FFCP PHASE1:Hg19::chr22:39096925..39096954,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9929 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28953 | |||
|TSSclassifier=strong | |||
|UniProt=B0QY57,B0QY58 | |||
|association_with_transcript=0bp_to_ENST00000412832,ENST00000456626,ENST00000493939_5end | |||
|cluster_id=chr22:39096925..39096954,- | |||
|coexpression_cluster_id=C1295 | |||
|description=CAGE_peak_1_at_JOSD1_5end | |||
|id=chr22:39096925..39096954,- | |||
|ontology_enrichment_celltype=CL:0000738!2.84e-19!140;CL:0002057!4.98e-18!42;CL:0002031!8.68e-15!124;CL:0000860!1.99e-14!45;CL:0002087!6.57e-13!119;CL:0000766!3.31e-12!76;CL:0000988!7.81e-11!182;CL:0000037!2.07e-10!172;CL:0000566!2.07e-10!172;CL:0002032!8.55e-10!165;CL:0000837!8.55e-10!165;CL:0000557!1.03e-09!71;CL:0000839!6.26e-09!70;CL:0002009!5.78e-08!65;CL:0002194!2.76e-07!63;CL:0000576!2.76e-07!63;CL:0000040!2.76e-07!63;CL:0000559!2.76e-07!63;CL:0000791!5.32e-07!18;CL:0000789!5.32e-07!18;CL:0002420!5.32e-07!18;CL:0002419!5.32e-07!18;CL:0000790!5.32e-07!18;CL:0000084!7.01e-07!25;CL:0000827!7.01e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.93e-15;33!CL:0002057;4.93e-15;33!CL:0000473;1.56e-11;39!CL:0000234;1.56e-11;39!CL:0000766;1.59e-08;69!CL:0000576;1.77e-07;48!CL:0000791;6.81e-07;18!CL:0000789;6.81e-07;18!CL:0002419;6.81e-07;18!CL:0000084;9.04e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.86e-21,136;CL:0000860,4.98e-18,42;CL:0002057,4.98e-18,42;CL:0000473,8.54e-17,48;CL:0000234,8.54e-17,48;CL:0002031,1.34e-16,120;CL:0002087,1.31e-14,115;CL:0000766,2.18e-14,72;CL:0000988,6.83e-12,177;CL:0000557,1.16e-11,67;CL:0000037,1.32e-11,168;CL:0002032,5.70e-11,161;CL:0000837,5.70e-11,161;CL:0000839,8.74e-11,66;CL:0002009,9.20e-10,61;CL:0002194,5.23e-09,59;CL:0000576,5.23e-09,59;CL:0000040,5.23e-09,59;CL:0000559,5.23e-09,59;CL:0000791,5.32e-07,18;CL:0000789,5.32e-07,18;CL:0002420,5.32e-07,18;CL:0002419,5.32e-07,18;CL:0000790,5.32e-07,18;CL:0000084,7.01e-07,25;CL:0000827,7.01e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002057;1.58e-13;42!CL:0000790;6.81e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.54e-09!80;UBERON:0002390!1.01e-08!102;UBERON:0003061!1.01e-08!102;UBERON:0002193!2.17e-08!112;UBERON:0003081!5.16e-08!216;UBERON:0001474!7.47e-08!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.56e-11,76;UBERON:0002390,3.68e-10,98;UBERON:0003061,3.68e-10,98;UBERON:0002405,1.00e-09,93;UBERON:0002193,1.03e-09,108;UBERON:0001474,2.43e-09,82;UBERON:0004765,4.19e-08,90;UBERON:0003081,2.98e-07,203 | |||
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| |||
|short_description=p1@JOSD1 | |||
}} |
Latest revision as of 16:16, 24 September 2015
Short description: | p1@JOSD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_JOSD1_5end |
Coexpression cluster: | C1295_Eosinophils_CD4_CD14_Neutrophils_CD8_Basophils_Mast |
Association with transcript: | 0bp_to_ENST00000412832, ENST00000456626, ENST00000493939_5end |
EntrezGene: | JOSD1 |
HGNC: | 28953 |
UniProt: | B0QY57B0QY58 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.86e-21 | 136 |
classical monocyte | 4.98e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.98e-18 | 42 |
defensive cell | 8.54e-17 | 48 |
phagocyte | 8.54e-17 | 48 |
hematopoietic lineage restricted progenitor cell | 1.34e-16 | 120 |
nongranular leukocyte | 1.31e-14 | 115 |
myeloid leukocyte | 2.18e-14 | 72 |
hematopoietic cell | 6.83e-12 | 177 |
granulocyte monocyte progenitor cell | 1.16e-11 | 67 |
hematopoietic stem cell | 1.32e-11 | 168 |
hematopoietic oligopotent progenitor cell | 5.70e-11 | 161 |
hematopoietic multipotent progenitor cell | 5.70e-11 | 161 |
myeloid lineage restricted progenitor cell | 8.74e-11 | 66 |
macrophage dendritic cell progenitor | 9.20e-10 | 61 |
monopoietic cell | 5.23e-09 | 59 |
monocyte | 5.23e-09 | 59 |
monoblast | 5.23e-09 | 59 |
promonocyte | 5.23e-09 | 59 |
mature alpha-beta T cell | 5.32e-07 | 18 |
alpha-beta T cell | 5.32e-07 | 18 |
immature T cell | 5.32e-07 | 18 |
mature T cell | 5.32e-07 | 18 |
immature alpha-beta T cell | 5.32e-07 | 18 |
T cell | 7.01e-07 | 25 |
pro-T cell | 7.01e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.56e-11 | 76 |
hematopoietic system | 3.68e-10 | 98 |
blood island | 3.68e-10 | 98 |
immune system | 1.00e-09 | 93 |
hemolymphoid system | 1.03e-09 | 108 |
bone element | 2.43e-09 | 82 |
skeletal element | 4.19e-08 | 90 |
lateral plate mesoderm | 2.98e-07 | 203 |