FFCP PHASE1:Hg19::chr4:109541723..109541738,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6164 | |EntrezGene=6164 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10340 | |HGNC=10340 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000502534_5end | |association_with_transcript=0bp_to_ENST00000502534_5end | ||
|cluster_id=chr4:109541723..109541738,+ | |||
|coexpression_cluster_id=C2568 | |||
|description=CAGE_peak_1_at_RPL34_5end | |description=CAGE_peak_1_at_RPL34_5end | ||
|id=chr4:109541723..109541738,+ | |id=chr4:109541723..109541738,+ | ||
|ontology_enrichment_celltype=CL:0000988!5.20e-27!182;CL:0000037!9.44e-27!172;CL:0000566!9.44e-27!172;CL:0002032!1.44e-25!165;CL:0000837!1.44e-25!165;CL:0002031!5.26e-23!124;CL:0000738!3.30e-22!140;CL:0002087!1.54e-21!119;CL:0002320!2.03e-20!365;CL:0000034!2.43e-19!444;CL:0000134!3.68e-19!358;CL:0002057!6.46e-19!42;CL:0000048!7.18e-19!430;CL:0000723!1.42e-17!436;CL:0000219!5.34e-16!390;CL:0000860!7.70e-16!45;CL:0000144!9.82e-16!625;CL:0000003!3.68e-15!722;CL:0002371!6.90e-15!591;CL:0000838!8.45e-15!52;CL:0000542!2.32e-14!53;CL:0000051!2.32e-14!53;CL:0000763!5.63e-12!112;CL:0000049!5.63e-12!112;CL:0000012!2.61e-11!682;CL:0000548!4.09e-10!679;CL:0000004!4.09e-10!679;CL:0000255!4.09e-10!679;CL:0000791!2.73e-09!18;CL:0000789!2.73e-09!18;CL:0002420!2.73e-09!18;CL:0002419!2.73e-09!18;CL:0000790!2.73e-09!18;CL:0000063!9.04e-09!578;CL:0002009!9.32e-09!65;CL:0000084!1.06e-08!25;CL:0000827!1.06e-08!25;CL:0000839!1.16e-08!70;CL:0000557!1.82e-08!71;CL:0002194!4.66e-08!63;CL:0000576!4.66e-08!63;CL:0000040!4.66e-08!63;CL:0000559!4.66e-08!63;CL:0000766!5.93e-08!76;CL:0000236!1.01e-07!14 | |ontology_enrichment_celltype=CL:0000988!5.20e-27!182;CL:0000037!9.44e-27!172;CL:0000566!9.44e-27!172;CL:0002032!1.44e-25!165;CL:0000837!1.44e-25!165;CL:0002031!5.26e-23!124;CL:0000738!3.30e-22!140;CL:0002087!1.54e-21!119;CL:0002320!2.03e-20!365;CL:0000034!2.43e-19!444;CL:0000134!3.68e-19!358;CL:0002057!6.46e-19!42;CL:0000048!7.18e-19!430;CL:0000723!1.42e-17!436;CL:0000219!5.34e-16!390;CL:0000860!7.70e-16!45;CL:0000144!9.82e-16!625;CL:0000003!3.68e-15!722;CL:0002371!6.90e-15!591;CL:0000838!8.45e-15!52;CL:0000542!2.32e-14!53;CL:0000051!2.32e-14!53;CL:0000763!5.63e-12!112;CL:0000049!5.63e-12!112;CL:0000012!2.61e-11!682;CL:0000548!4.09e-10!679;CL:0000004!4.09e-10!679;CL:0000255!4.09e-10!679;CL:0000791!2.73e-09!18;CL:0000789!2.73e-09!18;CL:0002420!2.73e-09!18;CL:0002419!2.73e-09!18;CL:0000790!2.73e-09!18;CL:0000063!9.04e-09!578;CL:0002009!9.32e-09!65;CL:0000084!1.06e-08!25;CL:0000827!1.06e-08!25;CL:0000839!1.16e-08!70;CL:0000557!1.82e-08!71;CL:0002194!4.66e-08!63;CL:0000576!4.66e-08!63;CL:0000040!4.66e-08!63;CL:0000559!4.66e-08!63;CL:0000766!5.93e-08!76;CL:0000236!1.01e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.30e-14;33!CL:0002057;1.30e-14;33!CL:0000473