FFCP PHASE1:Hg19::chr18:72922777..72922808,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10194 | |EntrezGene=10194 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10669 | |HGNC=10669 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZSZ6 | |UniProt=Q6ZSZ6 | ||
|association_with_transcript=46bp_to_NM_005786,uc002lly.2_5end | |association_with_transcript=46bp_to_NM_005786,uc002lly.2_5end | ||
|cluster_id=chr18:72922777..72922808,+ | |||
|description=CAGE_peak_2_at_TSHZ1_5end | |description=CAGE_peak_2_at_TSHZ1_5end | ||
|id=chr18:72922777..72922808,+ | |id=chr18:72922777..72922808,+ | ||
|ontology_enrichment_celltype=CL:0000037!1.48e-11!172;CL:0000566!1.48e-11!172;CL:0000738!1.49e-11!140;CL:0000988!2.04e-11!182;CL:0002032!9.44e-11!165;CL:0000837!9.44e-11!165;CL:0002087!1.19e-09!119;CL:0002031!1.48e-09!124;CL:0000791!7.95e-07!18;CL:0000789!7.95e-07!18;CL:0002420!7.95e-07!18;CL:0002419!7.95e-07!18;CL:0000790!7.95e-07!18 | |ontology_enrichment_celltype=CL:0000037!1.48e-11!172;CL:0000566!1.48e-11!172;CL:0000738!1.49e-11!140;CL:0000988!2.04e-11!182;CL:0002032!9.44e-11!165;CL:0000837!9.44e-11!165;CL:0002087!1.19e-09!119;CL:0002031!1.48e-09!124;CL:0000791!7.95e-07!18;CL:0000789!7.95e-07!18;CL:0002420!7.95e-07!18;CL:0002419!7.95e-07!18;CL:0000790!7.95e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000791;6.09e-07;18!CL:0000789;6.09e-07;18!CL:0002419;6.09e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.95e-12,136;CL:0000037,4.28e-12,168;CL:0000988,6.48e-12,177;CL:0002032,2.65e-11,161;CL:0000837,2.65e-11,161;CL:0002087,3.05e-10,115;CL:0002031,4.00e-10,120;CL:0000791,7.70e-07,18;CL:0000789,7.70e-07,18;CL:0002420,7.70e-07,18;CL:0002419,7.70e-07,18;CL:0000790,7.70e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000790;6.09e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.52e-31!115;UBERON:0001049!3.36e-20!57;UBERON:0005068!3.36e-20!57;UBERON:0006241!3.36e-20!57;UBERON:0007135!3.36e-20!57;UBERON:0002616!1.85e-17!59;UBERON:0000955!1.14e-16!69;UBERON:0006238!1.14e-16!69;UBERON:0003080!3.76e-16!42;UBERON:0002780!1.46e-15!41;UBERON:0001890!1.46e-15!41;UBERON:0006240!1.46e-15!41;UBERON:0001017!3.08e-15!82;UBERON:0005743!3.46e-14!86;UBERON:0000073!5.25e-13!94;UBERON:0001016!5.25e-13!94;UBERON:0001893!1.13e-12!34;UBERON:0002020!1.45e-12!34;UBERON:0003528!1.45e-12!34;UBERON:0002791!1.69e-12!33;UBERON:0001869!6.00e-12!32;UBERON:0003075!3.95e-11!86;UBERON:0007284!3.95e-11!86;UBERON:0002619!6.90e-11!22;UBERON:0002346!1.22e-10!90;UBERON:0001950!7.12e-10!20;UBERON:0000956!2.53e-09!25;UBERON:0000203!2.53e-09!25;UBERON:0003056!4.91e-08!61;UBERON:0000153!2.15e-07!129;UBERON:0007811!2.15e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.88e-11;41!UBERON:0001890;1.88e-11;41!UBERON:0002791;4.21e-11;32!UBERON:0001869;5.77e-11;32!UBERON:0002619;5.80e-11;22!UBERON:0003528;6.46e-11;34!UBERON:0002020;6.46e-11;34!UBERON:0001893;6.85e-11;34!UBERON:0000073;1.25e-10;53!UBERON:0002616;1.25e-10;53!UBERON:0001950;6.46e-10