FFCP PHASE1:Hg19::chr2:219103536..219103550,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:219103536..219103550,+
|short_description=p2@ARPC2
|description=CAGE_peak_2_at_ARPC2_5end
|association_with_transcript=94bp_to_ENST00000462034_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10109 | |EntrezGene=10109 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=705 | |HGNC=705 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=94bp_to_ENST00000462034_5end | |||
|cluster_id=chr2:219103536..219103550,+ | |||
|description=CAGE_peak_2_at_ARPC2_5end | |||
|id=chr2:219103536..219103550,+ | |||
|ontology_enrichment_celltype=CL:0000003!6.01e-17!722;CL:0002371!2.36e-16!591;CL:0000144!3.93e-16!625;CL:0000723!7.07e-16!436;CL:0000034!1.46e-15!444;CL:0000048!2.39e-15!430;CL:0000548!5.80e-14!679;CL:0000004!5.80e-14!679;CL:0000255!5.80e-14!679;CL:0000012!3.09e-13!682;CL:0002057!7.74e-12!42;CL:0000134!1.89e-11!358;CL:0002009!1.93e-11!65;CL:0002194!2.44e-11!63;CL:0000576!2.44e-11!63;CL:0000040!2.44e-11!63;CL:0000559!2.44e-11!63;CL:0002320!3.51e-11!365;CL:0000860!1.04e-10!45;CL:0000063!1.59e-10!578;CL:0000219!8.83e-09!390;CL:0000557!2.35e-08!71;CL:0000839!5.08e-08!70;CL:0000766!5.64e-08!76 | |||
|ontology_enrichment_celltype_v019=CL:0000473;3.79e-12;39!CL:0000234;3.79e-12;39!CL:0000860;6.89e-12;33!CL:0002057;6.89e-12;33!CL:0000576;5.16e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,9.60e-17,433;CL:0000048,1.44e-16,427;CL:0000034,2.87e-16,441;CL:0000473,1.20e-15,48;CL:0000234,1.20e-15,48;CL:0002009,2.07e-13,61;CL:0002194,2.69e-13,59;CL:0000576,2.69e-13,59;CL:0000040,2.69e-13,59;CL:0000559,2.69e-13,59;CL:0000860,3.65e-13,42;CL:0002057,3.65e-13,42;CL:0000134,1.75e-12,354;CL:0002320,3.89e-12,361;CL:0000557,1.31e-10,67;CL:0000839,4.73e-10,66;CL:0000766,6.21e-10,72;CL:0000219,2.62e-09,386;CL:0000763,4.31e-07,108;CL:0000049,4.31e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;2.79e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.61e-10!375;UBERON:0002204!5.96e-09!167;UBERON:0003081!1.09e-08!216;UBERON:0002371!1.79e-08!80;UBERON:0001474!2.72e-07!86;UBERON:0002390!3.29e-07!102;UBERON:0003061!3.29e-07!102;UBERON:0004765!4.67e-07!101;UBERON:0001434!4.67e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,2.68e-11,167;UBERON:0002384,4.77e-11,371;UBERON:0002371,5.83e-11,76;UBERON:0000926,1.13e-10,315;UBERON:0004120,1.13e-10,315;UBERON:0006603,1.13e-10,315;UBERON:0001474,6.49e-10,82;UBERON:0003081,2.55e-09,203;UBERON:0001434,4.54e-09,100;UBERON:0004765,6.75e-09,90;UBERON:0002390,3.92e-08,98;UBERON:0003061,3.92e-08,98;UBERON:0002405,5.12e-07,93;UBERON:0002193,7.86e-07,108 | |||
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| ||
|short_description=p2@ARPC2 | |||
}} | }} |
Latest revision as of 16:10, 24 September 2015
Short description: | p2@ARPC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ARPC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 94bp_to_ENST00000462034_5end |
EntrezGene: | ARPC2 |
HGNC: | 705 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 9.60e-17 | 433 |
multi fate stem cell | 1.44e-16 | 427 |
stem cell | 2.87e-16 | 441 |
defensive cell | 1.20e-15 | 48 |
phagocyte | 1.20e-15 | 48 |
macrophage dendritic cell progenitor | 2.07e-13 | 61 |
monopoietic cell | 2.69e-13 | 59 |
monocyte | 2.69e-13 | 59 |
monoblast | 2.69e-13 | 59 |
promonocyte | 2.69e-13 | 59 |
classical monocyte | 3.65e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.65e-13 | 42 |
mesenchymal cell | 1.75e-12 | 354 |
connective tissue cell | 3.89e-12 | 361 |
granulocyte monocyte progenitor cell | 1.31e-10 | 67 |
myeloid lineage restricted progenitor cell | 4.73e-10 | 66 |
myeloid leukocyte | 6.21e-10 | 72 |
motile cell | 2.62e-09 | 386 |
myeloid cell | 4.31e-07 | 108 |
common myeloid progenitor | 4.31e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 2.68e-11 | 167 |
connective tissue | 4.77e-11 | 371 |
bone marrow | 5.83e-11 | 76 |
mesoderm | 1.13e-10 | 315 |
mesoderm-derived structure | 1.13e-10 | 315 |
presumptive mesoderm | 1.13e-10 | 315 |
bone element | 6.49e-10 | 82 |
lateral plate mesoderm | 2.55e-09 | 203 |
skeletal system | 4.54e-09 | 100 |
skeletal element | 6.75e-09 | 90 |
hematopoietic system | 3.92e-08 | 98 |
blood island | 3.92e-08 | 98 |
immune system | 5.12e-07 | 93 |
hemolymphoid system | 7.86e-07 | 108 |