FFCP PHASE1:Hg19::chr17:40263911..40263923,-: Difference between revisions
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|id=chr17:40263911..40263923,-
|short_description=p6@DHX58
|description=CAGE_peak_6_at_DHX58_5end
|association_with_transcript=-1bp_to_CU677131,JF432115_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79132 | |EntrezGene=79132 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=29517 | |HGNC=29517 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-1bp_to_CU677131,JF432115_5end | |||
|cluster_id=chr17:40263911..40263923,- | |||
|coexpression_cluster_id=C678 | |||
|description=CAGE_peak_6_at_DHX58_5end | |||
|id=chr17:40263911..40263923,- | |||
|ontology_enrichment_celltype=CL:0000077!1.64e-10!19 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.03e-15;33!CL:0002057;2.03e-15;33!CL:0000473;5.62e-11;39!CL:0000234;5.62e-11;39!CL:0002593;8.33e-10;2!CL:0000576;2.08e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.27e-14,42;CL:0002057,5.27e-14,42;CL:0000473,3.11e-12,48;CL:0000234,3.11e-12,48;CL:0002593,8.69e-10,2;CL:0002194,9.54e-10,59;CL:0000576,9.54e-10,59;CL:0000040,9.54e-10,59;CL:0000559,9.54e-10,59;CL:0002009,2.00e-09,61;CL:0000839,1.05e-08,66;CL:0000557,1.42e-08,67;CL:0000766,5.73e-08,72 | |||
|ontology_enrichment_development_v019=CL:0002057;3.62e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002456;8.33e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,8.69e-10,2;UBERON:0002371,1.53e-07,76;UBERON:0001474,5.63e-07,82 | |||
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| ||
|short_description=p6@DHX58 | |||
}} | }} |
Latest revision as of 13:29, 24 September 2015
Short description: | p6@DHX58 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_DHX58_5end |
Coexpression cluster: | C678_Smooth_CD14_embryonic_mesothelioma_gall_Fibroblast_meningioma |
Association with transcript: | -1bp_to_CU677131, JF432115_5end |
EntrezGene: | DHX58 |
HGNC: | 29517 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.27e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.27e-14 | 42 |
defensive cell | 3.11e-12 | 48 |
phagocyte | 3.11e-12 | 48 |
smooth muscle cell of the internal thoracic artery | 8.69e-10 | 2 |
monopoietic cell | 9.54e-10 | 59 |
monocyte | 9.54e-10 | 59 |
monoblast | 9.54e-10 | 59 |
promonocyte | 9.54e-10 | 59 |
macrophage dendritic cell progenitor | 2.00e-09 | 61 |
myeloid lineage restricted progenitor cell | 1.05e-08 | 66 |
granulocyte monocyte progenitor cell | 1.42e-08 | 67 |
myeloid leukocyte | 5.73e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
internal thoracic artery | 8.69e-10 | 2 |
bone marrow | 1.53e-07 | 76 |
bone element | 5.63e-07 | 82 |