FFCP PHASE1:Hg19::chr2:218802260..218802273,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7145 | |EntrezGene=7145 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11973 | |HGNC=11973 | ||
|TSSclassifier=strong | |||
|UniProt=C9J8K5 | |UniProt=C9J8K5 | ||
|association_with_transcript=-375bp_to_ENST00000423413_5end | |association_with_transcript=-375bp_to_ENST00000423413_5end | ||
|cluster_id=chr2:218802260..218802273,- | |||
|description=CAGE_peak_30_at_TNS1_5end | |description=CAGE_peak_30_at_TNS1_5end | ||
|id=chr2:218802260..218802273,- | |id=chr2:218802260..218802273,- | ||
|ontology_enrichment_celltype=CL:0000071!6.09e-09!18;CL:0002546!6.09e-09!18;CL:0002594!3.02e-07!4 | |ontology_enrichment_celltype=CL:0000071!6.09e-09!18;CL:0002546!6.09e-09!18;CL:0002594!3.02e-07!4 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;7.61e-22;4!UBERON:0007284;7.61e-22;4!UBERON:0004872;6.20e-13;7!UBERON:0000358;2.93e-11;1!UBERON:0004140;8.20e-11;1!UBERON:0006603;6.28e-07;65 | |ontology_enrichment_development_v019=UBERON:0005062;7.61e-22;4!UBERON:0007284;7.61e-22;4!UBERON:0004872;6.20e-13;7!UBERON:0000358;2.93e-11;1!UBERON:0004140;8.20e-11;1!UBERON:0006603;6.28e-07;65 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:8552;2.93e-11;1 | |ontology_enrichment_disease_v019=DOID:8552;2.93e-11;1 | ||
|ontology_enrichment_disease_v019_2=DOID:8552,3.08e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0004872!6.94e-18!84;UBERON:0001981!9.28e-17!60;UBERON:0007500!9.28e-17!60;UBERON:0004537!9.28e-17!60;UBERON:0006965!9.28e-17!60;UBERON:0002049!1.95e-15!79;UBERON:0007798!1.95e-15!79;UBERON:0001009!1.27e-14!113;UBERON:0000055!2.20e-13!69;UBERON:0004535!1.85e-12!110;UBERON:0003914!4.89e-12!118;UBERON:0007023!8.08e-10!115;UBERON:0001986!6.09e-09!18;UBERON:0004638!6.09e-09!18;UBERON:0004852!6.09e-09!18;UBERON:0000966!1.27e-08!5;UBERON:0005388!1.27e-08!5;UBERON:0001802!1.27e-08!5;UBERON:0001637!2.19e-08!42;UBERON:0003509!2.19e-08!42;UBERON:0004572!2.19e-08!42;UBERON:0000487!2.84e-08!22;UBERON:0000119!3.92e-08!312;UBERON:0007625!5.05e-08!11;UBERON:0000483!5.76e-08!309;UBERON:0000025!9.77e-08!194;UBERON:0001310!3.02e-07!4;UBERON:0000970!3.12e-07!20;UBERON:0006914!6.33e-07!25;UBERON:0002104!9.06e-07!21 | |ontology_enrichment_uberon=UBERON:0004872!6.94e-18!84;UBERON:0001981!9.28e-17!60;UBERON:0007500!9.28e-17!60;UBERON:0004537!9.28e-17!60;UBERON:0006965!9.28e-17!60;UBERON:0002049!1.95e-15!79;UBERON:0007798!1.95e-15!79;UBERON:0001009!1.27e-14!113;UBERON:0000055!2.20e-13!69;UBERON:0004535!1.85e-12!110;UBERON:0003914!4.89e-12!118;UBERON:0007023!8.08e-10!115;UBERON:0001986!6.09e-09!18;UBERON:0004638!6.09e-09!18;UBERON:0004852!6.09e-09!18;UBERON:0000966!1.27e-08!5;UBERON:0005388!1.27e-08!5;UBERON:0001802!1.27e-08!5;UBERON:0001637!2.19e-08!42;UBERON:0003509!2.19e-08!42;UBERON:0004572!2.19e-08!42;UBERON:0000487!2.84e-08!22;UBERON:0000119!3.92e-08!312;UBERON:0007625!5.05e-08!11;UBERON:0000483!5.76e-08!309;UBERON:0000025!9.77e-08!194;UBERON:0001310!3.02e-07!4;UBERON:0000970!3.12e-07!20;UBERON:0006914!6.33e-07!25;UBERON:0002104!9.06e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0003978;6.86e-29;3!UBERON:0000946;6.86e-29;3!UBERON:0002133;7.17e-20;2!UBERON:0007100;3.38e-13;25!UBERON:0002135;8.20e-11;1!UBERON:0002146;8.20e-11;1!UBERON:0002134;8.20e-11;1!UBERON:0005208;8.20e-11;1!UBERON:0005623;8.20e-11;1!UBERON:0004145;8.20e-11;1!UBERON:0005946;8.20e-11;1!UBERON:0005965;8.20e-11;1!UBERON:0002078;8.20e-11;1!UBERON:0000948;1.21e-10;22!UBERON:0010313;4.37e-09;10!UBERON:0000966;1.66e-08;5!UBERON:0005388;1.66e-08;5!UBERON:0001802;1.66e-08;5 | |ontology_enrichment_uberon_v019=UBERON:0003978;6.86e-29;3!UBERON:0000946;6.86e-29;3!UBERON:0002133;7.17e-20;2!UBERON:0007100;3.38e-13;25!UBERON:0002135;8.20e-11;1!UBERON:0002146;8.20e-11;1!UBERON:0002134;8.20e-11;1!UBERON:0005208;8.20e-11;1!UBERON:0005623;8.20e-11;1!UBERON:0004145;8.20e-11;1!UBERON:0005946;8.20e-11;1!UBERON:0005965;8.20e-11;1!UBERON:0002078;8.20e-11;1!UBERON:0000948;1.21e-10;22!UBERON:0010313;4.37e-09;10!UBERON:0000966;1.66e-08;5!UBERON:0005388;1.66e-08;5!UBERON:0001802;1.66e-08;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,1.98e-29,3;UBERON:0009751,1.98e-29,3;UBERON:0000946,1.98e-29,3;UBERON:0002523,1.98e-29,3;UBERON:0005983,1.98e-29,3;UBERON:0002165,1.98e-29,3;UBERON:0002062,1.98e-29,3;UBERON:0007280,1.98e-29,3;UBERON:0002133,2.26e-20,2;UBERON:0004797,5.61e-13,7;UBERON:0007100,3.44e-12,27;UBERON:0002135,3.76e-11,1;UBERON:0002134,5.57e-11,1;UBERON:0005208,5.57e-11,1;UBERON:0005946,5.57e-11,1;UBERON:0005965,5.57e-11,1;UBERON:0002078,5.57e-11,1;UBERON:0002146,7.46e-11,1;UBERON:0005623,7.46e-11,1;UBERON:0000948,9.42e-10,24;UBERON:0005498,9.42e-10,24;UBERON:0004140,9.42e-10,24;UBERON:0009881,9.42e-10,24;UBERON:0004141,9.42e-10,24;UBERON:0003084,9.42e-10,24;UBERON:0007005,9.42e-10,24;UBERON:0004139,9.42e-10,24;UBERON:0004291,9.42e-10,24;UBERON:0010313,3.04e-09,10;UBERON:0002342,3.04e-09,10;UBERON:0005062,3.04e-09,10;UBERON:0000966,3.36e-07,6;UBERON:0005388,3.36e-07,6;UBERON:0001802,3.36e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0.672325146451775,0,0,0.487932798790507,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.443458794925128,0.263504357079378,0.130979075497713,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0.56530794192401,0.419499436209906,0.825354125820202,0.417989933073621,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0.446498641420399,0.44905874525234,0.337834441449967,0,0,0.366403487860815,0,0,0,0.496971951695318,0.506522046658319,0,0,0,0,1.06748995729705,0.49333509683432,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0,0,0.389748020644795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0.528290604079356,0,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0.499864955910285,0,0,0,0,0,0,0.289562613335158,0.821905290201534,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0.154209693802656,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0.769350375349168,0.328014645699706,1.30151357865721,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0.55597265731176,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0.405820753925408,0.6196469961995,0.845086807596724,0.143411352204052,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39473591775749,0,0,0,0,0,0,0,0,0.591860433821602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0.227884111694002,0,0,0,0,0,0,0,0,2.16075186470203,0,0,0,0,1.43042921082341,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.581934098930517,0,0.225980740780532,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95497680890578,1.3749625440701,1.43574604915363,0.599037001496973,1.28767814440971,0.223171457441873,1.00775208730089,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0.104909176269996,0,0,0,0,0.662091970365432,0,1.62899880526114,0.864221491201268,0.326587360109409,0,0,0,0.226624183040251,0,0,0.129282956361551,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,1.63205341010842,1.0027595760908,0.306345576763462,0.327872630709804,0,0,0,0,0,0.221858103073705,0.124192805882767,1.10678907948985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,2.08698024724694,0,0,0,0.909243296012797,0.322231671127465,0,0,0.400027764663154,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,1.00885116665647,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,1.28657779517981,0.158013611732727,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.205325613712494,0,0.485710993059139,0,0,0,0,0,0,0.154348316215889,0,0,1.22574160876953,0,0,0,0,0.169927114687817,2.53756578545605,0.386747327841463,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0.0645889098360061,0,0,0.12729431655633,0.202117188958219,0,0,0.0673520530145875,0.215166616178029,0,0,0,0,0,2.34640942403454,0.244482888365733,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0.672325146451775,0,0,0.487932798790507,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.443458794925128,0.263504357079378,0.130979075497713,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0.56530794192401,0.419499436209906,0.825354125820202,0.417989933073621,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0.446498641420399,0.44