;1.23e-09;39!CL:0000234;1.23e-09;39!CL:0000791;2.84e-09;18!CL:0000789;2.84e-09;18!CL:0002419;2.84e-09;18!CL:0000542;3.76e-09;53!CL:0000576;3.99e-09;48!CL:0000084;1.02e-08;25!CL:0002087;1.02e-08;104!CL:0000236;9.01e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.36e-28,177;CL:0000037,1.59e-28,168;CL:0002032,2.45e-27,161;CL:0000837,2.45e-27,161;CL:0002031,5.31e-25,120;CL:0000738,5.30e-24,136;CL:0002087,1.68e-23,115;CL:0002320,2.60e-21,361;CL:0000034,3.34e-20,441;CL:0000134,4.97e-20,354;CL:0000048,9.95e-20,427;CL:0000860,6.46e-19,42;CL:0002057,6.46e-19,42;CL:0000723,2.14e-18,433;CL:0000219,9.46e-17,386;CL:0000473,8.75e-16,48;CL:0000234,8.75e-16,48;CL:0000838,8.45e-15,52;CL:0000542,2.32e-14,53;CL:0000051,2.32e-14,53;CL:0000763,2.44e-13,108;CL:0000049,2.44e-13,108;CL:0002009,2.52e-10,61;CL:0000839,3.87e-10,66;CL:0000557,6.59e-10,67;CL:0002194,1.45e-09,59;CL:0000576,1.45e-09,59;CL:0000040,1.45e-09,59;CL:0000559,1.45e-09,59;CL:0000791,2.73e-09,18;CL:0000789,2.73e-09,18;CL:0002420,2.73e-09,18;CL:0002419,2.73e-09,18;CL:0000790,2.73e-09,18;CL:0000766,2.88e-09,72;CL:0000084,1.06e-08,25;CL:0000827,1.06e-08,25;CL:0000236,1.01e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;9.86e-14;42!CL:0000790;2.84e-09;18!CL:0000051;3.76e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!5.07e-20!375;UBERON:0002371!9.56e-10!80;UBERON:0002390!9.08e-09!102;UBERON:0003061!9.08e-09!102;UBERON:0002193!1.15e-08!112;UBERON:0001474!1.44e-08!86;UBERON:0004765!3.34e-07!101;UBERON:0001434!3.34e-07!101 | |ontology_enrichment_uberon=UBERON:0002384!5.07e-20!375;UBERON:0002371!9.56e-10!80;UBERON:0002390!9.08e-09!102;UBERON:0003061!9.08e-09!102;UBERON:0002193!1.15e-08!112;UBERON:0001474!1.44e-08!86;UBERON:0004765!3.34e-07!101;UBERON:0001434!3.34e-07!101 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.82e-21,371;UBERON:0002371,3.23e-11,76;UBERON:0004765,1.07e-10,90;UBERON:0002390,6.23e-10,98;UBERON:0003061,6.23e-10,98;UBERON:0001474,7.59e-10,82;UBERON:0002193,9.40e-10,108;UBERON:0002405,4.42e-09,93;UBERON:0001434,1.46e-08,100 | |||
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| ||
|short_description=p1@RPL34 | |short_description=p1@RPL34 | ||
}} | }} |
Latest revision as of 15:31, 24 September 2015
Short description: | p1@RPL34 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RPL34_5end |
Coexpression cluster: | C2568_CD4_Smooth_Aortic_acute_CD34_Fibroblast_CD8 |
Association with transcript: | 0bp_to_ENST00000502534_5end |
EntrezGene: | RPL34 |
HGNC: | 10340 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 6.82e-21 | 371 |
bone marrow | 3.23e-11 | 76 |
skeletal element | 1.07e-10 | 90 |
hematopoietic system | 6.23e-10 | 98 |
blood island | 6.23e-10 | 98 |
bone element | 7.59e-10 | 82 |
hemolymphoid system | 9.40e-10 | 108 |
immune system | 4.42e-09 | 93 |
skeletal system | 1.46e-08 | 100 |