FFCP PHASE1:Hg19::chr2:219081854..219081931,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10109 | |EntrezGene=10109 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=705 | |HGNC=705 | ||
|TSSclassifier=strong | |||
|UniProt=G5E9S7,C9JTV5,G5E9J0,O15144,Q53R19 | |UniProt=G5E9S7,C9JTV5,G5E9J0,O15144,Q53R19 | ||
|association_with_transcript=0bp_to_ENST00000414983,ENST00000420104,ENST00000420201,ENST00000478612,ENST00000480062,ENST00000489598,ENST00000491780,NM_152862,uc002vhd.2_5end | |association_with_transcript=0bp_to_ENST00000414983,ENST00000420104,ENST00000420201,ENST00000478612,ENST00000480062,ENST00000489598,ENST00000491780,NM_152862,uc002vhd.2_5end | ||
|cluster_id=chr2:219081854..219081931,+ | |||
|description=CAGE_peak_1_at_ARPC2_5end | |description=CAGE_peak_1_at_ARPC2_5end | ||
|id=chr2:219081854..219081931,+ | |id=chr2:219081854..219081931,+ | ||
|ontology_enrichment_celltype=CL:0002371!1.79e-36!591;CL:0000144!5.88e-33!625;CL:0000723!8.51e-29!436;CL:0000048!1.99e-28!430;CL:0000034!8.41e-27!444;CL:0000738!4.11e-26!140;CL:0000766!2.17e-24!76;CL:0002009!2.63e-24!65;CL:0002194!2.94e-24!63;CL:0000576!2.94e-24!63;CL:0000040!2.94e-24!63;CL:0000559!2.94e-24!63;CL:0002057!5.50e-24!42;CL:0002087!1.27e-23!119;CL:0000003!1.35e-23!722;CL:0000548!3.76e-22!679;CL:0000004!3.76e-22!679;CL:0000255!3.76e-22!679;CL:0000012!4.42e-22!682;CL:0000134!7.27e-22!358;CL:0002320!2.41e-20!365;CL:0000037!2.94e-20!172;CL:0000566!2.94e-20!172;CL:0002032!4.65e-20!165;CL:0000837!4.65e-20!165;CL:0000557!1.01e-19!71;CL:0000860!1.03e-19!45;CL:0000988!1.65e-19!182;CL:0000063!2.25e-19!578;CL:0002031!6.30e-19!124;CL:0000839!3.30e-18!70;CL:0000763!1.30e-17!112;CL:0000049!1.30e-17!112;CL:0000219!2.29e-14!390;CL:0000359!4.09e-08!32 | |ontology_enrichment_celltype=CL:0002371!1.79e-36!591;CL:0000144!5.88e-33!625;CL:0000723!8.51e-29!436;CL:0000048!1.99e-28!430;CL:0000034!8.41e-27!444;CL:0000738!4.11e-26!140;CL:0000766!2.17e-24!76;CL:0002009!2.63e-24!65;CL:0002194!2.94e-24!63;CL:0000576!2.94e-24!63;CL:0000040!2.94e-24!63;CL:0000559!2.94e-24!63;CL:0002057!5.50e-24!42;CL:0002087!1.27e-23!119;CL:0000003!1.35e-23!722;CL:0000548!3.76e-22!679;CL:0000004!3.76e-22!679;CL:0000255!3.76e-22!679;CL:0000012!4.42e-22!682;CL:0000134!7.27e-22!358;CL:0002320!2.41e-20!365;CL:0000037!2.94e-20!172;CL:0000566!2.94e-20!172;CL:0002032!4.65e-20!165;CL:0000837!4.65e-20!165;CL:0000557!1.01e-19!71;CL:0000860!1.03e-19!45;CL:0000988!1.65e-19!182;CL:0000063!2.25e-19!578;CL:0002031!6.30e-19!124;CL:0000839!3.30e-18!70;CL:0000763!1.30e-17!112;CL:0000049!1.30e-17!112;CL:0000219!2.29e-14!390;CL:0000359!4.09e-08!32 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.46e-18;33!CL:0002057;8.46e-18;33!CL:0000473;1.07e-17;39!CL:0000234;1.07e-17;39!CL:0000576;1.57e-14;48!CL:0000766;6.54e-12;69!CL:0000359;1.22e-07;32!CL:0002087;3.25e-07;104!CL:0000738;3.60e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,1.67e-29,433;CL:0000048,3.90e-29,427;CL:0000738,5.09e-28,136;CL:0002194,1.60e-27,59;CL:0000576,1.60e-27,59;CL:0000040,1.60e-27,59;CL:0000559,1.60e-27,59;CL:0002009,1.70e-27,61;CL:0000034,1.78e-27,441;CL:0000473,2.43e-27,48;CL:0000234,2.43e-27,48;CL:0000766,3.17e-27,72;CL:0002087,1.29e-25,115;CL:0000860,5.50e-24,42;CL:0002057,5.50e-24,42;CL:0000134,5.96e-23,354;CL:0000557,2.83e-22,67;CL:0000037,1.17e-21,168;CL:0002032,1.73e-21,161;CL:0000837,1.73e-21,161;CL:0002320,2.23e-21,361;CL:0000839,1.23e-20,66;CL:0002031,1.38e-20,120;CL:0000988,1.55e-20,177;CL:0000763,2.63e-19,108;CL:0000049,2.63e-19,108;CL:0000219,3.42e-15,386;CL:0000359,4.09e-08,32 | |||
