FFCP PHASE1:Hg19::chr2:218770151..218770162,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7145 | |EntrezGene=7145 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11973 | |HGNC=11973 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=21bp_to_AK310169_5end | |association_with_transcript=21bp_to_AK310169_5end | ||
|cluster_id=chr2:218770151..218770162,- | |||
|coexpression_cluster_id=C1893 | |||
|description=CAGE_peak_12_at_TNS1_5end | |description=CAGE_peak_12_at_TNS1_5end | ||
|id=chr2:218770151..218770162,- | |id=chr2:218770151..218770162,- | ||
|ontology_enrichment_celltype=CL:0000839!3.00e-15!70;CL:0000557!9.71e-14!71;CL:0000766!2.67e-12!76;CL:0002274!8.82e-11!5;CL:0000457!8.82e-11!5;CL:0002191!8.82e-11!5;CL:0000097!8.82e-11!5;CL:0000831!8.82e-11!5;CL:0002028!8.82e-11!5;CL:0002194!6.47e-10!63;CL:0000576!6.47e-10!63;CL:0000040!6.47e-10!63;CL:0000559!6.47e-10!63;CL:0002009!2.03e-09!65;CL:0000763!1.56e-08!112;CL:0000049!1.56e-08!112;CL:0002619!3.40e-07!3 | |ontology_enrichment_celltype=CL:0000839!3.00e-15!70;CL:0000557!9.71e-14!71;CL:0000766!2.67e-12!76;CL:0002274!8.82e-11!5;CL:0000457!8.82e-11!5;CL:0002191!8.82e-11!5;CL:0000097!8.82e-11!5;CL:0000831!8.82e-11!5;CL:0002028!8.82e-11!5;CL:0002194!6.47e-10!63;CL:0000576!6.47e-10!63;CL:0000040!6.47e-10!63;CL:0000559!6.47e-10!63;CL:0002009!2.03e-09!65;CL:0000763!1.56e-08!112;CL:0000049!1.56e-08!112;CL:0002619!3.40e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000097;8.52e-24;5!CL:0002619;3.25e-15;3!CL:0000163;4.24e-13;9!CL:0000235;1.41e-12;6!CL:0000148;1.30e-10;10!CL:0000766;1.46e-07;69!CL:0000147;1.65e-07;14!CL:0002567;8.43e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,6.77e-24,5;CL:0002028,6.77e-24,5;CL:0002619,3.25e-15,3;CL:0000839,5.83e-14,66;CL:0000557,1.06e-13,67;CL:0000163,3.75e-13,9;CL:0000235,1.55e-12,6;CL:0000766,1.63e-12,72;CL:0000148,1.38e-10,10;CL:0000541,1.38e-10,10;CL:0000763,2.74e-08,108;CL:0000049,2.74e-08,108;CL:0000147,1.71e-07,14;CL:0002194,5.18e-07,59;CL:0000576,5.18e-07,59;CL:0000040,5.18e-07,59;CL:0000559,5.18e-07,59;CL:0002567,6.96e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;1.84e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.84e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.00e-42!115;UBERON:0002390!9.51e-17!102;UBERON:0003061!9.51e-17!102;UBERON:0002193!3.21e-15!112;UBERON:0002371!3.10e-12!80;UBERON:0001474!8.26e-11!86;UBERON:0004765!4.80e-08!101;UBERON:0001434!4.80e-08!101;UBERON:0003081!1.33e-07!216;UBERON:0000178!1.41e-07!15;UBERON:0000179!1.41e-07!15;UBERON:0000463!1.41e-07!15;UBERON:0002405!2.37e-07!115;UBERON:0002298!3.70e-07!8 | |ontology_enrichment_uberon=UBERON:0007023!6.00e-42!115;UBERON:0002390!9.51e-17!102;UBERON:0003061!9.51e-17!102;UBERON:0002193!3.21e-15!112;UBERON:0002371!3.10e-12!80;UBERON:0001474!8.26e-11!86;UBERON:0004765!4.80e-08!101;UBERON:0001434!4.80e-08!101;UBERON:0003081!1.33e-07!216;UBERON:0000178!1.41e-07!15;UBERON:0000179!1.41e-07!15;UBERON:0000463!1.41e-07!15;UBERON:0002405!2.37e-07!115;UBERON:0002298!3.70e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.47e-19;15!UBERON:0000179;9.47e-19;15!UBERON:0000463;9.47e-19;15!UBERON:0007100;4.43e-08;25!UBERON:0002390;1.01e-07;32!UBERON:0004151;4.71e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.75e-21,98;UBERON:0003061,2.75e-21,98;UBERON:0002193,8.26e-19,108;UBERON:0000178,9.15e-19,15;UBERON:0000179,9.15e-19,15;UBERON:0000463,9.15e-19,15