FFCP PHASE1:Hg19::chr7:100454665..100454679,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56996 | |EntrezGene=56996 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17435 | |HGNC=17435 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=13bp_to_ENST00000497958_5end | |association_with_transcript=13bp_to_ENST00000497958_5end | ||
|cluster_id=chr7:100454665..100454679,+ | |||
|coexpression_cluster_id=C84 | |coexpression_cluster_id=C84 | ||
|description=CAGE_peak_11_at_SLC12A9_5end | |description=CAGE_peak_11_at_SLC12A9_5end | ||
|id=chr7:100454665..100454679,+ | |id=chr7:100454665..100454679,+ | ||
|ontology_enrichment_celltype=CL:0000039!3.62e-13!7;CL:0000586!3.62e-13!7;CL:0000349!2.12e-08!3;CL:0002577!2.12e-08!3;CL:0002541!3.06e-08!3 | |ontology_enrichment_celltype=CL:0000039!3.62e-13!7;CL:0000586!3.62e-13!7;CL:0000349!2.12e-08!3;CL:0002577!2.12e-08!3;CL:0002541!3.06e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000039;2.74e-29;7!CL:0000586;2.74e-29;7!CL:0000083;1.21e-13;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.74e-29,7;CL:0000586,2.74e-29,7;CL:0000083,1.29e-13,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:178!3.32e-07!1;DOID:326!3.32e-07!1;DOID:3978!3.32e-07!1;DOID:3394!3.32e-07!1;DOID:5844!3.32e-07!1;DOID:1799!3.52e-07!1;DOID:10165!3.52e-07!1;DOID:1798!3.52e-07!1 | |ontology_enrichment_disease=DOID:178!3.32e-07!1;DOID:326!3.32e-07!1;DOID:3978!3.32e-07!1;DOID:3394!3.32e-07!1;DOID:5844!3.32e-07!1;DOID:1799!3.52e-07!1;DOID:10165!3.52e-07!1;DOID:1798!3.52e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:1799;5.12e-50;1!DOID:10165;5.12e-50;1!DOID:178;5.12e-50;1!DOID:326;5.12e-50;1!DOID:3978;5.12e-50;1!DOID:3394;5.12e-50;1!DOID:5844;5.12e-50;1!DOID:1798;5.12e-50;1!DOID:114;8.10e-26;2!DOID:1287;1.21e-13;4!DOID:1793;1.21e-13;4!DOID:3095;4.14e-10;22!DOID:2994;4.14e-10;22!DOID:170;1.50e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:178,3.99e-50,1;DOID:326,3.99e-50,1;DOID:3978,3.99e-50,1;DOID:3394,3.99e-50,1;DOID:5844,3.99e-50,1;DOID:1799,6.58e-50,1;DOID:10165,6.58e-50,1;DOID:1798,6.58e-50,1;DOID:114,7.14e-26,2;DOID:1287,1.13e-13,4;DOID:1793,1.29e-13,4;DOID:3095,4.14e-10,22;DOID:2994,4.14e-10,22;DOID:170,1.57e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0005631!4.35e-24!14;UBERON:0000158!4.35e-24!14;UBERON:0003124!9.24e-20!7;UBERON:0000478!5.39e-17!24;UBERON:0001987!2.61e-13!4;UBERON:0004340!2.61e-13!4;UBERON:0000476!3.06e-08!3;UBERON:0000920!3.06e-08!3;UBERON:0004923!6.65e-08!57;UBERON:0000305!1.38e-07!7 | |ontology_enrichment_uberon=UBERON:0005631!4.35e-24!14;UBERON:0000158!4.35e-24!14;UBERON:0003124!9.24e-20!7;UBERON:0000478!5.39e-17!24;UBERON:0001987!2.61e-13!4;UBERON:0004340!2.61e-13!4;UBERON:0000476!3.06e-08!3;UBERON:0000920!3.06e-08!3;UBERON:0004923!6.65e-08!57;UBERON:0000305!1.38e-07!7 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p11@SLC12A9 | |short_description=p11@SLC12A9 | ||
}} | }} |
Latest revision as of 14:34, 24 September 2015
Short description: | p11@SLC12A9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SLC12A9_5end |
Coexpression cluster: | C84_choriocarcinoma_pancreatic_Wilms_Mallassezderived_thymus_salivary_colon |
Association with transcript: | 13bp_to_ENST00000497958_5end |
EntrezGene: | SLC12A9 |
HGNC: | 17435 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.74e-29 | 7 |
germ cell | 2.74e-29 | 7 |
epithelial cell of pancreas | 1.29e-13 | 4 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 3.99e-50 | 1 |
ischemia | 3.99e-50 | 1 |
extrinsic cardiomyopathy | 3.99e-50 | 1 |
myocardial ischemia | 3.99e-50 | 1 |
myocardial infarction | 3.99e-50 | 1 |
islet cell tumor | 6.58e-50 | 1 |
endocrine pancreas cancer | 6.58e-50 | 1 |
pancreatic endocrine carcinoma | 6.58e-50 | 1 |
heart disease | 7.14e-26 | 2 |
cardiovascular system disease | 1.13e-13 | 4 |
pancreatic cancer | 1.29e-13 | 4 |
germ cell and embryonal cancer | 4.14e-10 | 22 |
germ cell cancer | 4.14e-10 | 22 |
endocrine gland cancer | 1.57e-09 | 6 |