FFCP PHASE1:Hg19::chr11:788371..788384,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51286 | |EntrezGene=51286 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=24153 | |HGNC=24153 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N111 | |UniProt=Q8N111 | ||
|association_with_transcript=273bp_to_AF235030_5end | |association_with_transcript=273bp_to_AF235030_5end | ||
|cluster_id=chr11:788371..788384,- | |||
|coexpression_cluster_id=C149 | |||
|description=CAGE_peak_7_at_CEND1_5end | |description=CAGE_peak_7_at_CEND1_5end | ||
|id=chr11:788371..788384,- | |id=chr11:788371..788384,- | ||
|ontology_enrichment_celltype=CL:0002589!2.06e-09!2 | |ontology_enrichment_celltype=CL:0002589!2.06e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0002595;1.71e-14;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,1.83e-14,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.45e-45!57;UBERON:0005068!2.45e-45!57;UBERON:0006241!2.45e-45!57;UBERON:0007135!2.45e-45!57;UBERON:0002616!1.33e-43!59;UBERON:0001893!1.97e-42!34;UBERON:0001869!5.88e-41!32;UBERON:0002791!1.74e-39!33;UBERON:0000955!9.09e-39!69;UBERON:0006238!9.09e-39!69;UBERON:0002780!1.83e-38!41;UBERON:0001890!1.83e-38!41;UBERON:0006240!1.83e-38!41;UBERON:0003080!1.91e-37!42;UBERON:0001950!2.96e-36!20;UBERON:0003075!3.06e-35!86;UBERON:0007284!3.06e-35!86;UBERON:0005743!7.61e-35!86;UBERON:0002020!2.35e-34!34;UBERON:0003528!2.35e-34!34;UBERON:0001017!2.69e-34!82;UBERON:0002346!2.27e-33!90;UBERON:0000073!3.19e-33!94;UBERON:0001016!3.19e-33!94;UBERON:0000956!7.09e-33!25;UBERON:0000203!7.09e-33!25;UBERON:0002619!8.23e-33!22;UBERON:0003056!7.99e-27!61;UBERON:0000033!3.64e-24!123;UBERON:0000153!1.02e-22!129;UBERON:0007811!1.02e-22!129;UBERON:0007023!4.36e-21!115;UBERON:0000200!2.55e-17!6;UBERON:0004121!9.07e-17!169;UBERON:0000025!1.50e-16!194;UBERON:0000924!3.23e-16!173;UBERON:0006601!3.23e-16!173;UBERON:0001872!1.20e-13!5;UBERON:0001896!2.76e-13!3;UBERON:0002771!2.76e-13!3;UBERON:0005290!2.76e-13!3;UBERON:0010096!2.76e-13!3;UBERON:0001871!3.97e-13!7;UBERON:0004111!8.70e-13!241;UBERON:0004733!1.26e-11!12;UBERON:0002028!1.26e-11!12;UBERON:0007277!1.26e-11!12;UBERON:0004732!1.11e-10!13;UBERON:0000475!1.21e-10!365;UBERON:0000483!1.41e-10!309;UBERON:0000477!2.08e-10!286;UBERON:0000119!2.15e-10!312;UBERON:0000369!7.75e-10!4;UBERON:0002435!7.75e-10!4;UBERON:0000204!7.75e-10!4;UBERON:0010082!7.75e-10!4;UBERON:0001529!2.06e-09!2;UBERON:0007204!2.06e-09!2;UBERON:0003076!3.58e-09!15;UBERON:0003057!3.58e-09!15;UBERON:0000481!1.56e-08!347;UBERON:0002021!1.75e-08!5;UBERON:0002298!2.46e-08!8;UBERON:0000064!6.06e-08!219 | |ontology_enrichment_uberon=UBERON:0001049!2.45e-45!57;UBERON:0005068!2.45e-45!57;UBERON:0006241!2.45e-45!57;UBERON:0007135!2.45e-45!57;UBERON:0002616!1.33e-43!59;UBERON:0001893!1.97e-42!34;UBERON:0001869!5.88e-41!32;UBERON:0002791!1.74e-39!33;UBERON:0000955!9.09e-39!69;UBERON:0006238!9.09e-39!69;UBERON:0002780!1.83e-38!41;UBERON:0001890!1.83e-38!41;UBERON:0006240!1.83e-38!41;UBERON:0003080!1.91e-37!42;UBERON:0001950!2.96e-36!20;UBERON:0003075!3.06e-35!86;UBERON:0007284!3.06e-35!86;UBERON:0005743!7.61e-35!86;UBERON:0002020!2.35e-34!34;UBERON:0003528!2.35e-34!34;UBERON:0001017!2.69e-34!82;UBERON:0002346!2.27e-33!90;UBERON:0000073!3.19e-33!94;UBERON:0001016!3.19e-33!94;UBERON:0000956!7.09e-33!25;UBERON:0000203!7.09e-33!25;UBERON:0002619!8.23e-33!22;UBERON:0003056!7.99e-27!61;UBERON:0000033!3.64e-24!123;UBERON:0000153!1.02e-22!129;UBERON:0007811!1.02e-22!129;UBERON:0007023!4.36e-21!115;UBERON:0000200!2.55e-17!6;UBERON:0004121!9.07e-17!169;UBERON:0000025!1.50e-16!194;UBERON:0000924!3.23e-16!173;UBERON:0006601!3.23e-16!173;UBERON:0001872!1.20e-13!5;UBERON:0001896!2.76e-13!3;UBERON:0002771!2.76e-13!3;UBERON:0005290!2.76e-13!3;UBERON:0010096!2.76e-13!3;UBERON:0001871!3.97e-13!7;UBERON:0004111!8.70e-13!241;UBERON:0004733!1.26e-11!12;UBERON:0002028!1.26e-11!12;UBERON:0007277!1.26e-11!12;UBERON:0004732!1.11e-10!13;UBERON:0000475!1.21e-10!365;UBERON:0000483!1.41e-10!309;UBERON:0000477!2.08e-10!286;UBERON:0000119!2.15e-10!312;UBERON:0000369!7.75e-10!4;UBERON:0002435!7.75e-10!4;UBERON:0000204!7.75e-10!4;UBERON:0010082!7.75e-10!4;UBERON:0001529!2.06e-09!2;UBERON:0007204!2.06e-09!2;UBERON:0003076!3.58e-09!15;UBERON:0003057!3.58e-09!15;UBERON:0000481!1.56e-08!347;UBERON:0002021!1.75e-08!5;UBERON:0002298!2.46e-08!8;UBERON:0000064!6.06e-08!219 | ||