;20!UBERON:0000956;1.80e-09;25!UBERON:0000203;1.80e-09;25!UBERON:0007023;1.25e-08;114!UBERON:0001017;6.99e-08;75!UBERON:0000955;8.13e-08;68!UBERON:0001016;5.67e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.14e-31,114;UBERON:0001049,1.18e-19,56;UBERON:0005068,1.18e-19,56;UBERON:0006241,1.18e-19,56;UBERON:0007135,1.18e-19,56;UBERON:0000073,4.49e-18,53;UBERON:0002616,4.49e-18,53;UBERON:0000955,3.61e-16,68;UBERON:0006238,3.61e-16,68;UBERON:0002780,1.34e-15,41;UBERON:0001890,1.34e-15,41;UBERON:0003080,1.34e-15,41;UBERON:0006240,1.34e-15,41;UBERON:0001017,5.51e-15,81;UBERON:0001016,1.13e-13,89;UBERON:0001893,1.06e-12,34;UBERON:0003528,1.36e-12,34;UBERON:0002020,1.36e-12,34;UBERON:0002791,3.32e-12,32;UBERON:0001869,5.64e-12,32;UBERON:0002619,6.52e-11,22;UBERON:0003075,7.39e-11,82;UBERON:0007284,7.39e-11,82;UBERON:0002346,2.05e-10,86;UBERON:0001950,6.77e-10,20;UBERON:0000956,2.41e-09,25;UBERON:0000203,2.41e-09,25;UBERON:0003056,4.17e-08,61 | |||
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| ||
|short_description=p2@TSHZ1 | |short_description=p2@TSHZ1 | ||
}} | }} |
Latest revision as of 14:47, 24 September 2015
Short description: | p2@TSHZ1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TSHZ1_5end |
Coexpression cluster: | NA |
Association with transcript: | 46bp_to_NM_005786, uc002lly.2_5end |
EntrezGene: | TSHZ1 |
HGNC: | 10669 |
UniProt: | Q6ZSZ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 3.95e-12 | 136 |
hematopoietic stem cell | 4.28e-12 | 168 |
hematopoietic cell | 6.48e-12 | 177 |
hematopoietic oligopotent progenitor cell | 2.65e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.65e-11 | 161 |
nongranular leukocyte | 3.05e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 4.00e-10 | 120 |
mature alpha-beta T cell | 7.70e-07 | 18 |
alpha-beta T cell | 7.70e-07 | 18 |
immature T cell | 7.70e-07 | 18 |
mature T cell | 7.70e-07 | 18 |
immature alpha-beta T cell | 7.70e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 8.14e-31 | 114 |
neural tube | 1.18e-19 | 56 |
neural rod | 1.18e-19 | 56 |
future spinal cord | 1.18e-19 | 56 |
neural keel | 1.18e-19 | 56 |
regional part of nervous system | 4.49e-18 | 53 |
regional part of brain | 4.49e-18 | 53 |
brain | 3.61e-16 | 68 |
future brain | 3.61e-16 | 68 |
regional part of forebrain | 1.34e-15 | 41 |
forebrain | 1.34e-15 | 41 |
anterior neural tube | 1.34e-15 | 41 |
future forebrain | 1.34e-15 | 41 |
central nervous system | 5.51e-15 | 81 |
nervous system | 1.13e-13 | 89 |
telencephalon | 1.06e-12 | 34 |
brain grey matter | 1.36e-12 | 34 |
gray matter | 1.36e-12 | 34 |
regional part of telencephalon | 3.32e-12 | 32 |
cerebral hemisphere | 5.64e-12 | 32 |
regional part of cerebral cortex | 6.52e-11 | 22 |
neural plate | 7.39e-11 | 82 |
presumptive neural plate | 7.39e-11 | 82 |
neurectoderm | 2.05e-10 | 86 |
neocortex | 6.77e-10 | 20 |
cerebral cortex | 2.41e-09 | 25 |
pallium | 2.41e-09 | 25 |
pre-chordal neural plate | 4.17e-08 | 61 |