FFCP PHASE1:Hg19::chr7:99156249..99156311,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:99156249..99156311,+ to FFCP PHASE1:Hg19::chr7:99156249..99156311,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79027 | |EntrezGene=79027 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30899 | |HGNC=30899 | ||
|TSSclassifier=strong | |||
|UniProt=F8WDU5,C9JNK1 | |UniProt=F8WDU5,C9JNK1 | ||
|association_with_transcript=0bp_to_ENST00000423973,ENST00000449244,ENST00000486324,ENST00000493947_5end | |||
|cluster_id=chr7:99156249..99156311,+ | |||
|description=CAGE_peak_1_at_ZNF655_5end | |||
|id=chr7:99156249..99156311,+ | |||
|ontology_enrichment_celltype=CL:0002087!1.15e-19!119;CL:0000738!9.20e-18!140;CL:0002031!2.30e-15!124;CL:0000542!4.94e-15!53;CL:0000051!4.94e-15!53;CL:0000838!9.79e-15!52;CL:0002057!9.05e-14!42;CL:0000860!2.49e-11!45;CL:0000084!3.25e-11!25;CL:0000827!3.25e-11!25;CL:0000791!3.61e-11!18;CL:0000789!3.61e-11!18;CL:0002420!3.61e-11!18;CL:0002419!3.61e-11!18;CL:0000790!3.61e-11!18;CL:0000037!1.50e-08!172;CL:0000566!1.50e-08!172;CL:0000988!1.34e-07!182;CL:0000625!1.46e-07!11;CL:0002032!2.80e-07!165;CL:0000837!2.80e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.56e-11;18!CL:0000789;3.56e-11;18!CL:0002419;3.56e-11;18!CL:0000084;3.96e-11;25!CL:0000860;5.79e-11;33!CL:0002057;5.79e-11;33!CL:0000542;1.48e-09;53!CL:0002087;1.74e-08;104!CL:0000625;1.40e-07;11!CL:0000473;4.05e-07;39!CL:0000234;4.05e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,1.00e-21,115;CL:0000738,1.69e-19,136;CL:0002031,4.58e-17,120;CL:0000542,4.94e-15,53;CL:0000051,4.94e-15,53;CL:0000838,9.79e-15,52;CL:0000860,9.05e-14,42;CL:0002057,9.05e-14,42;CL:0000084,3.25e-11,25;CL:0000827,3.25e-11,25;CL:0000791,3.61e-11,18;CL:0000789,3.61e-11,18;CL:0002420,3.61e-11,18;CL:0002419,3.61e-11,18;CL:0000790,3.61e-11,18;CL:0000473,5.14e-11,48;CL:0000234,5.14e-11,48;CL:0000037,1.66e-09,168;CL:0000988,7.84e-09,177;CL:0002032,3.70e-08,161;CL:0000837,3.70e-08,161;CL:0000625,1.46e-07,11;CL:0002009,3.62e-07,61;CL:0002194,5.58e-07,59;CL:0000576,5.58e-07,59;CL:0000040,5.58e-07,59;CL:0000559,5.58e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000790;3.56e-11;18!CL:0002057;1.67e-10;42!CL:0000051;1.48e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.54e-15!94;UBERON:0001016!1.54e-15!94;UBERON:0001017!4.21e-14!82;UBERON:0001049!2.09e-13!57;UBERON:0005068!2.09e-13!57;UBERON:0006241!2.09e-13!57;UBERON:0007135!2.09e-13!57;UBERON:0005743!5.06e-13!86;UBERON:0000955!1.30e-12!69;UBERON:0006238!1.30e-12!69;UBERON:0007023!2.53e-11!115;UBERON:0002616!4.53e-11!59;UBERON:0002780!5.81e-11!41;UBERON:0001890!5.81e-11!41;UBERON:0006240!5.81e-11!41;UBERON:0003080!9.40e-11!42;UBERON:0002346!2.12e-10!90;UBERON:0003075!7.09e-10!86;UBERON:0007284!7.09e-10!86;UBERON:0002020!1.24e-08!34;UBERON:0003528!1.24e-08!34;UBERON:0001893!1.46e-08!34;UBERON:0002791!2.16e-08!33;UBERON:0000924!2.51e-08!173;UBERON:0006601!2.51e-08!173;UBERON:0000153!2.66e-08!129;UBERON:0007811!2.66e-08!129;UBERON:0004121!7.22e-08!169;UBERON:0001869!9.57e-08!32;UBERON:0000033!3.38e-07!123;UBERON:0003056!7.38e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.74e-08;41!UBERON:0001890;2.74e-08;41!UBERON:0000073;3.32e-08;53!UBERON:0002616;3.32e-08;53!UBERON:0001893;1.60e-07;34!UBERON:0003528;1.97e-07;34!UBERON:0002020;1.97e-07;34!UBERON:0002791;2.49e-07;32!UBERON:0001869;4.01e-07;32!UBERON:0001016;7.05e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