905874525234,0.337834441449967,0,0,0.366403487860815,0,0,0,0.496971951695318,0.506522046658319,0,0,0,0,1.06748995729705,0.49333509683432,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0,0,0.389748020644795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0.528290604079356,0,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0.499864955910285,0,0,0,0,0,0,0.289562613335158,0.821905290201534,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0.154209693802656,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0.769350375349168,0.328014645699706,1.30151357865721,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0.55597265731176,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0.405820753925408,0.6196469961995,0.845086807596724,0.143411352204052,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39473591775749,0,0,0,0,0,0,0,0,0.591860433821602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0.227884111694002,0,0,0,0,0,0,0,0,2.16075186470203,0,0,0,0,1.43042921082341,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.581934098930517,0,0.225980740780532,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95497680890578,1.3749625440701,1.43574604915363,0.599037001496973,1.28767814440971,0.223171457441873,1.00775208730089,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0.104909176269996,0,0,0,0,0.662091970365432,0,1.62899880526114,0.864221491201268,0.326587360109409,0,0,0,0.226624183040251,0,0,0.129282956361551,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,1.63205341010842,1.0027595760908,0.306345576763462,0.327872630709804,0,0,0,0,0,0.221858103073705,0.124192805882767,1.10678907948985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,2.08698024724694,0,0,0,0.909243296012797,0.322231671127465,0,0,0.400027764663154,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,1.00885116665647,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,1.28657779517981,0.158013611732727,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.205325613712494,0,0.485710993059139,0,0,0,0,0,0,0.154348316215889,0,0,1.22574160876953,0,0,0,0,0.169927114687817,2.53756578545605,0.386747327841463,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0.0645889098360061,0,0,0.12729431655633,0.202117188958219,0,0,0.0673520530145875,0.215166616178029,0,0,0,0,0,2.34640942403454,0.244482888365733,0,0,0.201273793591026,0 | ||
|short_description=p30@TNS1 | |short_description=p30@TNS1 | ||
}} | }} |
Latest revision as of 15:20, 24 September 2015
Short description: | p30@TNS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_TNS1_5end |
Coexpression cluster: | NA |
Association with transcript: | -375bp_to_ENST00000423413_5end |
EntrezGene: | TNS1 |
HGNC: | 11973 |
UniProt: | C9J8K5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
valve | 1.98e-29 | 3 |
cardiac mesenchyme | 1.98e-29 | 3 |
cardial valve | 1.98e-29 | 3 |
tunica intima | 1.98e-29 | 3 |
heart layer | 1.98e-29 | 3 |
endocardium | 1.98e-29 | 3 |
endocardial cushion | 1.98e-29 | 3 |
presumptive endocardium | 1.98e-29 | 3 |
atrioventricular valve | 2.26e-20 | 2 |
blood vessel layer | 5.61e-13 | 7 |
primary circulatory organ | 3.44e-12 | 27 |
mitral valve | 3.76e-11 | 1 |
tricuspid valve | 5.57e-11 | 1 |
right atrium valve | 5.57e-11 | 1 |
outflow tract of atrium | 5.57e-11 | 1 |
outflow part of right atrium | 5.57e-11 | 1 |
right cardiac atrium | 5.57e-11 | 1 |
pulmonary valve | 7.46e-11 | 1 |
semi-lunar valve | 7.46e-11 | 1 |
heart | 9.42e-10 | 24 |
primitive heart tube | 9.42e-10 | 24 |
primary heart field | 9.42e-10 | 24 |
anterior lateral plate mesoderm | 9.42e-10 | 24 |
heart tube | 9.42e-10 | 24 |
heart primordium | 9.42e-10 | 24 |
cardiac mesoderm | 9.42e-10 | 24 |
cardiogenic plate | 9.42e-10 | 24 |
heart rudiment | 9.42e-10 | 24 |
neural crest-derived structure | 3.04e-09 | 10 |
neural crest | 3.04e-09 | 10 |
neural fold | 3.04e-09 | 10 |
retina | 3.36e-07 | 6 |
photoreceptor array | 3.36e-07 | 6 |
posterior segment of eyeball | 3.36e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
chronic myeloid leukemia | 3.08e-11 | 1 |