;UBERON:0007023,1.71e-12,114;UBERON:0002371,1.12e-11,76;UBERON:0003081,2.84e-11,203;UBERON:0001474,1.42e-10,82;UBERON:0004765,2.46e-09,90;UBERON:0002405,6.31e-09,93;UBERON:0001434,4.55e-08,100;UBERON:0007100,2.05e-07,27;UBERON:0004151,5.16e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,6.71746422719773,14.2513213048351,7.46969146139141,2.18097358169347,0.755751887377619,0.485168122375632,0,0.822335776043652,0.619412741790207,0,0,0,0,0,1.35426486594342,1.50593871634084,1.91034305040492,0.224723484445085,0.306083892370903,0.962787081228281,0.639337125799041,0.329851300186716,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.67812311566055,0.468008530278475,0.743155811443641,0,0,0,0,0,0,2.95597942737566,4.75461543671421,14.3056399723133,10.8089965062721,15.9065466117239,1.0159663086747,3.81988425558278,0,1.71072446022705,0.308482478109971,1.20137223137567,1.42913216315289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86495122564762,6.02708509718552,2.10833939483032,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.522870902049801,0,0,0,0,0,0,0,0,0,0,0,0,0.413509717453592,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,5.58192370155386,8.41100927856613,2.84823593587081,3.33524485640905,3.29089818468955,5.83625980073446,7.56044012133361,6.34500141035416,0,0,0,0,0,0,0,0.399158742865633,0,0,0,0,1.59764275323235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3441308683503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0.183195186803725,0.533034776018635,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0,0,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0,0.558564802544508,1.83328339209347,0.717873024576814,3.39454300848285,10.7306512034143,4.68660060627932,4.03100834920358,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.236417121897595,0,0,0,0,2.1440859791201,5.29673576292345,0,0,0,0,0,0,0,0,0,0,0,0.52893040697076,0,0,0.747511887973863,0.314408610199332,1.24271716604159,0.496166021811951,0,0,0,0.544017803369474,1.0027595760908,0.306345576763462,0,0,0,0,0.1251909307065,0,1.10929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.638535436228605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0,0,0,0.496211178389294,0,0,0,0,0,0,0.266107110487916,0,0,0.135939465953663,0.0657727735628491,0,0,0.549451649953598,0,0,0,0,0,1.6439605160631,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.490296643507811,0,0,2.37637120261669,0.4226557275834,0,0,0,0,0,0,0,0,0,1.14671666521161,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0.724030971033267,0.213233981900981,0,0,0.124149428591716,0,0,0.202117188958219,0.435433495793923,0,0,0.143444410785353,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,6.71746422719773,14.2513213048351,7.46969146139141,2.18097358169347,0.755751887377619,0.485168122375632,0,0.822335776043652,0.619412741790207,0,0,0,0,0,1.35426486594342,1.50593871634084,1.91034305040492,0.224723484445085,0.306083892370903,0.962787081228281,0.639337125799041,0.329851300186716,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.67812311566055,0.468008530278475,0.743155811443641,0,0,0,0,0,0,2.95597942737566,4.75461543671421,14.3056399723133,10.8089965062721,15.9065466117239,1.0159663086747,3.81988425558278,0,1.71072446022705,0.308482478109971,1.20137223137567,1.42913216315289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86495122564762,6.02708509718552,2.10833939483032,