FFCP PHASE1:Hg19::chrX:19854476..19854495,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=30011 | |EntrezGene=30011 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=13867 | |HGNC=13867 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-75bp_to_AB590253,CU677457,DQ892387,DQ895600_5end | |association_with_transcript=-75bp_to_AB590253,CU677457,DQ892387,DQ895600_5end | ||
|cluster_id=chrX:19854476..19854495,- | |||
|coexpression_cluster_id=C36 | |coexpression_cluster_id=C36 | ||
|description=CAGE_peak_30_at_SH3KBP1_5end | |description=CAGE_peak_30_at_SH3KBP1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002274!1.04e-29!5;CL:0000457!1.04e-29!5;CL:0002191!1.04e-29!5;CL:0000097!1.04e-29!5;CL:0000831!1.04e-29!5;CL:0002028!1.04e-29!5;CL:0000163!1.84e-16!9;CL:0002127!9.10e-08!1;CL:0000914!9.10e-08!1;CL:0000911!9.10e-08!1;CL:0000814!9.10e-08!1;CL:0002042!9.10e-08!1;CL:0002039!9.10e-08!1;CL:0002040!9.10e-08!1;CL:0002041!9.10e-08!1;CL:0002032!3.02e-07!165;CL:0000837!3.02e-07!165;CL:0000037!8.12e-07!172;CL:0000566!8.12e-07!172 | |ontology_enrichment_celltype=CL:0002274!1.04e-29!5;CL:0000457!1.04e-29!5;CL:0002191!1.04e-29!5;CL:0000097!1.04e-29!5;CL:0000831!1.04e-29!5;CL:0002028!1.04e-29!5;CL:0000163!1.84e-16!9;CL:0002127!9.10e-08!1;CL:0000914!9.10e-08!1;CL:0000911!9.10e-08!1;CL:0000814!9.10e-08!1;CL:0002042!9.10e-08!1;CL:0002039!9.10e-08!1;CL:0002040!9.10e-08!1;CL:0002041!9.10e-08!1;CL:0002032!3.02e-07!165;CL:0000837!3.02e-07!165;CL:0000037!8.12e-07!172;CL:0000566!8.12e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.02e-15;24!CL:0000542;8.28e-07;53 | |ontology_enrichment_celltype_v019=CL:0000945;1.02e-15;24!CL:0000542;8.28e-07;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.02e-15,24;CL:0000826,1.02e-15,24;CL:0000838,6.81e-13,52;CL:0000542,1.16e-12,53;CL:0000051,1.16e-12,53 | |||
|ontology_enrichment_development_v019=CL:0000051;8.28e-07;53 | |ontology_enrichment_development_v019=CL:0000051;8.28e-07;53 | ||
|ontology_enrichment_disease=DOID:9119!1.25e-07!1;DOID:8552!2.35e-07!1;DOID:1240!5.14e-07!39 | |ontology_enrichment_disease=DOID:9119!1.25e-07!1;DOID:8552!2.35e-07!1;DOID:1240!5.14e-07!39 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!3.28e-08!7;UBERON:0002370!5.38e-07!4;UBERON:0005058!5.38e-07!4;UBERON:0009113!5.38e-07!4;UBERON:0003295!5.38e-07!4;UBERON:0005562!5.38e-07!4 | |ontology_enrichment_uberon=UBERON:0004177!3.28e-08!7;UBERON:0002370!5.38e-07!4;UBERON:0005058!5.38e-07!4;UBERON:0009113!5.38e-07!4;UBERON:0003295!5.38e-07!4;UBERON:0005562!5.38e-07!4 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p30@SH3KBP1 | |short_description=p30@SH3KBP1 | ||
}} | }} |
Latest revision as of 08:55, 20 September 2015
Short description: | p30@SH3KBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_SH3KBP1_5end |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | -75bp_to_AB590253, CU677457, DQ892387, DQ895600_5end |
EntrezGene: | SH3KBP1 |
HGNC: | 13867 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.02e-15 | 24 |
pro-B cell | 1.02e-15 | 24 |
lymphoid lineage restricted progenitor cell | 6.81e-13 | 52 |
lymphocyte | 1.16e-12 | 53 |
common lymphoid progenitor | 1.16e-12 | 53 |