FFCP PHASE1:Hg19::chr18:72922811..72922827,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10194 | |EntrezGene=10194 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10669 | |HGNC=10669 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZSZ6 | |UniProt=Q6ZSZ6 | ||
|association_with_transcript=80bp_to_NM_005786,uc002lly.2_5end | |association_with_transcript=80bp_to_NM_005786,uc002lly.2_5end | ||
|cluster_id=chr18:72922811..72922827,+ | |||
|description=CAGE_peak_1_at_TSHZ1_5end | |description=CAGE_peak_1_at_TSHZ1_5end | ||
|id=chr18:72922811..72922827,+ | |id=chr18:72922811..72922827,+ | ||
|ontology_enrichment_celltype=CL:0000791!5.36e-07!18;CL:0000789!5.36e-07!18;CL:0002420!5.36e-07!18;CL:0002419!5.36e-07!18;CL:0000790!5.36e-07!18 | |ontology_enrichment_celltype=CL:0000791!5.36e-07!18;CL:0000789!5.36e-07!18;CL:0002420!5.36e-07!18;CL:0002419!5.36e-07!18;CL:0000790!5.36e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000791;4.06e-07;18!CL:0000789;4.06e-07;18!CL:0002419;4.06e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.98e-07,18;CL:0000789,4.98e-07,18;CL:0002420,4.98e-07,18;CL:0002419,4.98e-07,18;CL:0000790,4.98e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000790;4.06e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.46e-37!115;UBERON:0001049!5.40e-22!57;UBERON:0005068!5.40e-22!57;UBERON:0006241!5.40e-22!57;UBERON:0007135!5.40e-22!57;UBERON:0000955!3.74e-18!69;UBERON:0006238!3.74e-18!69;UBERON:0002616!4.12e-18!59;UBERON:0001017!6.31e-17!82;UBERON:0003080!1.17e-15!42;UBERON:0005743!1.54e-15!86;UBERON:0002780!4.73e-15!41;UBERON:0001890!4.73e-15!41;UBERON:0006240!4.73e-15!41;UBERON:0000073!7.23e-14!94;UBERON:0001016!7.23e-14!94;UBERON:0002020!1.48e-12!34;UBERON:0003528!1.48e-12!34;UBERON:0001893!1.81e-12!34;UBERON:0002791!3.69e-12!33;UBERON:0001869!6.07e-12!32;UBERON:0002346!2.71e-11!90;UBERON:0003075!2.80e-11!86;UBERON:0007284!2.80e-11!86;UBERON:0002619!6.99e-11!22;UBERON:0001950!5.67e-10!20;UBERON:0000956!1.77e-09!25;UBERON:0000203!1.77e-09!25;UBERON:0003076!1.30e-07!15;UBERON:0003057!1.30e-07!15;UBERON:0003056!3.02e-07!61;UBERON:0000153!6.70e-07!129;UBERON:0007811!6.70e-07!129 | |ontology_enrichment_uberon=UBERON:0007023!1.46e-37!115;UBERON:0001049!5.40e-22!57;UBERON:0005068!5.40e-22!57;UBERON:0006241!5.40e-22!57;UBERON:0007135!5.40e-22!57;UBERON:0000955!3.74e-18!69;UBERON:0006238!3.74e-18!69;UBERON:0002616!4.12e-18!59;UBERON:0001017!6.31e-17!82;UBERON:0003080!1.17e-15!42;UBERON:0005743!1.54e-15!86;UBERON:0002780!4.73e-15!41;UBERON:0001890!4.73e-15!41;UBERON:0006240!4.73e-15!41;UBERON:0000073!7.23e-14!94;UBERON:0001016!7.23e-14!94;UBERON:0002020!1.48e-12!34;UBERON:0003528!1.48e-12!34;UBERON:0001893!1.81e-12!34;UBERON:0002791!3.69e-12!33;UBERON:0001869!6.07e-12!32;UBERON:0002346!2.71e-11!90;UBERON:0003075!2.80e-11!86;UBERON:0007284!2.80e-11!86;UBERON:0002619!6.99e-11!22;UBERON:0001950!5.67e-10!20;UBERON:0000956!1.77e-09!25;UBERON:0000203!1.77e-09!25;UBERON:0003076!1.30e-07!15;UBERON:0003057!1.30e-07!15;UBERON:0003056!3.02e-07!61;UBERON:0000153!6.70e-07!129;UBERON:0007811!6.70e