|ontology_enrichment_uberon_v019=UBERON:0002771;5.96e-34;2!UBERON:0002021;1.40e-14;5!UBERON:0003834;1.71e-14;5!UBERON:0001533;1.71e-14;5!UBERON:0001950;1.05e-13;20!UBERON:0002619;1.29e-12;22!UBERON:0000200;2.59e-12;6!UBERON:0000956;2.70e-11;25!UBERON:0000203;2.70e-11;25!UBERON:0001871;9.43e-11;6!UBERON:0003513;9.43e-11;7!UBERON:0002791;2.73e-09;32!UBERON:0001869;2.73e-09;32!UBERON:0001893;1.23e-08;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002771,5.04e-34,2;UBERON:0002021,1.40e-14,5;UBERON:0003834,1.83e-14,5;UBERON:0001533,1.83e-14,5;UBERON:0001950,1.02e-13,20;UBERON:0002619,1.25e-12,22;UBERON:0000200,2.45e-12,6;UBERON:0000956,2.63e-11,25;UBERON:0000203,2.63e-11,25;UBERON:0001871,8.99e-11,6;UBERON:0003513,9.89e-11,7;UBERON:0002791,3.79e-09,32;UBERON:0001869,3.79e-09,32;UBERON:0003528,1.09e-08,34;UBERON:0002020,1.09e-08,34;UBERON:0001893,1.09e-08,34;UBERON:0002780,2.04e-07,41;UBERON:0001890,2.04e-07,41;UBERON:0003080,2.04e-07,41;UBERON:0006240,2.04e-07,41 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0.429374660225974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,1.10273068709225,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0.067401132980677,0,0.937057782901357,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303747783290123,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34228891392159,0.250381861413,0.573409195690071,0.221858103073705,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,6.76884001994492,0.756215088665154,0.276629009856872,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.126831620387814,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.526182188502793,0,0,0,0.314231179832004,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339957450954573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0.429374660225974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,1.10273068709225,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0.067401132980677,0,0.937057782901357,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303747783290123,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34228891392159,0.250381861413,0.573409195690071,0.221858103073705,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,6.76884001994492,0.756215088665154,0.276629009856872,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.126831620387814,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.526182188502793,0,0,0,0.314231179832004,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339957450954573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@CEND1 | |short_description=p7@CEND1 | ||
}} | }} |
Latest revision as of 16:07, 24 September 2015
Short description: | p7@CEND1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CEND1_5end |
Coexpression cluster: | C149_occipital_medial_brain_amygdala_parietal_cerebral_cerebellum |
Association with transcript: | 273bp_to_AF235030_5end |
EntrezGene: | CEND1 |
HGNC: | 24153 |
UniProt: | Q8N111 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 1.83e-14 | 5 |
Ontology term | p-value | n |
---|---|---|
middle temporal gyrus | 5.04e-34 | 2 |
occipital lobe | 1.40e-14 | 5 |
thoracic segment blood vessel | 1.83e-14 | 5 |
subclavian artery | 1.83e-14 | 5 |
neocortex | 1.02e-13 | 20 |
regional part of cerebral cortex | 1.25e-12 | 22 |
gyrus | 2.45e-12 | 6 |
cerebral cortex | 2.63e-11 | 25 |
pallium | 2.63e-11 | 25 |
temporal lobe | 8.99e-11 | 6 |
trunk blood vessel | 9.89e-11 | 7 |
regional part of telencephalon | 3.79e-09 | 32 |
cerebral hemisphere | 3.79e-09 | 32 |
brain grey matter | 1.09e-08 | 34 |
gray matter | 1.09e-08 | 34 |
telencephalon | 1.09e-08 | 34 |
regional part of forebrain | 2.04e-07 | 41 |
forebrain | 2.04e-07 | 41 |
anterior neural tube | 2.04e-07 | 41 |
future forebrain | 2.04e-07 | 41 |