,66;CL:0000557,6.00e-12,67;CL:0000473,9.91e-11,48;CL:0000234,9.91e-11,48;CL:0000860,2.78e-10,42;CL:0002057,2.78e-10,42;CL:0002194,2.81e-10,59;CL:0000576,2.81e-10,59;CL:0000040,2.81e-10,59;CL:0000559,2.81e-10,59;CL:0002009,9.06e-10,61;CL:0000037,9.22e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;2.66e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.36e-29!115;UBERON:0002390!2.54e-14!102;UBERON:0003061!2.54e-14!102;UBERON:0002371!1.31e-11!80;UBERON:0002193!2.33e-11!112;UBERON:0001474!3.57e-11!86;UBERON:0004765!7.76e-11!101;UBERON:0001434!7.76e-11!101;UBERON:0000062!2.19e-09!511;UBERON:0002405!2.82e-09!115;UBERON:0001049!2.75e-07!57;UBERON:0005068!2.75e-07!57;UBERON:0006241!2.75e-07!57;UBERON:0007135!2.75e-07!57;UBERON:0002780!4.26e-07!41;UBERON:0001890!4.26e-07!41;UBERON:0006240!4.26e-07!41;UBERON:0003080!9.86e-07!42 | |ontology_enrichment_uberon=UBERON:0007023!1.36e-29!115;UBERON:0002390!2.54e-14!102;UBERON:0003061!2.54e-14!102;UBERON:0002371!1.31e-11!80;UBERON:0002193!2.33e-11!112;UBERON:0001474!3.57e-11!86;UBERON:0004765!7.76e-11!101;UBERON:0001434!7.76e-11!101;UBERON:0000062!2.19e-09!511;UBERON:0002405!2.82e-09!115;UBERON:0001049!2.75e-07!57;UBERON:0005068!2.75e-07!57;UBERON:0006241!2.75e-07!57;UBERON:0007135!2.75e-07!57;UBERON:0002780!4.26e-07!41;UBERON:0001890!4.26e-07!41;UBERON:0006240!4.26e-07!41;UBERON:0003080!9.86e-07!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;4.88e-08;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.77e-29,114;UBERON:0002390,2.01e-13,98;UBERON:0003061,2.01e-13,98;UBERON:0002371,9.70e-11,76;UBERON:0002193,1.55e-10,108;UBERON:0001474,2.54e-10,82;UBERON:0001434,6.26e-10,100;UBERON:0004765,1.99e-09,90;UBERON:0002405,9.12e-08,93;UBERON:0001049,1.32e-07,56;UBERON:0005068,1.32e-07,56;UBERON:0006241,1.32e-07,56;UBERON:0007135,1.32e-07,56;UBERON:0000073,2.49e-07,53;UBERON:0002616,2.49e-07,53;UBERON:0002780,4.26e-07,41;UBERON:0001890,4.26e-07,41;UBERON:0003080,4.26e-07,41;UBERON:0006240,4.26e-07,41 | |||
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| ||
|short_description=p2@RPS6KA3 | |short_description=p2@RPS6KA3 | ||
}} | }} |
Latest revision as of 16:30, 24 September 2015
Short description: | p2@RPS6KA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RPS6KA3_5end |
Coexpression cluster: | NA |
Association with transcript: | 42bp_to_ENST00000492128_5end |
EntrezGene: | RPS6KA3 |
HGNC: | 10432 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.46e-14 | 72 |
myeloid cell | 8.11e-13 | 108 |
common myeloid progenitor | 8.11e-13 | 108 |
myeloid lineage restricted progenitor cell | 2.84e-12 | 66 |
granulocyte monocyte progenitor cell | 6.00e-12 | 67 |
defensive cell | 9.91e-11 | 48 |
phagocyte | 9.91e-11 | 48 |
classical monocyte | 2.78e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.78e-10 | 42 |
monopoietic cell | 2.81e-10 | 59 |
monocyte | 2.81e-10 | 59 |
monoblast | 2.81e-10 | 59 |
promonocyte | 2.81e-10 | 59 |
macrophage dendritic cell progenitor | 9.06e-10 | 61 |
hematopoietic stem cell | 9.22e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.77e-29 | 114 |
hematopoietic system | 2.01e-13 | 98 |
blood island | 2.01e-13 | 98 |
bone marrow | 9.70e-11 | 76 |
hemolymphoid system | 1.55e-10 | 108 |
bone element | 2.54e-10 | 82 |
skeletal system | 6.26e-10 | 100 |
skeletal element | 1.99e-09 | 90 |
immune system | 9.12e-08 | 93 |
neural tube | 1.32e-07 | 56 |
neural rod | 1.32e-07 | 56 |
future spinal cord | 1.32e-07 | 56 |
neural keel | 1.32e-07 | 56 |
regional part of nervous system | 2.49e-07 | 53 |
regional part of brain | 2.49e-07 | 53 |
regional part of forebrain | 4.26e-07 | 41 |
forebrain | 4.26e-07 | 41 |
anterior neural tube | 4.26e-07 | 41 |
future forebrain | 4.26e-07 | 41 |