FFCP PHASE1:Hg19::chr7:98972327..98972338,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10095 | |EntrezGene=10095 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=704 | |HGNC=704 | ||
|TSSclassifier=strong | |||
|UniProt=C9J4Z7 | |UniProt=C9J4Z7 | ||
|association_with_transcript=0bp_to_ENST00000455009,ENST00000484375,ENST00000484600,uc003upz.2_5end | |association_with_transcript=0bp_to_ENST00000455009,ENST00000484375,ENST00000484600,uc003upz.2_5end | ||
|cluster_id=chr7:98972327..98972338,+ | |||
|coexpression_cluster_id=C4710 | |||
|description=CAGE_peak_3_at_ARPC1B_5end | |description=CAGE_peak_3_at_ARPC1B_5end | ||
|id=chr7:98972327..98972338,+ | |id=chr7:98972327..98972338,+ | ||
|ontology_enrichment_celltype=CL:0002371!2.56e-44!591;CL:0000144!8.79e-40!625;CL:0000003!6.43e-37!722;CL:0000548!2.24e-30!679;CL:0000004!2.24e-30!679;CL:0000255!2.24e-30!679;CL:0000048!2.86e-30!430;CL:0000723!3.97e-30!436;CL:0000012!5.83e-30!682;CL:0000034!1.28e-27!444;CL:0000063!5.86e-24!578;CL:0002320!3.38e-23!365;CL:0000134!6.96e-23!358;CL:0000037!7.91e-23!172;CL:0000566!7.91e-23!172;CL:0000988!2.28e-22!182;CL:0002032!3.78e-22!165;CL:0000837!3.78e-22!165;CL:0002087!1.19e-21!119;CL:0000738!1.38e-21!140;CL:0002031!5.24e-19!124;CL:0000219!1.36e-17!390;CL:0000766!2.80e-17!76;CL:0002194!3.71e-17!63;CL:0000576!3.71e-17!63;CL:0000040!3.71e-17!63;CL:0000559!3.71e-17!63;CL:0000763!5.58e-17!112;CL:0000049!5.58e-17!112;CL:0002009!8.03e-17!65;CL:0000557!2.53e-15!71;CL:0000839!7.66e-15!70;CL:0002057!1.58e-12!42;CL:0000222!2.66e-12!119;CL:0000860!1.76e-10!45;CL:0002078!1.34e-07!44;CL:0000183!1.83e-07!59;CL:0000115!2.23e-07!35;CL:0000680!3.80e-07!57;CL:0000056!3.80e-07!57;CL:0000355!3.80e-07!57;CL:0000187!5.95e-07!54 | |ontology_enrichment_celltype=CL:0002371!2.56e-44!591;CL:0000144!8.79e-40!625;CL:0000003!6.43e-37!722;CL:0000548!2.24e-30!679;CL:0000004!2.24e-30!679;CL:0000255!2.24e-30!679;CL:0000048!2.86e-30!430;CL:0000723!3.97e-30!436;CL:0000012!5.83e-30!682;CL:0000034!1.28e-27!444;CL:0000063!5.86e-24!578;CL:0002320!3.38e-23!365;CL:0000134!6.96e-23!358;CL:0000037!7.91e-23!172;CL:0000566!7.91e-23!172;CL:0000988!2.28e-22!182;CL:0002032!3.78e-22!165;CL:0000837!3.78e-22!165;CL:0002087!1.19e-21!119;CL:0000738!1.38e-21!140;CL:0002031!5.24e-19!124;CL:0000219!1.36e-17!390;CL:0000766!2.80e-17!76;CL:0002194!3.71e-17!63;CL:0000576!3.71e-17!63;CL:0000040!3.71e-17!63;CL:0000559!3.71e-17!63;CL:0000763!5.58e-17!112;CL:0000049!5.58e-17!112;CL:0002009!8.03e-17!65;CL:0000557!2.53e-15!71;CL:0000839!7.66e-15!70;CL:0002057!1.58e-12!42;CL:0000222!2.66e-12!119;CL:0000860!1.76e-10!45;CL:0002078!1.34e-07!44;CL:0000183!1.83e-07!59;CL:0000115!2.23e-07!35;CL:0000680!3.80e-07!57;CL:0000056!3.80e-07!57;CL:0000355!3.80e-07!57;CL:0000187!5.95e-07!54 | ||
