FFCP PHASE1:Hg19::chr11:77122928..77123045,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5058 | |EntrezGene=5058 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8590 | |HGNC=8590 | ||
|TSSclassifier=strong | |||
|UniProt=E9PM17,E9PMP2,E9PRP6,E9PKH9 | |UniProt=E9PM17,E9PMP2,E9PRP6,E9PKH9 | ||
|association_with_transcript=0bp_to_ENST00000528203,ENST00000528592,ENST00000528633,ENST00000529248,uc001oyi.1,uc010rso.1_5end | |association_with_transcript=0bp_to_ENST00000528203,ENST00000528592,ENST00000528633,ENST00000529248,uc001oyi.1,uc010rso.1_5end | ||
|cluster_id=chr11:77122928..77123045,- | |||
|coexpression_cluster_id=C1644 | |||
|description=CAGE_peak_1_at_PAK1_5end | |description=CAGE_peak_1_at_PAK1_5end | ||
|id=chr11:77122928..77123045,- | |id=chr11:77122928..77123045,- | ||
|ontology_enrichment_celltype=CL:0000763!4.05e-29!112;CL:0000049!4.05e-29!112;CL:0000766!4.59e-29!76;CL:0000557!2.71e-25!71;CL:0000839!5.70e-25!70;CL:0002009!2.09e-23!65;CL:0002194!5.13e-23!63;CL:0000576!5.13e-23!63;CL:0000040!5.13e-23!63;CL:0000559!5.13e-23!63;CL:0002057!1.76e-18!42;CL:0000860!3.60e-17!45;CL:0002032!2.27e-14!165;CL:0000837!2.27e-14!165;CL:0000037!4.43e-14!172;CL:0000566!4.43e-14!172;CL:0000738!8.76e-13!140;CL:0000988!2.77e-12!182;CL:0002031!1.82e-09!124;CL:0000723!4.67e-09!436;CL:0000034!4.77e-09!444;CL:0000048!8.51e-09!430;CL:0002087!1.35e-08!119;CL:0000134!3.49e-08!358;CL:0002320!1.46e-07!365;CL:0000219!1.91e-07!390 | |ontology_enrichment_celltype=CL:0000763!4.05e-29!112;CL:0000049!4.05e-29!112;CL:0000766!4.59e-29!76;CL:0000557!2.71e-25!71;CL:0000839!5.70e-25!70;CL:0002009!2.09e-23!65;CL:0002194!5.13e-23!63;CL:0000576!5.13e-23!63;CL:0000040!5.13e-23!63;CL:0000559!5.13e-23!63;CL:0002057!1.76e-18!42;CL:0000860!3.60e-17!45;CL:0002032!2.27e-14!165;CL:0000837!2.27e-14!165;CL:0000037!4.43e-14!172;CL:0000566!4.43e-14!172;CL:0000738!8.76e-13!140;CL:0000988!2.77e-12!182;CL:0002031!1.82e-09!124;CL:0000723!4.67e-09!436;CL:0000034!4.77e-09!444;CL:0000048!8.51e-09!430;CL:0002087!1.35e-08!119;CL:0000134!3.49e-08!358;CL:0002320!1.46e-07!365;CL:0000219!1.91e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000576;1.34e-13;48!CL:0000766;2.89e-13;69!CL:0000473;8.02e-13;39!CL:0000234;8.02e-13;39!CL:0000860;2.14e-12;33!CL:0002057;2.14e-12;33!CL:0000763;1.27e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.05e-30,72;CL:0000763,6.39e-30,108;CL:0000049,6.39e-30,108;CL:0000557,1.49e-26,67;CL:0000839,3.12e-26,66;CL:0002009,1.09e-24,61;CL:0002194,2.55e-24,59;CL:0000576,2.55e-24,59;CL:0000040,2.55e-24,59;CL:0000559,2.55e-24,59;CL:0000473,3.32e-21,48;CL:0000234,3.32e-21,48;CL:0000860,1.76e-18,42;CL:0002057,1.76e-18,42;CL:0002032,1.40e-14,161;CL:0000837,1.40e-14,161;CL:0000037,2.84e-14,168;CL:0000738,4.77e-13,136;CL:0000988,8.09e-13,177;CL:0002031,1.10e-09,120;CL:0000723,1.88e-09,433;CL:0000034,1.94e-09,441;CL:0000048,3.47e-09,427;CL:0002087,8.48e-09,115;CL:0000134,1.69e-08,354;CL:0002320,7.39e-08,361;CL:0000219,9.82e-08,386 | |||
|ontology_enrichment_development_v019=CL:0002057;2.19e-13;42!CL:0000049;1.48e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.57e-27!102;UBERON:0003061!1.57e-27!102;UBERON:0002371!3.44e-24!80;UBERON:0001474!4.29e-23!86;UBERON:0002204!1.93e-22!167;UBERON:0002193!7.24e-22!112;UBERON:0004765!6.30e-21!101;UBERON:0001434!6.30e-21!101;UBERON:0001049!2.38e-11!57;UBERON:0005068!2.38e-11!57;UBERON:0006241!2.38e-11!57;UBERON:0007135!2.38e-11!57;UBERON:0002616!7.35e-11!59;UBERON:0000955!1.05e-10!69;UBERON:0006238!1.05e-10!69;UBERON:0002619!2.35e-10!22;UBERON:0001869!1.39e-09!32;UBERON:0001950!1.49e-09!20;UBERON:0001017!1.62e-09!82;UBERON:0002780!1.88e-09!41;UBERON:0001890!1.88e-09!41;UBERON:0006240!1.88e-09!41;UBERON:0001893!4.54e-09!34