FFCP PHASE1:Hg19::chr19:5914213..5914286,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=828 | |EntrezGene=828 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1487 | |HGNC=1487 | ||
|TSSclassifier=strong | |||
|UniProt=Q13938,Q96ET4 | |UniProt=Q13938,Q96ET4 | ||
|association_with_transcript=20bp_to_ENST00000222125,ENST00000452990,NM_004058,NM_080590,uc002mdt.2,uc002mdu.2_5end | |association_with_transcript=20bp_to_ENST00000222125,ENST00000452990,NM_004058,NM_080590,uc002mdt.2,uc002mdu.2_5end | ||
|cluster_id=chr19:5914213..5914286,+ | |||
|description=CAGE_peak_1_at_CAPS_5end | |description=CAGE_peak_1_at_CAPS_5end | ||
|id=chr19:5914213..5914286,+ | |id=chr19:5914213..5914286,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000349;2.45e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.64e-08,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.47e-21!115;UBERON:0000033!8.57e-20!123;UBERON:0004121!2.53e-19!169;UBERON:0000153!2.76e-19!129;UBERON:0007811!2.76e-19!129;UBERON:0000924!1.20e-18!173;UBERON:0006601!1.20e-18!173;UBERON:0000475!8.34e-17!365;UBERON:0000062!9.25e-16!511;UBERON:0001049!1.08e-15!57;UBERON:0005068!1.08e-15!57;UBERON:0006241!1.08e-15!57;UBERON:0007135!1.08e-15!57;UBERON:0005743!3.21e-15!86;UBERON:0003075!5.77e-15!86;UBERON:0007284!5.77e-15!86;UBERON:0000481!8.42e-15!347;UBERON:0001017!1.16e-14!82;UBERON:0002346!4.99e-14!90;UBERON:0000064!7.85e-14!219;UBERON:0000955!2.18e-13!69;UBERON:0006238!2.18e-13!69;UBERON:0000468!1.17e-12!659;UBERON:0000073!2.08e-12!94;UBERON:0001016!2.08e-12!94;UBERON:0002616!3.78e-12!59;UBERON:0002780!9.97e-12!41;UBERON:0001890!9.97e-12!41;UBERON:0006240!9.97e-12!41;UBERON:0003080!4.71e-11!42;UBERON:0003056!6.33e-11!61;UBERON:0002020!6.14e-10!34;UBERON:0003528!6.14e-10!34;UBERON:0001893!1.46e-09!34;UBERON:0002791!1.95e-09!33;UBERON:0000467!3.79e-09!625;UBERON:0000480!5.63e-09!626;UBERON:0001869!1.50e-08!32;UBERON:0002050!2.93e-08!605;UBERON:0005423!2.93e-08!605;UBERON:0000922!3.46e-08!612;UBERON:0005631!5.26e-08!14;UBERON:0000158!5.26e-08!14;UBERON:0000923!5.88e-08!604;UBERON:0005291!5.88e-08!604;UBERON:0006598!5.88e-08!604;UBERON:0002532!5.88e-08!604;UBERON:0004119!9.11e-08!169;UBERON:0000925!9.11e-08!169;UBERON:0006595!9.11e-08!169;UBERON:0004111!1.38e-07!241;UBERON:0000483!1.41e-07!309;UBERON:0000477!1.64e-07!286;UBERON:0000119!4.49e-07!312;UBERON:0000478!5.56e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;7.45e-09;53!UBERON:0002616;7.45e-09;53!UBERON:0002780;9.29e-09;41!UBERON:0001890;9.29e-09;41!UBERON:0001893;1.73e-07;34!UBERON:0003528;2.21e-07;34!UBERON:0002020;2.21e-07;34!UBERON:0000478;2.67e-07;24!UBERON:0002791;4.37e-07;32!UBERON:0001869;6.32e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.98e-23,114;UBERON:0004121,3.56e-18,171;UBERON:0000924,3.56e-18,171;UBERON:0006601,3.56e-18,171;UBERON:0001049,3.22e-16,56;UBERON:0005068,3.22e-16,56;UBERON:0006241,3.22e-16,56;UBERON:0007135,3.22e-16,56;UBERON:0003075,6.75e-16,82;UBERON:0007284,6.75e-16,82;UBERON:0010371,3.28e-15,104;UBERON:0001017,3.68e-15,81;UBERON:0000073,1.82e-14,53;UBERON:0002616,1.82e-14,53;UBERON:0002346,3.12e-14,86;UBERON:0010314,1.03e-13,132;UBERON:0000955,4.96e-13,68;UBERON:0006238,4.96e-13,68;UBERON:0001016,1.22e-12,89;UBERON:0011216,9.04e-12,223;UBERON:0003056,4.28e-11,61;UBERON:0002780,9.27e-11,41;UBERON:0001890,9.27e-11,41;UBERON:0003080,9.27e-11,41;UBERON:0006240,9.27e-11,41;UBERON:0005631,2.41e-09,14;UBERON:0000158,2.41e-09,14;UBERON:0003528,4.33e-09,34;UBERON:0002020,4.33e-09,34;UBERON:0001893,1.09e-08,34;UBERON:0002791,6.91e-08,32;UBERON:0001869,1.49e-07,32;UBERON:0000478,2.92e-07,24;UBERON:0003124,3.08e-07,7;UBERON:0003076,5.57e-07,15;UBERON:0003057,5.57e-07,15 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0,0,0,0,0,0,0.522371256399677,4.91467873003018,43.2636724142905,99.8277070634887,215.233854234418,63.2446063625838,28.8315716883287,0,0,0,0,1.47745269692145,1.63200552995402,3.13454721478088,2.0036519099174,1.50561867580173,0.627713197974014,0,0,0,0,0,2.78669021968937,3.67768489791571,1.8072355126695,5.17655614233503,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0.605399502633369,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0.289803085735052,0,0.267540828089713,0,0.226618685395132,0,0,0,0,0,0.950452044448374,0,0,0,0,0,0,0,0,0,0,0.255725123687061,28.5536930383807,40.1070328508712,39.1085601194224,9.54343136461319,27.2515527369476,4.82127567536746,7.31707011626461,1.84453049955565,16.4378739749629,7.65020105414339,3.70784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