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.522870902049801,0,0,0,0,0,0,0,0,0,0,0,0,0.413509717453592,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,5.58192370155386,8.41100927856613,2.84823593587081,3.33524485640905,3.29089818468955,5.83625980073446,7.56044012133361,6.34500141035416,0,0,0,0,0,0,0,0.399158742865633,0,0,0,0,1.59764275323235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3441308683503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0.183195186803725,0.533034776018635,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0,0,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0,0.558564802544508,1.83328339209347,0.717873024576814,3.39454300848285,10.7306512034143,4.68660060627932,4.03100834920358,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.236417121897595,0,0,0,0,2.1440859791201,5.29673576292345,0,0,0,0,0,0,0,0,0,0,0,0.52893040697076,0,0,0.747511887973863,0.314408610199332,1.24271716604159,0.496166021811951,0,0,0,0.544017803369474,1.0027595760908,0.306345576763462,0,0,0,0,0.1251909307065,0,1.10929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.638535436228605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0,0,0,0.496211178389294,0,0,0,0,0,0,0.266107110487916,0,0,0.135939465953663,0.0657727735628491,0,0,0.549451649953598,0,0,0,0,0,1.6439605160631,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.490296643507811,0,0,2.37637120261669,0.4226557275834,0,0,0,0,0,0,0,0,0,1.14671666521161,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0.724030971033267,0.213233981900981,0,0,0.124149428591716,0,0,0.202117188958219,0.435433495793923,0,0,0.143444410785353,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0.402547587182052,0 | ||
|short_description=p12@TNS1 | |short_description=p12@TNS1 | ||
}} | }} |
Latest revision as of 15:10, 24 September 2015
Short description: | p12@TNS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_TNS1_5end |
Coexpression cluster: | C1893_Mast_CD14_heart_Monocytederived_Melanocyte_Macrophage_left |
Association with transcript: | 21bp_to_AK310169_5end |
EntrezGene: | TNS1 |
HGNC: | 11973 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 6.77e-24 | 5 |
basophil mast progenitor cell | 6.77e-24 | 5 |
adult endothelial progenitor cell | 3.25e-15 | 3 |
myeloid lineage restricted progenitor cell | 5.83e-14 | 66 |
granulocyte monocyte progenitor cell | 1.06e-13 | 67 |
endocrine cell | 3.75e-13 | 9 |
macrophage | 1.55e-12 | 6 |
myeloid leukocyte | 1.63e-12 | 72 |
melanocyte | 1.38e-10 | 10 |
melanoblast | 1.38e-10 | 10 |
myeloid cell | 2.74e-08 | 108 |
common myeloid progenitor | 2.74e-08 | 108 |
pigment cell | 1.71e-07 | 14 |
monopoietic cell | 5.18e-07 | 59 |
monocyte | 5.18e-07 | 59 |
monoblast | 5.18e-07 | 59 |
promonocyte | 5.18e-07 | 59 |
light melanocyte | 6.96e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.75e-21 | 98 |
blood island | 2.75e-21 | 98 |
hemolymphoid system | 8.26e-19 | 108 |
blood | 9.15e-19 | 15 |
haemolymphatic fluid | 9.15e-19 | 15 |
organism substance | 9.15e-19 | 15 |
adult organism | 1.71e-12 | 114 |
bone marrow | 1.12e-11 | 76 |
lateral plate mesoderm | 2.84e-11 | 203 |
bone element | 1.42e-10 | 82 |
skeletal element | 2.46e-09 | 90 |
immune system | 6.31e-09 | 93 |
skeletal system | 4.55e-08 | 100 |
primary circulatory organ | 2.05e-07 | 27 |
cardiac chamber | 5.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.84e-10 | 2 |