FFCP PHASE1:Hg19::chr18:72167109..72167133,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55748 | |EntrezGene=55748 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24437 | |HGNC=24437 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=13bp_to_uc002lln.1_5end | |association_with_transcript=13bp_to_uc002lln.1_5end | ||
|cluster_id=chr18:72167109..72167133,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_2_at_CNDP2_5end | |description=CAGE_peak_2_at_CNDP2_5end | ||
|id=chr18:72167109..72167133,+ | |id=chr18:72167109..72167133,+ | ||
|ontology_enrichment_celltype=CL:0000037!1.09e-31!172;CL:0000566!1.09e-31!172;CL:0002087!1.39e-31!119;CL:0000988!2.47e-31!182;CL:0000738!1.00e-30!140;CL:0002032!3.16e-30!165;CL:0000837!3.16e-30!165;CL:0002031!1.42e-28!124;CL:0002009!1.90e-28!65;CL:0002194!5.12e-28!63;CL:0000576!5.12e-28!63;CL:0000040!5.12e-28!63;CL:0000559!5.12e-28!63;CL:0002057!6.42e-26!42;CL:0000557!2.99e-25!71;CL:0000763!2.49e-24!112;CL:0000049!2.49e-24!112;CL:0000839!2.56e-24!70;CL:0000766!1.11e-23!76;CL:0000860!1.02e-22!45;CL:0000945!2.49e-07!24;CL:0000826!2.49e-07!24 | |ontology_enrichment_celltype=CL:0000037!1.09e-31!172;CL:0000566!1.09e-31!172;CL:0002087!1.39e-31!119;CL:0000988!2.47e-31!182;CL:0000738!1.00e-30!140;CL:0002032!3.16e-30!165;CL:0000837!3.16e-30!165;CL:0002031!1.42e-28!124;CL:0002009!1.90e-28!65;CL:0002194!5.12e-28!63;CL:0000576!5.12e-28!63;CL:0000040!5.12e-28!63;CL:0000559!5.12e-28!63;CL:0002057!6.42e-26!42;CL:0000557!2.99e-25!71;CL:0000763!2.49e-24!112;CL:0000049!2.49e-24!112;CL:0000839!2.56e-24!70;CL:0000766!1.11e-23!76;CL:0000860!1.02e-22!45;CL:0000945!2.49e-07!24;CL:0000826!2.49e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.17e-20;33!CL:0002057;2.17e-20;33!CL:0000473;3.01e-20;39!CL:0000234;3.01e-20;39!CL:0000576;4.04e-19;48!CL:0000766;8.52e-12;69!CL:0002087;4.74e-10;104!CL:0000763;9.65e-09;100!CL:0000738;4.10e-08;136!CL:0000945;4.59e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,6.00e-36,115;CL:0002009,9.70e-35,61;CL:0002194,2.51e-34,59;CL:0000576,2.51e-34,59;CL:0000040,2.51e-34,59;CL:0000559,2.51e-34,59;CL:0000037,3.15e-33,168;CL:0000738,6.87e-33,136;CL:0000988,3.35e-32,177;CL:0002032,7.73e-32,161;CL:0000837,7.73e-32,161;CL:0000473,7.94e-32,48;CL:0000234,7.94e-32,48;CL:0002031,2.77e-31,120;CL:0000557,3.49e-29,67;CL:0000839,3.91e-28,66;CL:0000860,7.05e-28,42;CL:0002057,7.05e-28,42;CL:0000766,1.07e-26,72;CL:0000763,2.45e-26,108;CL:0000049,2.45e-26,108;CL:0000945,5.52e-08,24;CL:0000826,5.52e-08,24;CL:0002393,6.07e-07,9;CL:0002397,6.07e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;3.69e-20;42!CL:0000049;1.67e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.14e-25!102;UBERON:0003061!3.14e-25!102;UBERON:0002193!1.31e-24!112;UBERON:0002371!1.63e-20!80;UBERON:0001474!3.05e-18!86;UBERON:0002405!1.09e-16!115;UBERON:0007023!2.65e-14!115;UBERON:0004765!7.62e-13!101;UBERON:0001434!7.62e-13!101;UBERON:0003081!6.17e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.04e-29,98;UBERON:0003061,3.04e-29,98;UBERON:0002193,2.85e-28,108;UBERON:0002405,7.78e-25,93;UBERON:0002371,3.24e-24,76;UBERON:0001474,1.30e-21,82;UBERON:0004765,1.98e-19,90;UBERON:0007023,8.88e-15,114;UBERON:0001434,1.25e-14,100;UBERON:0003081,3.19e-08,203 | |||
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| ||
|short_description=p2@CNDP2 | |short_description=p2@CNDP2 | ||
}} | }} |
Latest revision as of 14:08, 24 September 2015
Short description: | p2@CNDP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CNDP2_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 13bp_to_uc002lln.1_5end |
EntrezGene: | CNDP2 |
HGNC: | 24437 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 6.00e-36 | 115 |
macrophage dendritic cell progenitor | 9.70e-35 | 61 |
monopoietic cell | 2.51e-34 | 59 |
monocyte | 2.51e-34 | 59 |
monoblast | 2.51e-34 | 59 |
promonocyte | 2.51e-34 | 59 |
hematopoietic stem cell | 3.15e-33 | 168 |
leukocyte | 6.87e-33 | 136 |
hematopoietic cell | 3.35e-32 | 177 |
hematopoietic oligopotent progenitor cell | 7.73e-32 | 161 |
hematopoietic multipotent progenitor cell | 7.73e-32 | 161 |
defensive cell | 7.94e-32 | 48 |
phagocyte | 7.94e-32 | 48 |
hematopoietic lineage restricted progenitor cell | 2.77e-31 | 120 |
granulocyte monocyte progenitor cell | 3.49e-29 | 67 |
myeloid lineage restricted progenitor cell | 3.91e-28 | 66 |
classical monocyte | 7.05e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.05e-28 | 42 |
myeloid leukocyte | 1.07e-26 | 72 |
myeloid cell | 2.45e-26 | 108 |
common myeloid progenitor | 2.45e-26 | 108 |
lymphocyte of B lineage | 5.52e-08 | 24 |
pro-B cell | 5.52e-08 | 24 |
intermediate monocyte | 6.07e-07 | 9 |
CD14-positive, CD16-positive monocyte | 6.07e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.04e-29 | 98 |
blood island | 3.04e-29 | 98 |
hemolymphoid system | 2.85e-28 | 108 |
immune system | 7.78e-25 | 93 |
bone marrow | 3.24e-24 | 76 |
bone element | 1.30e-21 | 82 |
skeletal element | 1.98e-19 | 90 |
adult organism | 8.88e-15 | 114 |
skeletal system | 1.25e-14 | 100 |
lateral plate mesoderm | 3.19e-08 | 203 |