FFCP PHASE1:Hg19::chr4:109088089..109088101,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51176 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6551 | |||
|TSSclassifier=strong | |||
|UniProt=D6RAB1,B7Z8E2,E9PDK3,Q659G9,Q9UJU2 | |||
|association_with_transcript=-136bp_to_ENST00000515500,NM_001166119_5end | |||
|cluster_id=chr4:109088089..109088101,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_11_at_LEF1_5end | |||
|id=chr4:109088089..109088101,- | |||
|ontology_enrichment_celltype=CL:0000791!1.77e-20!18;CL:0000789!1.77e-20!18;CL:0002420!1.77e-20!18;CL:0002419!1.77e-20!18;CL:0000790!1.77e-20!18;CL:0000542!1.92e-20!53;CL:0000051!1.92e-20!53;CL:0000838!1.51e-19!52;CL:0000084!7.52e-19!25;CL:0000827!7.52e-19!25;CL:0000625!1.23e-14!11;CL:0000037!1.45e-09!172;CL:0000566!1.45e-09!172;CL:0000738!1.63e-09!140;CL:0002087!1.78e-09!119;CL:0000624!4.67e-09!6;CL:0000988!1.17e-08!182;CL:0002032!3.15e-08!165;CL:0000837!3.15e-08!165 | |||
|ontology_enrichment_celltype_v019=CL:0000791;6.44e-46;18!CL:0000789;6.44e-46;18!CL:0002419;6.44e-46;18!CL:0000084;2.21e-44;25!CL:0000625;1.10e-31;11!CL:0000624;8.90e-19;6!CL:0000542;3.21e-18;53!CL:0000898;2.28e-10;3!CL:0000226;2.46e-09;3!CL:0000842;2.46e-09;3!CL:0000623;6.88e-09;3!CL:0000815;9.61e-08;2!CL:0000792;9.61e-08;2!CL:0002677;9.61e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,8.94e-46,18;CL:0000789,8.94e-46,18;CL:0002420,8.94e-46,18;CL:0002419,8.94e-46,18;CL:0000790,8.94e-46,18;CL:0000084,3.02e-44,25;CL:0000827,3.02e-44,25;CL:0000542,1.06e-33,53;CL:0000051,1.06e-33,53;CL:0000838,7.84e-32,52;CL:0000625,1.42e-31,11;CL:0000624,9.76e-19,6;CL:0002087,3.44e-16,115;CL:0000738,8.96e-16,136;CL:0000037,4.73e-13,168;CL:0000988,6.05e-12,177;CL:0002031,1.00e-10,120;CL:0000898,2.36e-10,3;CL:0002032,3.38e-10,161;CL:0000837,3.38e-10,161;CL:0000226,2.29e-09,3;CL:0000842,2.29e-09,3;CL:0000623,7.18e-09,3;CL:0000825,7.18e-09,3;CL:0000815,9.77e-08,2;CL:0000792,9.77e-08,2;CL:0002677,9.77e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000790;6.44e-46;18!CL:0000051;3.21e-18;53 | |||
|ontology_enrichment_disease=DOID:1036!9.77e-07!8 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.21e-11!115;UBERON:0000178!5.99e-09!15;UBERON:0000179!5.99e-09!15;UBERON:0000463!5.99e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.72e-17;15!UBERON:0000179;4.72e-17;15!UBERON:0000463;4.72e-17;15!UBERON:0002390;2.16e-09;32!UBERON:0002193;2.22e-07;42!UBERON:0002370;2.53e-07;2!UBERON:0005058;2.53e-07;2!UBERON:0009113;2.53e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.24e-17,15;UBERON:0000179,4.24e-17,15;UBERON:0000463,4.24e-17,15;UBERON:0002370,1.52e-07,4;UBERON:0005058,1.52e-07,4;UBERON:0009113,1.52e-07,4;UBERON:0003295,1.52e-07,4;UBERON:0005562,1.52e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0.786728553697808,1.91914699048606,0.464448369948228,0,0,0,0,0,0,1.10799081706375,0.601633342410425,0.651032612147555,0.223915474239924,0.971680998056939,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1384259382189,0.587237189370939,0.382273228125229,0,0,0,8.06510057466716,6.6811829667358,8.01845846098086,12.0374276681288,17.2738801315803,12.7830907548378,19.4826728407911,1.11410456885174,15.0249012812167,15.5073726208535,18.143858872256,0.512365278902701,1.04047478047903,7.72858151637278,6.35605040907451,10.7227141721969,12.7526444319372,8.56130649887082,14.6349733326968,3.73920830901968,4.21542542962113,7.90343124610049,7.84361045260459,5.73417745783374,13.0216690771284,7.60361635558699,7.22760571573309,9.21503600311812,11.2437653897111,7.34009481336452,5.74789597844733,4.23374160771938,2.13952156626806,3.62061009706997,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0.117434498643765,0.161872944368132,0.280901613404497,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7658523976586,0,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.763976851116555,0,0,0.308482478109971,0.600686115687835,0.285826432630578,0.336393253036082,0,0.2933531432838,0,0,0,0,0,0.514414748524284,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57624608161