;UBERON:0003080!5.56e-09!42;UBERON:0002405!6.11e-09!115;UBERON:0002020!8.73e-09!34;UBERON:0003528!8.73e-09!34;UBERON:0000479!1.21e-08!787;UBERON:0002791!1.57e-08!33;UBERON:0005743!2.70e-08!86;UBERON:0000956!4.75e-08!25;UBERON:0000203!4.75e-08!25;UBERON:0002384!5.74e-08!375;UBERON:0007023!1.08e-07!115;UBERON:0000073!2.36e-07!94;UBERON:0001016!2.36e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.62e-10;22!UBERON:0001950;1.65e-09;20!UBERON:0001869;1.64e-08;32!UBERON:0001893;3.86e-08;34!UBERON:0000956;5.45e-08;25!UBERON:0000203;5.45e-08;25!UBERON:0003528;9.68e-08;34!UBERON:0002020;9.68e-08;34!UBERON:0002791;1.24e-07;32!UBERON:0000073;4.03e-07;53!UBERON:0002616;4.03e-07;53!UBERON:0002780;8.53e-07;41!UBERON:0001890;8.53e-07;41 | |||
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| ||
|short_description=p1@PAK1 | |short_description=p1@PAK1 | ||
}} | }} |
Latest revision as of 13:51, 24 September 2015
Short description: | p1@PAK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PAK1_5end |
Coexpression cluster: | C1644_Neutrophils_Eosinophils_medial_amygdala_frontal_paracentral_insula |
Association with transcript: | 0bp_to_ENST00000528203, ENST00000528592, ENST00000528633, ENST00000529248, uc001oyi.1, uc010rso.1_5end |
EntrezGene: | PAK1 |
HGNC: | 8590 |
UniProt: | E9PM17E9PMP2E9PRP6E9PKH9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.05e-30 | 72 |
myeloid cell | 6.39e-30 | 108 |
common myeloid progenitor | 6.39e-30 | 108 |
granulocyte monocyte progenitor cell | 1.49e-26 | 67 |
myeloid lineage restricted progenitor cell | 3.12e-26 | 66 |
macrophage dendritic cell progenitor | 1.09e-24 | 61 |
monopoietic cell | 2.55e-24 | 59 |
monocyte | 2.55e-24 | 59 |
monoblast | 2.55e-24 | 59 |
promonocyte | 2.55e-24 | 59 |
defensive cell | 3.32e-21 | 48 |
phagocyte | 3.32e-21 | 48 |
classical monocyte | 1.76e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.76e-18 | 42 |
hematopoietic oligopotent progenitor cell | 1.40e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.40e-14 | 161 |
hematopoietic stem cell | 2.84e-14 | 168 |
leukocyte | 4.77e-13 | 136 |
hematopoietic cell | 8.09e-13 | 177 |
hematopoietic lineage restricted progenitor cell | 1.10e-09 | 120 |
somatic stem cell | 1.88e-09 | 433 |
stem cell | 1.94e-09 | 441 |
multi fate stem cell | 3.47e-09 | 427 |
nongranular leukocyte | 8.48e-09 | 115 |
mesenchymal cell | 1.69e-08 | 354 |
connective tissue cell | 7.39e-08 | 361 |
motile cell | 9.82e-08 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.96e-28 | 98 |
blood island | 1.96e-28 | 98 |
bone marrow | 3.09e-25 | 76 |
bone element | 5.21e-24 | 82 |
hemolymphoid system | 1.62e-22 | 108 |
musculoskeletal system | 5.76e-22 | 167 |
skeletal element | 1.62e-20 | 90 |
skeletal system | 2.45e-20 | 100 |
immune system | 1.47e-17 | 93 |
regional part of nervous system | 4.23e-12 | 53 |
regional part of brain | 4.23e-12 | 53 |
neural tube | 8.26e-12 | 56 |
neural rod | 8.26e-12 | 56 |
future spinal cord | 8.26e-12 | 56 |
neural keel | 8.26e-12 | 56 |
brain | 4.27e-11 | 68 |
future brain | 4.27e-11 | 68 |
regional part of cerebral cortex | 2.35e-10 | 22 |
central nervous system | 7.72e-10 | 81 |
cerebral hemisphere | 1.39e-09 | 32 |
neocortex | 1.49e-09 | 20 |
regional part of forebrain | 1.88e-09 | 41 |
forebrain | 1.88e-09 | 41 |
anterior neural tube | 1.88e-09 | 41 |
future forebrain | 1.88e-09 | 41 |
telencephalon | 4.54e-09 | 34 |
brain grey matter | 8.73e-09 | 34 |
gray matter | 8.73e-09 | 34 |
nervous system | 1.11e-08 | 89 |
regional part of telencephalon | 1.70e-08 | 32 |
connective tissue | 2.86e-08 | 371 |
tissue | 3.41e-08 | 773 |
cerebral cortex | 4.75e-08 | 25 |
pallium | 4.75e-08 | 25 |
adult organism | 2.26e-07 | 114 |