.73e-17,89;UBERON:0001017,3.07e-14,81;UBERON:0001049,1.34e-13,56;UBERON:0005068,1.34e-13,56;UBERON:0006241,1.34e-13,56;UBERON:0007135,1.34e-13,56;UBERON:0000073,5.46e-13,53;UBERON:0002616,5.46e-13,53;UBERON:0000955,9.32e-13,68;UBERON:0006238,9.32e-13,68;UBERON:0007023,3.87e-11,114;UBERON:0002780,5.81e-11,41;UBERON:0001890,5.81e-11,41;UBERON:0003080,5.81e-11,41;UBERON:0006240,5.81e-11,41;UBERON:0002346,1.03e-09,86;UBERON:0003075,3.39e-09,82;UBERON:0007284,3.39e-09,82;UBERON:0003528,1.24e-08,34;UBERON:0002020,1.24e-08,34;UBERON:0001893,1.46e-08,34;UBERON:0002791,5.30e-08,32;UBERON:0001869,9.57e-08,32;UBERON:0004121,1.50e-07,171;UBERON:0000924,1.50e-07,171;UBERON:0006601,1.50e-07,171;UBERON:0003056,2.44e-07,61;UBERON:0002390,6.93e-07,98;UBERON:0003061,6.93e-07,98 | |||
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| ||
|short_description=p1@ZNF655 | |||
}} | }} |
Latest revision as of 16:08, 24 September 2015
Short description: | p1@ZNF655 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF655_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000423973, ENST00000449244, ENST00000486324, ENST00000493947_5end |
EntrezGene: | ZNF655 |
HGNC: | 30899 |
UniProt: | F8WDU5C9JNK1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 1.00e-21 | 115 |
leukocyte | 1.69e-19 | 136 |
hematopoietic lineage restricted progenitor cell | 4.58e-17 | 120 |
lymphocyte | 4.94e-15 | 53 |
common lymphoid progenitor | 4.94e-15 | 53 |
lymphoid lineage restricted progenitor cell | 9.79e-15 | 52 |
classical monocyte | 9.05e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.05e-14 | 42 |
T cell | 3.25e-11 | 25 |
pro-T cell | 3.25e-11 | 25 |
mature alpha-beta T cell | 3.61e-11 | 18 |
alpha-beta T cell | 3.61e-11 | 18 |
immature T cell | 3.61e-11 | 18 |
mature T cell | 3.61e-11 | 18 |
immature alpha-beta T cell | 3.61e-11 | 18 |
defensive cell | 5.14e-11 | 48 |
phagocyte | 5.14e-11 | 48 |
hematopoietic stem cell | 1.66e-09 | 168 |
hematopoietic cell | 7.84e-09 | 177 |
hematopoietic oligopotent progenitor cell | 3.70e-08 | 161 |
hematopoietic multipotent progenitor cell | 3.70e-08 | 161 |
CD8-positive, alpha-beta T cell | 1.46e-07 | 11 |
macrophage dendritic cell progenitor | 3.62e-07 | 61 |
monopoietic cell | 5.58e-07 | 59 |
monocyte | 5.58e-07 | 59 |
monoblast | 5.58e-07 | 59 |
promonocyte | 5.58e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
nervous system | 7.73e-17 | 89 |
central nervous system | 3.07e-14 | 81 |
neural tube | 1.34e-13 | 56 |
neural rod | 1.34e-13 | 56 |
future spinal cord | 1.34e-13 | 56 |
neural keel | 1.34e-13 | 56 |
regional part of nervous system | 5.46e-13 | 53 |
regional part of brain | 5.46e-13 | 53 |
brain | 9.32e-13 | 68 |
future brain | 9.32e-13 | 68 |
adult organism | 3.87e-11 | 114 |
regional part of forebrain | 5.81e-11 | 41 |
forebrain | 5.81e-11 | 41 |
anterior neural tube | 5.81e-11 | 41 |
future forebrain | 5.81e-11 | 41 |
neurectoderm | 1.03e-09 | 86 |
neural plate | 3.39e-09 | 82 |
presumptive neural plate | 3.39e-09 | 82 |
brain grey matter | 1.24e-08 | 34 |
gray matter | 1.24e-08 | 34 |
telencephalon | 1.46e-08 | 34 |
regional part of telencephalon | 5.30e-08 | 32 |
cerebral hemisphere | 9.57e-08 | 32 |
ectoderm-derived structure | 1.50e-07 | 171 |
ectoderm | 1.50e-07 | 171 |
presumptive ectoderm | 1.50e-07 | 171 |
pre-chordal neural plate | 2.44e-07 | 61 |
hematopoietic system | 6.93e-07 | 98 |
blood island | 6.93e-07 | 98 |