FFCP PHASE1:Hg19::chr2:218766600..218766625,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7145 | |EntrezGene=7145 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11973 | |HGNC=11973 | ||
|TSSclassifier=strong | |||
|UniProt=C9JFT7 | |UniProt=C9JFT7 | ||
|association_with_transcript=106bp_to_ENST00000439083_5end | |association_with_transcript=106bp_to_ENST00000439083_5end | ||
|cluster_id=chr2:218766600..218766625,- | |||
|coexpression_cluster_id=C4184 | |coexpression_cluster_id=C4184 | ||
|description=CAGE_peak_10_at_TNS1_5end | |description=CAGE_peak_10_at_TNS1_5end | ||
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|ontology_enrichment_celltype=CL:0000680!4.14e-10!57;CL:0000056!4.14e-10!57;CL:0000355!4.14e-10!57;CL:0000048!1.03e-08!430;CL:0000187!2.36e-08!54;CL:0000723!3.78e-08!436;CL:0000192!7.55e-08!42;CL:0000514!7.55e-08!42;CL:0002334!7.86e-08!12;CL:0000034!1.96e-07!444;CL:0000183!5.88e-07!59 | |ontology_enrichment_celltype=CL:0000680!4.14e-10!57;CL:0000056!4.14e-10!57;CL:0000355!4.14e-10!57;CL:0000048!1.03e-08!430;CL:0000187!2.36e-08!54;CL:0000723!3.78e-08!436;CL:0000192!7.55e-08!42;CL:0000514!7.55e-08!42;CL:0002334!7.86e-08!12;CL:0000034!1.96e-07!444;CL:0000183!5.88e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002334;3.93e-11;12!CL:0002579;2.99e-10;3!CL:0002580;5.13e-09;3!CL:0000860;3.62e-08;33!CL:0002057;3.62e-08;33 | |ontology_enrichment_celltype_v019=CL:0002334;3.93e-11;12!CL:0002579;2.99e-10;3!CL:0002580;5.13e-09;3!CL:0000860;3.62e-08;33!CL:0002057;3.62e-08;33 | ||
|ontology_enrichment_celltype_v019_2=CL:0002334,2.89e-11,12;CL:0002579,2.54e-10,3;CL:0002580,2.96e-09,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;8.19e-10;14 | |ontology_enrichment_disease_v019=DOID:2394;8.19e-10;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,8.64e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0002385!1.82e-10!63;UBERON:0001015!1.82e-10!63;UBERON:0000383!1.82e-10!63;UBERON:0000926!2.39e-10!448;UBERON:0004120!2.39e-10!448;UBERON:0006603!2.39e-10!448;UBERON:0001134!1.09e-09!61;UBERON:0002036!1.09e-09!61;UBERON:0003082!1.09e-09!61;UBERON:0004573!2.01e-09!33;UBERON:0004571!2.01e-09!33;UBERON:0003914!8.85e-09!118;UBERON:0004872!1.57e-08!84;UBERON:0007100!5.52e-08!27;UBERON:0003081!1.07e-07!216;UBERON:0003688!1.16e-07!6;UBERON:0002358!1.16e-07!6;UBERON:0003684!1.16e-07!6;UBERON:0001178!1.16e-07!6;UBERON:0002204!1.52e-07!167;UBERON:0001637!1.83e-07!42;UBERON:0003509!1.83e-07!42;UBERON:0004572!1.83e-07!42;UBERON:0002100!2.48e-07!216;UBERON:0004290!3.14e-07!70;UBERON:0000490!3.18e-07!138;UBERON:0000948!3.80e-07!24;UBERON:0005498!3.80e-07!24;UBERON:0004140!3.80e-07!24;UBERON:0009881!3.80e-07!24;UBERON:0004141!3.80e-07!24;UBERON:0003084!3.80e-07!24;UBERON:0007005!3.80e-07!24;UBERON:0004139!3.80e-07!24;UBERON:0004291!3.80e-07!24;UBERON:0001135!7.62e-07!15 | |ontology_enrichment_uberon=UBERON:0002385!1.82e-10!63;UBERON:0001015!1.82e-10!63;UBERON:0000383!1.82e-10!63;UBERON:0000926!2.39e-10!448;UBERON:0004120!2.39e-10!448;UBERON:0006603!2.39e-10!448;UBERON:0001134!1.09e-09!61;UBERON:0002036!1.09e-09!61;UBERON:0003082!1.09e-09!61;UBERON:0004573!2.01e-09!33;UBERON:0004571!2.01e-09!33;UBERON:0003914!8.85e-09!118;UBERON:0004872!1.57e-08!84;UBERON:0007100!5.52e-08!27;UBERON:0003081!1.07e-07!216;UBERON:0003688!1.16e-07!6;UBERON:0002358!1.16e-07!6;UBERON:0003684!1.16e-07!6;UBERON:0001178!1.16e-07!6;UBERON:0002204!1.52e-07!167;UBERON:0001637!1.83e-07!42;UBERON:0003509!1.83e-07!42;UBERON:0004572!1.83e-07!42;UBERON:0002100!2.48e-07!216;UBERON:0004290!3.14e-07!70;UBERON:0000