|ontology_enrichment_development_v019=CL:0002057;1.73e-17;42!CL:0000049;9.87e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.26e-24!216;UBERON:0002390!1.53e-20!102;UBERON:0003061!1.53e-20!102;UBERON:0002193!4.84e-20!112;UBERON:0002384!4.09e-19!375;UBERON:0002371!1.23e-18!80;UBERON:0002204!1.34e-18!167;UBERON:0001474!9.78e-16!86;UBERON:0004765!7.13e-15!101;UBERON:0001434!7.13e-15!101;UBERON:0002405!3.36e-11!115;UBERON:0004535!1.56e-09!110;UBERON:0001009!1.57e-08!113;UBERON:0001637!4.56e-08!42;UBERON:0003509!4.56e-08!42;UBERON:0004572!4.56e-08!42;UBERON:0004872!5.24e-08!84;UBERON:0001981!5.83e-08!60;UBERON:0007500!5.83e-08!60;UBERON:0004537!5.83e-08!60;UBERON:0006965!5.83e-08!60;UBERON:0000055!7.63e-08!69;UBERON:0000926!3.44e-07!448;UBERON:0004120!3.44e-07!448;UBERON:0006603!3.44e-07!448 | |ontology_enrichment_uberon=UBERON:0003081!1.26e-24!216;UBERON:0002390!1.53e-20!102;UBERON:0003061!1.53e-20!102;UBERON:0002193!4.84e-20!112;UBERON:0002384!4.09e-19!375;UBERON:0002371!1.23e-18!80;UBERON:0002204!1.34e-18!167;UBERON:0001474!9.78e-16!86;UBERON:0004765!7.13e-15!101;UBERON:0001434!7.13e-15!101;UBERON:0002405!3.36e-11!115;UBERON:0004535!1.56e-09!110;UBERON:0001009!1.57e-08!113;UBERON:0001637!4.56e-08!42;UBERON:0003509!4.56e-08!42;UBERON:0004572!4.56e-08!42;UBERON:0004872!5.24e-08!84;UBERON:0001981!5.83e-08!60;UBERON:0007500!5.83e-08!60;UBERON:0004537!5.83e-08!60;UBERON:0006965!5.83e-08!60;UBERON:0000055!7.63e-08!69;UBERON:0000926!3.44e-07!448;UBERON:0004120!3.44e-07!448;UBERON:0006603!3.44e-07!448 | ||
|ontology_enrichment_uberon_v019= | |||
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53,475.082505593391 | ||
|short_description=p1@ARPC2 | |short_description=p1@ARPC2 | ||
}} | }} |
Latest revision as of 16:02, 24 September 2015
Short description: | p1@ARPC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ARPC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000414983, ENST00000420104, ENST00000420201, ENST00000478612, ENST00000480062, ENST00000489598, ENST00000491780, NM_152862, uc002vhd.2_5end |
EntrezGene: | ARPC2 |
HGNC: | 705 |
UniProt: | G5E9S7C9JTV5G5E9J0O15144Q53R19 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 1.67e-29 | 433 |
multi fate stem cell | 3.90e-29 | 427 |
leukocyte | 5.09e-28 | 136 |
monopoietic cell | 1.60e-27 | 59 |
monocyte | 1.60e-27 | 59 |
monoblast | 1.60e-27 | 59 |
promonocyte | 1.60e-27 | 59 |
macrophage dendritic cell progenitor | 1.70e-27 | 61 |
stem cell | 1.78e-27 | 441 |
defensive cell | 2.43e-27 | 48 |
phagocyte | 2.43e-27 | 48 |
myeloid leukocyte | 3.17e-27 | 72 |
nongranular leukocyte | 1.29e-25 | 115 |
classical monocyte | 5.50e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.50e-24 | 42 |
mesenchymal cell | 5.96e-23 | 354 |
granulocyte monocyte progenitor cell | 2.83e-22 | 67 |
hematopoietic stem cell | 1.17e-21 | 168 |
hematopoietic oligopotent progenitor cell | 1.73e-21 | 161 |
hematopoietic multipotent progenitor cell | 1.73e-21 | 161 |
connective tissue cell | 2.23e-21 | 361 |
myeloid lineage restricted progenitor cell | 1.23e-20 | 66 |
hematopoietic lineage restricted progenitor cell | 1.38e-20 | 120 |
hematopoietic cell | 1.55e-20 | 177 |
myeloid cell | 2.63e-19 | 108 |
common myeloid progenitor | 2.63e-19 | 108 |
motile cell | 3.42e-15 | 386 |
vascular associated smooth muscle cell | 4.09e-08 | 32 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 2.20e-27 | 203 |
hematopoietic system | 1.47e-22 | 98 |
blood island | 1.47e-22 | 98 |
hemolymphoid system | 6.78e-22 | 108 |
bone marrow | 7.09e-21 | 76 |
mesoderm | 1.46e-20 | 315 |
mesoderm-derived structure | 1.46e-20 | 315 |
presumptive mesoderm | 1.46e-20 | 315 |
connective tissue | 4.23e-20 | 371 |
immune system | 1.06e-18 | 93 |
musculoskeletal system | 1.35e-18 | 167 |
bone element | 1.29e-17 | 82 |
skeletal element | 4.66e-17 | 90 |
skeletal system | 1.79e-15 | 100 |
cardiovascular system | 3.48e-09 | 109 |
circulatory system | 3.32e-08 | 112 |
artery | 4.56e-08 | 42 |
arterial blood vessel | 4.56e-08 | 42 |
arterial system | 4.56e-08 | 42 |
splanchnic layer of lateral plate mesoderm | 1.17e-07 | 83 |
epithelial tube open at both ends | 1.41e-07 | 59 |
blood vessel | 1.41e-07 | 59 |
blood vasculature | 1.41e-07 | 59 |
vascular cord | 1.41e-07 | 59 |
vessel | 1.77e-07 | 68 |