542,3.01878604803324,2.43851768931522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,6.40980880980951,3.45142721309787,2.77491650288955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.05958087385735,0,2.27858874869665,3.33524485640905,2.87953591160336,3.8908398671563,2.70015718619057,0.79312517629427,0,0,0,2.41544127663434,1.44269212976445,7.5410353949319,1.4348364545594,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66614393599564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.295930216910801,2.3948309234694,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,8.17546385565892,0.627921025580099,2.32696354660219,0.451191321234361,0.19606253431774,0.335643173951685,0,3.65554131654871,0,0,0.141353071433941,0.649165919226273,0,0,0,0,0,0,0.067401132980677,0,0.468528891450678,0.182454789215666,0,0,0,2.41981432097328,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0.19871461170299,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0.203996435272644,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.903017728242729,0,0,0,0,0,0.39669780522807,0,0,0.320362237703084,0.471612915298998,0,3.96932817449561,1.97611631897944,1.70509637733254,0,0,0,0,0,0.314108192500469,0,0,0.3755727921195,0,0.110929051536852,0.248385611765534,0,0,0.758245587708239,3.14011866899464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.65284295507395,0,0,0.3062454773532,0.0642292250964595,0,0.159633859057151,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0.596748666348824,0.0752103283492573,0,0,0,0,0,0.202612753855184,0,0,0.0634158101939068,0,0.548257766857182,0,0,0,0.535701835878287,0,0,0.227662191351298,0.0887023701626388,0.230467975111559,0,0.203909198930495,0.0657727735628491,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0.11294608203896,0,0.150962843566674,0.231522474323834,0,0,0,0,0,0,0,0,0.469919589899268,0.515663103788617,0.999411559249289,0,0,0,0,0,0,0,0.135982980381829,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0.535928260312357,0,0.103432995861895,0,0,8.97785846720485,7.32481628691123,0.224263725161227,0,0,0.217716747896961,0,2.22261774948139,0.215166616178029,0.99798106963804,0.0814032686109745,0,0,0,0,0.122241444182866,0.406896178315738,0,5.03184483977566,0.320568492303233 | |||
|short_description=p11@LEF1 | |||
}} |
Latest revision as of 14:54, 24 September 2015
Short description: | p11@LEF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_LEF1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -136bp_to_ENST00000515500, NM_001166119_5end |
EntrezGene: | LEF1 |
HGNC: | 6551 |
UniProt: | D6RAB1B7Z8E2E9PDK3Q659G9Q9UJU2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 8.94e-46 | 18 |
alpha-beta T cell | 8.94e-46 | 18 |
immature T cell | 8.94e-46 | 18 |
mature T cell | 8.94e-46 | 18 |
immature alpha-beta T cell | 8.94e-46 | 18 |
T cell | 3.02e-44 | 25 |
pro-T cell | 3.02e-44 | 25 |
lymphocyte | 1.06e-33 | 53 |
common lymphoid progenitor | 1.06e-33 | 53 |
lymphoid lineage restricted progenitor cell | 7.84e-32 | 52 |
CD8-positive, alpha-beta T cell | 1.42e-31 | 11 |
CD4-positive, alpha-beta T cell | 9.76e-19 | 6 |
nongranular leukocyte | 3.44e-16 | 115 |
leukocyte | 8.96e-16 | 136 |
hematopoietic stem cell | 4.73e-13 | 168 |
hematopoietic cell | 6.05e-12 | 177 |
hematopoietic lineage restricted progenitor cell | 1.00e-10 | 120 |
naive T cell | 2.36e-10 | 3 |
hematopoietic oligopotent progenitor cell | 3.38e-10 | 161 |
hematopoietic multipotent progenitor cell | 3.38e-10 | 161 |
single nucleate cell | 2.29e-09 | 3 |
mononuclear cell | 2.29e-09 | 3 |
natural killer cell | 7.18e-09 | 3 |
pro-NK cell | 7.18e-09 | 3 |
regulatory T cell | 9.77e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 9.77e-08 | 2 |
naive regulatory T cell | 9.77e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 4.24e-17 | 15 |
haemolymphatic fluid | 4.24e-17 | 15 |
organism substance | 4.24e-17 | 15 |
thymus | 1.52e-07 | 4 |
hemolymphoid system gland | 1.52e-07 | 4 |
thymic region | 1.52e-07 | 4 |
pharyngeal gland | 1.52e-07 | 4 |
thymus primordium | 1.52e-07 | 4 |