490!3.18e-07!138;UBERON:0000948!3.80e-07!24;UBERON:0005498!3.80e-07!24;UBERON:0004140!3.80e-07!24;UBERON:0009881!3.80e-07!24;UBERON:0004141!3.80e-07!24;UBERON:0003084!3.80e-07!24;UBERON:0007005!3.80e-07!24;UBERON:0004139!3.80e-07!24;UBERON:0004291!3.80e-07!24;UBERON:0001135!7.62e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;4.86e-13;6!UBERON:0002358;4.86e-13;6!UBERON:0003684;4.86e-13;6!UBERON:0001178;4.86e-13;6!UBERON:0004457;1.52e-08;9!UBERON:0000042;1.52e-08;9!UBERON:0000991;8.36e-08;21!UBERON:0002081;8.87e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0003688;4.86e-13;6!UBERON:0002358;4.86e-13;6!UBERON:0003684;4.86e-13;6!UBERON:0001178;4.86e-13;6!UBERON:0004457;1.52e-08;9!UBERON:0000042;1.52e-08;9!UBERON:0000991;8.36e-08;21!UBERON:0002081;8.87e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.65e-13,6;UBERON:0002358,4.65e-13,6;UBERON:0003684,4.65e-13,6;UBERON:0001178,4.65e-13,6;UBERON:0002323,1.72e-09,46;UBERON:0004458,1.04e-08,49;UBERON:0000926,4.03e-08,315;UBERON:0004120,4.03e-08,315;UBERON:0006603,4.03e-08,315;UBERON:0000991,8.03e-08,21;UBERON:0009196,8.03e-08,21;UBERON:0009117,8.03e-08,21;UBERON:0005564,8.03e-08,21;UBERON:0003886,1.31e-07,54;UBERON:0004176,2.11e-07,22;UBERON:0002081,8.65e-07,2;UBERON:0010227,8.65e-07,2 | |||
|phase1_expression=1.09007027562334,0,4.93340414335899,2.00146596706261,0.446961094427288,0.872338524100369,0,0.631719873426831,1.04474251279935,1.96587149201207,0.697801167972428,0,0,0,0,0,0.602694528023977,1.46062018077475,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0.601633342410425,0,0,0,0.257575567634187,2.90796477559129,2.64513160582167,5.57943340731977,0.929716147622738,0.822335776043652,0.619412741790207,0,0.256160706529101,0,0.689491361473237,0,0,2.63539275359647,3.547779950752,1.57306439111559,1.83650335422542,2.56743221660875,0,0.329851300186716,0.797854630486527,0,0.290209238628584,1.70215567407342,1.86846674698672,0,0,0,1.21079900526674,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0,0,0,0.973269740605272,0,0,0,4.06035134042909,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,2.98183171017191,0.759783069987479,0.264818361626438,0.286836620748814,0,0.560677600142307,1.06748995729705,0.24666754841716,0,0.538842688278752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0.453728732640084,0.179389635688862,0,0.423863802319124,0,0,0.257640540045629,0,0.337552664482532,0.292311015483596,0.504867548488229,0,0,0,0,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,4.20725321410337,0.8231480226628,2.94017422771084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.297262324577456,0,0,0,0,0,0,0,0,0.414656231081544,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,2.32689088364,0,0,7.44626726437637,3.12022310734098,0,0,0,0.142977993658148,0,0,0,0.710783897485092,0,0,0,0,0,0,0,0.479249710983165,0,0,0.723906533337896,1.2328579353023,2.86497541183833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0.117141414992713,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48107807818777,1.99500565274481,1.68396056659844,3.58789617915963,4.60536524160033,5.62988724002626,0,0.308419387605311,1.24293207719189,0.164254312027618,0,0.348631135379878,0,0,0,0.34444334449382,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650756789328606,1.854738209659,0,0,0,0,3.21367859688319,0.580024309752732,0,0.15350367472613,0.689182862422653,0.107420244868274,0,0.255679882248303,0,0,0,0,0,0.464845549297286,0.62962469366128,0.6970372701606,0.308033580176089,1.59691809095107,0,1.66791797193528,0.429374660225974,0,0,0,0.255897