,5.66922267785295,0.496971951695318,0.379891534993739,0,0.860509862246441,1.06400514659507,2.24271040056923,0,0.24666754841716,1.24484414159907,0.134710672069688,0,0,0,0.468642863667593,0,2.85235910772225,1.34503812496621,0,0,0,12.0450961040387,3.93069815397658,31.9276663833115,1.18800285728205,2.71993622206413,0,0,2.69337782326506,0.875829639103749,3.60183350129438,2.63386572528503,5.21029252858333,0.901428353439581,0.113432183160021,2.33206526395521,5.76604949810132,1.69545520927649,1.20036438433761,1.23663035086127,8.50213782150576,9.49195967291108,2.53164498361899,1.75386609290158,2.01947019395292,1.84099797284599,0.484938170456436,1.06502877754984,1.30977727695932,2.03472710772585,11.2091294834712,0.272746120590835,0.286804595389004,0,0,0,0.10366105501537,0,0,6.25798129319264,19.9404690839794,13.8134921352481,2.3218396401599,8.66255378003503,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,1.18157981336281,0,0.983907508344908,6.34800898104545,0.109750285408626,0,0,3.14800713539001,0,1.03993478527958,0,8.11512834825538,0.70445216541493,0,0,0.190254152234598,25.2865407346968,25.7545848628462,0,0,0,0.93733833986777,0,0.850650583454319,6.62733068001077,2.90633938513962,7.28427090413901,0,0,0,0,0,0.63497894292169,0.381988425558278,0,3.4214489204541,0.102827492703324,3.90445975197093,0,0,0,0,0.129271715757778,7.15312891703765,0,0.26593811658487,0,3.60090323966999,0,2.39779961114489,0,8.13932408087165,3.29296134712308,0,0.710783897485092,0.791951872933429,2.1100756394171,1.74306691720059,1.09970290300263,0,0,0,2.63587341040741,3.44585807502342,0,1.30303176000821,0.821905290201534,1.07436577943937,0,0,0.215627574859517,0,2.28685161800217,1.30139853857622,4.63973287666617,1.17261385734044,2.55175500661265,0,0,0,12.5145321553523,9.50323990013386,2.71265023699736,0,0.535286966391485,0.157702415033935,0,2.70851489754947,4.5481500811197,8.27784570340039,1.99267679560631,7.37476674166813,2.25897397617015,4.11182430671755,2.40200396667599,0,0,0.106727557803444,131.860493579123,537.586469618906,202.601496530886,0.496215615637554,0.306923946576125,0.280660094433074,1.28139149255701,0,0,2.96836132889982,0,0,0.410635780069046,0,0.464841513839837,0.120859449591622,5.41367469818869,0.368323955743585,0.229628896329213,0,0.131124414959424,22.5599806453706,5.77615028283111,1.56869953835371,1.46139224653261,0.949964660035881,0,0,0.215915916102139,0,1.35473218771926,2.50844886927427,4.58777291481069,12.4661401339309,6.71624264166535,0,0,1.02580050046556,0.656029291399411,1.30151357865721,16.692643886931,2.83865340936865,2.31026599777646,0,0,0,0.290012154876366,0.154048617114644,0,0,0.537101224341368,1.16013355131383,0.170453254832202,0,2.47927373041467,3.84380134730212,0.893288987462089,2.023155617111,0.464845549297286,0.62962469366128,0,0,0,0,2.59453906745488,0.429374660225974,0.372158369359667,0,0.38126038784765,3.83846686967001,5.99114583247489,1.27281299170375,0,0,0.823611089208164,0.235624804691373,0.202182481573316,1.58510321173008,0,0.48763373908959,0,0,0,0,1.13008116620243,0.551365343546124,0,0,1.73632660280006,0.655894752046633,0,0,0.281695602532241,0.573645408816206,0.88424136911809,0,0,3.37772216476263,17.7819242198347,0,0.349934720244983,2.88666338176536,4.69211592875051,1.08890984861323,17.1341717413738,25.3998169876026,57.2803017269927,47.0035962748876,27.7965314250421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,2.05111450980652,0,0,0,260.947721818295,138.38554126801,328.661951246178,3.97659059106519,14.6296193066933,0.111308705022906,0,0,38.0563657559543,3.86797481743607,0,0.409074730008619,0,0.933118762985422,5.39210106883961,0.895105873378046,1.02314474045374,13.0209295440752,0,0,2.90799823828566,9.46234601250883,5.98841394003583,0.7812832832557,0,0,3.30001000027949,52.8847592608954,0.472775363535873,0,0,0.173624994933292,84.1454316523147,27.2547951293422,0,0.221158519862449,3.84211904639612,29.8364140129403,0,0,22.7772765171239,0.341826167541004,0.6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| ||
|short_description=p1@CAPS | |short_description=p1@CAPS | ||
}} | }} |
Latest revision as of 14:35, 24 September 2015
Short description: | p1@CAPS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CAPS_5end |
Coexpression cluster: | NA |
Association with transcript: | 20bp_to_ENST00000222125, ENST00000452990, NM_004058, NM_080590, uc002mdt.2, uc002mdu.2_5end |
EntrezGene: | CAPS |
HGNC: | 1487 |
UniProt: | Q13938Q96ET4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.64e-08 | 19 |