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0000073;3.06e-11;53!UBERON:0002616;3.06e-11;53!UBERON:0002780;3.99e-11;41!UBERON:0001890;3.99e-11;41!UBERON:0002619;6.74e-11;22!UBERON:0001869;7.41e-11;32!UBERON:0002791;7.84e-11;32!UBERON:0003528;8.23e-11;34!UBERON:0002020;8.23e-11;34!UBERON:0001893;1.49e-10;34!UBERON:0007023;1.74e-10;114!UBERON:0001950;5.60e-10;20!UBERON:0000956;1.85e-09;25!UBERON:0000203;1.85e-09;25!UBERON:0001017;1.70e-08;75!UBERON:0000955;2.88e-08;68!UBERON:0001016;2.22e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.01e-37,114;UBERON:0001049,1.77e-21,56;UBERON:0005068,1.77e-21,56;UBERON:0006241,1.77e-21,56;UBERON:0007135,1.77e-21,56;UBERON:0000073,1.15e-19,53;UBERON:0002616,1.15e-19,53;UBERON:0000955,1.13e-17,68;UBERON:0006238,1.13e-17,68;UBERON:0001017,7.64e-17,81;UBERON:0002780,3.95e-15,41;UBERON:0001890,3.95e-15,41;UBERON:0003080,3.95e-15,41;UBERON:0006240,3.95e-15,41;UBERON:0001016,6.25e-15,89;UBERON:0003528,1.28e-12,34;UBERON:0002020,1.28e-12,34;UBERON:0001893,1.57e-12,34;UBERON:0002346,4.44e-12,86;UBERON:0002791,4.94e-12,32;UBERON:0003075,5.13e-12,82;UBERON:0007284,5.13e-12,82;UBERON:0001869,5.29e-12,32;UBERON:0002619,6.18e-11,22;UBERON:0001950,5.07e-10,20;UBERON:0000956,1.59e-09,25;UBERON:0000203,1.59e-09,25;UBERON:0003076,1.20e-07,15;UBERON:0003057,1.20e-07,15;UBERON:0003056,4.92e-07,61 | |||
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| ||
|short_description=p1@TSHZ1 | |short_description=p1@TSHZ1 | ||
}} | }} |
Latest revision as of 14:48, 24 September 2015
Short description: | p1@TSHZ1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TSHZ1_5end |
Coexpression cluster: | NA |
Association with transcript: | 80bp_to_NM_005786, uc002lly.2_5end |
EntrezGene: | TSHZ1 |
HGNC: | 10669 |
UniProt: | Q6ZSZ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.98e-07 | 18 |
alpha-beta T cell | 4.98e-07 | 18 |
immature T cell | 4.98e-07 | 18 |
mature T cell | 4.98e-07 | 18 |
immature alpha-beta T cell | 4.98e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.01e-37 | 114 |
neural tube | 1.77e-21 | 56 |
neural rod | 1.77e-21 | 56 |
future spinal cord | 1.77e-21 | 56 |
neural keel | 1.77e-21 | 56 |
regional part of nervous system | 1.15e-19 | 53 |
regional part of brain | 1.15e-19 | 53 |
brain | 1.13e-17 | 68 |
future brain | 1.13e-17 | 68 |
central nervous system | 7.64e-17 | 81 |
regional part of forebrain | 3.95e-15 | 41 |
forebrain | 3.95e-15 | 41 |
anterior neural tube | 3.95e-15 | 41 |
future forebrain | 3.95e-15 | 41 |
nervous system | 6.25e-15 | 89 |
brain grey matter | 1.28e-12 | 34 |
gray matter | 1.28e-12 | 34 |
telencephalon | 1.57e-12 | 34 |
neurectoderm | 4.44e-12 | 86 |
regional part of telencephalon | 4.94e-12 | 32 |
neural plate | 5.13e-12 | 82 |
presumptive neural plate | 5.13e-12 | 82 |
cerebral hemisphere | 5.29e-12 | 32 |
regional part of cerebral cortex | 6.18e-11 | 22 |
neocortex | 5.07e-10 | 20 |
cerebral cortex | 1.59e-09 | 25 |
pallium | 1.59e-09 | 25 |
posterior neural tube | 1.20e-07 | 15 |
chordal neural plate | 1.20e-07 | 15 |
pre-chordal neural plate | 4.92e-07 | 61 |