791311334,0.42793898803392,0,3.13979456079692,0,0.274537029736055,0.353437207037059,0.808729926293264,1.58510321173008,2.52755073743389,0.48763373908959,0.243713489631284,0,0.136499911407986,0.424216295861138,0,0.551365343546124,0,0.876901770507525,0,0,0.202910376962704,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,1.7887322147588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,5.57894367102995,0,0,0,0.369254416383208,2.48831670129446,0,0,0.511572370226872,1.1837208676432,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,1.46205491157214,0,0,0,0,0.31900115973192,1.19076871422421,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.353830258013357,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,4.29765441419957,0,0,0.687481272035051,3.58936512288407,0.798716001995964,1.28767814440971,0,0.134366944973453,6.48539790376326,0,0.393915911536118,0.0824158583811665,0.202210631562555,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.472091293214983,0,0,0,1.42939065274673,0.662091970365432,0,0,0.864221491201268,0,0,0,0,0,0.293104467356165,0,0,0,0,0,5.23258321581704,4.24451623769098,7.87054205159671,0,0.197611631897944,0,0,0,0.5013797880454,0.306345576763462,0,0,0,0.122026264901963,0.250381861413,0,0,0.18628920882415,0,0,0,0,0,0,0,0.298509605773748,1.40227985908335,0.554805861502613,0,0,0.889811221596536,0,0,0.621748802331122,0.443565449968902,1.91156120596443,0,1.08684069813382,0,2.12673371646396,12.0001364216699,0,0.380805212168795,0.406870733204662,4.54621648006399,0.429642228169954,5.56840511854192,9.15620544006817,0.800055529326307,1.03018711554838,0.336749488765919,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90802610392051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0.376051641746286,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0.266107110487916,0,0.685952037749674,0.0679697329768317,0.0657727735628491,0,0,1.88383422841234,0,0,0,1.07963795609311,0,0.428859265059938,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0.62041277132864,0,0,0,0,0,1.12929087541872,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.490296643507811,0,0.196308467114945,0,0,1.35941691750254,0,0,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0,0,0.4621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| ||
|short_description=p10@TNS1 | |short_description=p10@TNS1 | ||
}} | }} |
Latest revision as of 15:03, 24 September 2015
Short description: | p10@TNS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_TNS1_5end |
Coexpression cluster: | C4184_mesenchymal_Mesenchymal_aorta_lung_CD14_Adipocyte_Preadipocyte |
Association with transcript: | 106bp_to_ENST00000439083_5end |
EntrezGene: | TNS1 |
HGNC: | 11973 |
UniProt: | C9JFT7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 2.89e-11 | 12 |
omentum preadipocyte | 2.54e-10 | 3 |
preadipocyte of the breast | 2.96e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 4.65e-13 | 6 |
peritoneum | 4.65e-13 | 6 |
abdominal cavity | 4.65e-13 | 6 |
visceral peritoneum | 4.65e-13 | 6 |
body cavity | 1.72e-09 | 46 |
body cavity or lining | 1.04e-08 | 49 |
mesoderm | 4.03e-08 | 315 |
mesoderm-derived structure | 4.03e-08 | 315 |
presumptive mesoderm | 4.03e-08 | 315 |
gonad | 8.03e-08 | 21 |
indifferent external genitalia | 8.03e-08 | 21 |
indifferent gonad | 8.03e-08 | 21 |
gonad primordium | 8.03e-08 | 21 |
body cavity precursor | 1.31e-07 | 54 |
external genitalia | 2.11e-07 | 22 |
cardiac atrium | 8.65e-07 | 2 |
future cardiac atrium | 8.65e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.64e-10 | 14 |