FFCP PHASE1:Hg19::chr19:6393189..6393210,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2962 | |EntrezGene=2962 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4652 | |HGNC=4652 | ||
|TSSclassifier=strong | |||
|UniProt=F5H761 | |UniProt=F5H761 | ||
|association_with_transcript=5bp_to_ENST00000542045_5end | |association_with_transcript=5bp_to_ENST00000542045_5end | ||
|cluster_id=chr19:6393189..6393210,- | |||
|description=CAGE_peak_2_at_GTF2F1_5end | |description=CAGE_peak_2_at_GTF2F1_5end | ||
|id=chr19:6393189..6393210,- | |id=chr19:6393189..6393210,- | ||
|ontology_enrichment_celltype=CL:0000077!2.21e-09!19 | |ontology_enrichment_celltype=CL:0000077!2.21e-09!19 | ||
|ontology_enrichment_celltype_v019=CL:0000077;1.78e-09;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,2.21e-09,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.69e-08!365;UBERON:0001049!3.37e-07!57;UBERON:0005068!3.37e-07!57;UBERON:0006241!3.37e-07!57;UBERON:0007135!3.37e-07!57;UBERON:0003075!5.41e-07!86;UBERON:0007284!5.41e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,1.16e-08,104;UBERON:0000073,9.67e-08,53;UBERON:0002616,9.67e-08,53;UBERON:0001049,1.28e-07,56;UBERON:0005068,1.28e-07,56;UBERON:0006241,1.28e-07,56;UBERON:0007135,1.28e-07,56 | |||
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9164 | ||
|short_description=p2@GTF2F1 | |short_description=p2@GTF2F1 | ||
}} | }} |
Latest revision as of 15:43, 24 September 2015
Short description: | p2@GTF2F1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GTF2F1_5end |
Coexpression cluster: | NA |
Association with transcript: | 5bp_to_ENST00000542045_5end |
EntrezGene: | GTF2F1 |
HGNC: | 4652 |
UniProt: | F5H761 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 2.21e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 1.16e-08 | 104 |
regional part of nervous system | 9.67e-08 | 53 |
regional part of brain | 9.67e-08 | 53 |
neural tube | 1.28e-07 | 56 |
neural rod | 1.28e-07 | 56 |
future spinal cord | 1.28e-07 | 56 |
neural keel | 1.28e-07 | 56 |