FFCP PHASE1:Hg19::chr22:38883973..38884130,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10521 | |EntrezGene=10521 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2740 | |HGNC=2740 | ||
|TSSclassifier=strong | |||
|UniProt=G5E9L5 | |UniProt=G5E9L5 | ||
|association_with_transcript=404bp_to_ENST00000444597,uc003avw.3_5end | |association_with_transcript=404bp_to_ENST00000444597,uc003avw.3_5end | ||
|cluster_id=chr22:38883973..38884130,- | |||
|description=CAGE_peak_7_at_DDX17_5end | |description=CAGE_peak_7_at_DDX17_5end | ||
|id=chr22:38883973..38884130,- | |id=chr22:38883973..38884130,- | ||
|ontology_enrichment_celltype=CL:0002057!5.22e-11!42;CL:0000839!3.83e-10!70;CL:0000557!1.28e-09!71;CL:0000860!2.07e-09!45;CL:0000766!2.88e-09!76;CL:0002194!3.01e-09!63;CL:0000576!3.01e-09!63;CL:0000040!3.01e-09!63;CL:0000559!3.01e-09!63;CL:0002009!7.02e-09!65;CL:0000763!1.24e-08!112;CL:0000049!1.24e-08!112;CL:0000738!4.42e-08!140;CL:0002032!7.72e-08!165;CL:0000837!7.72e-08!165;CL:0002031!1.08e-07!124;CL:0000037!1.28e-07!172;CL:0000566!1.28e-07!172;CL:0002087!1.42e-07!119;CL:0000988!5.82e-07!182 | |ontology_enrichment_celltype=CL:0002057!5.22e-11!42;CL:0000839!3.83e-10!70;CL:0000557!1.28e-09!71;CL:0000860!2.07e-09!45;CL:0000766!2.88e-09!76;CL:0002194!3.01e-09!63;CL:0000576!3.01e-09!63;CL:0000040!3.01e-09!63;CL:0000559!3.01e-09!63;CL:0002009!7.02e-09!65;CL:0000763!1.24e-08!112;CL:0000049!1.24e-08!112;CL:0000738!4.42e-08!140;CL:0002032!7.72e-08!165;CL:0000837!7.72e-08!165;CL:0002031!1.08e-07!124;CL:0000037!1.28e-07!172;CL:0000566!1.28e-07!172;CL:0002087!1.42e-07!119;CL:0000988!5.82e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.41e-16;33!CL:0002057;1.41e-16;33!CL:0000473;1.17e-11;39!CL:0000234;1.17e-11;39!CL:0000576;4.76e-09;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,3.92e-12,66;CL:0000557,1.49e-11,67;CL:0002194,3.02e-11,59;CL:0000576,3.02e-11,59;CL:0000040,3.02e-11,59;CL:0000559,3.02e-11,59;CL:0000860,3.95e-11,42;CL:0002057,3.95e-11,42;CL:0000766,4.16e-11,72;CL:0002009,9.66e-11,61;CL:0000763,6.09e-10,108;CL:0000049,6.09e-10,108;CL:0000473,7.63e-10,48;CL:0000234,7.63e-10,48;CL:0000738,3.45e-09,136;CL:0002032,9.51e-09,161;CL:0000837,9.51e-09,161;CL:0002031,9.89e-09,120;CL:0002087,1.18e-08,115;CL:0000037,1.53e-08,168;CL:0000988,7.11e-08,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.88e-08;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.79e-08!102;UBERON:0003061!2.79e-08!102;UBERON:0002371!8.08e-08!80;UBERON:0001474!1.63e-07!86;UBERON:0002193!2.34e-07!112 | |ontology_enrichment_uberon=UBERON:0002390!2.79e-08!102;UBERON:0003061!2.79e-08!102;UBERON:0002371!8.08e-08!80;UBERON:0001474!1.63e-07!86;UBERON:0002193!2.34e-07!112 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.73e-10,98;UBERON:0003061,8.73e-10,98;UBERON:0002371,1.98e-09,76;UBERON:0001474,5.68e-09,82;UBERON:0002193,1.01e-08,108;UBERON:0004765,1.80e-07,90;UBERON:0002405,3.14e-07,93;UBERON:0001434,7.33e-07,100 | |||
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| ||
|short_description=p7@DDX17 | |short_description=p7@DDX17 | ||
}} | }} |
Latest revision as of 15:32, 24 September 2015
Short description: | p7@DDX17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_DDX17_5end |
Coexpression cluster: | NA |
Association with transcript: | 404bp_to_ENST00000444597, uc003avw.3_5end |
EntrezGene: | DDX17 |
HGNC: | 2740 |
UniProt: | G5E9L5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 3.92e-12 | 66 |
granulocyte monocyte progenitor cell | 1.49e-11 | 67 |
monopoietic cell | 3.02e-11 | 59 |
monocyte | 3.02e-11 | 59 |
monoblast | 3.02e-11 | 59 |
promonocyte | 3.02e-11 | 59 |
classical monocyte | 3.95e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.95e-11 | 42 |
myeloid leukocyte | 4.16e-11 | 72 |
macrophage dendritic cell progenitor | 9.66e-11 | 61 |
myeloid cell | 6.09e-10 | 108 |
common myeloid progenitor | 6.09e-10 | 108 |
defensive cell | 7.63e-10 | 48 |
phagocyte | 7.63e-10 | 48 |
leukocyte | 3.45e-09 | 136 |
hematopoietic oligopotent progenitor cell | 9.51e-09 | 161 |
hematopoietic multipotent progenitor cell | 9.51e-09 | 161 |
hematopoietic lineage restricted progenitor cell | 9.89e-09 | 120 |
nongranular leukocyte | 1.18e-08 | 115 |
hematopoietic stem cell | 1.53e-08 | 168 |
hematopoietic cell | 7.11e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.73e-10 | 98 |
blood island | 8.73e-10 | 98 |
bone marrow | 1.98e-09 | 76 |
bone element | 5.68e-09 | 82 |
hemolymphoid system | 1.01e-08 | 108 |
skeletal element | 1.80e-07 | 90 |
immune system | 3.14e-07 | 93 |
skeletal system | 7.33e-07 | 100 |