|ontology_enrichment_celltype_v019=CL:0000576;7.87e-10;48!CL:0000473;8.17e-10;39!CL:0000234;8.17e-10;39!CL:0000766;1.18e-08;69!CL:0000860;5.54e-08;33!CL:0002057;5.54e-08;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,7.38e-31,427;CL:0000723,1.07e-30,433;CL:0000034,3.73e-28,441;CL:0000037,3.37e-24,168;CL:0002320,6.78e-24,361;CL:0000134,1.38e-23,354;CL:0002032,1.57e-23,161;CL:0000837,1.57e-23,161;CL:0000988,2.12e-23,177;CL:0002087,2.32e-23,115;CL:0000738,4.16e-23,136;CL:0002031,1.61e-20,120;CL:0002194,1.81e-19,59;CL:0000576,1.81e-19,59;CL:0000040,1.81e-19,59;CL:0000559,1.81e-19,59;CL:0000766,2.71e-19,72;CL:0002009,4.81e-19,61;CL:0000763,1.77e-18,108;CL:0000049,1.77e-18,108;CL:0000219,3.41e-18,386;CL:0000557,2.93e-17,67;CL:0000839,9.42e-17,66;CL:0000473,3.76e-16,48;CL:0000234,3.76e-16,48;CL:0000860,1.57e-12,42;CL:0002057,1.57e-12,42;CL:0000222,2.52e-12,121;CL:0002078,7.96e-08,45;CL:0000115,1.31e-07,36;CL:0000680,6.22e-07,58;CL:0000056,6.22e-07,58;CL:0000355,6.22e-07,58;CL:0000187,9.80e-07,55 | |||
|ontology_enrichment_development_v019=CL:0002057;1.88e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.80e-27!216;UBERON:0002193!7.83e-22!112;UBERON:0002384!3.50e-21!375;UBERON:0002390!3.75e-21!102;UBERON:0003061!3.75e-21!102;UBERON:0002204!2.60e-18!167;UBERON:0002371!5.90e-17!80;UBERON:0001474!2.52e-14!86;UBERON:0004765!6.51e-14!101;UBERON:0001434!6.51e-14!101;UBERON:0002405!9.31e-13!115;UBERON:0004535!4.89e-11!110;UBERON:0001009!5.47e-10!113;UBERON:0000926!1.40e-08!448;UBERON:0004120!1.40e-08!448;UBERON:0006603!1.40e-08!448;UBERON:0000055!1.73e-08!69;UBERON:0002049!4.62e-08!79;UBERON:0007798!4.62e-08!79;UBERON:0001981!6.10e-08!60;UBERON:0007500!6.10e-08!60;UBERON:0004537!6.10e-08!60;UBERON:0006965!6.10e-08!60;UBERON:0000486!1.49e-07!82;UBERON:0001637!5.65e-07!42;UBERON:0003509!5.65e-07!42;UBERON:0004572!5.65e-07!42;UBERON:0004872!7.05e-07!84;UBERON:0004290!8.25e-07!70 | |ontology_enrichment_uberon=UBERON:0003081!1.80e-27!216;UBERON:0002193!7.83e-22!112;UBERON:0002384!3.50e-21!375;UBERON:0002390!3.75e-21!102;UBERON:0003061!3.75e-21!102;UBERON:0002204!2.60e-18!167;UBERON:0002371!5.90e-17!80;UBERON:0001474!2.52e-14!86;UBERON:0004765!6.51e-14!101;UBERON:0001434!6.51e-14!101;UBERON:0002405!9.31e-13!115;UBERON:0004535!4.89e-11!110;UBERON:0001009!5.47e-10!113;UBERON:0000926!1.40e-08!448;UBERON:0004120!1.40e-08!448;UBERON:0006603!1.40e-08!448;UBERON:0000055!1.73e-08!69;UBERON:0002049!4.62e-08!79;UBERON:0007798!4.62e-08!79;UBERON:0001981!6.10e-08!60;UBERON:0007500!6.10e-08!60;UBERON:0004537!6.10e-08!60;UBERON:0006965!6.10e-08!60;UBERON:0000486!1.49e-07!82;UBERON:0001637!5.65e-07!42;UBERON:0003509!5.65e-07!42;UBERON:0004572!5.65e-07!42;UBERON:0004872!7.05e-07!84;UBERON:0004290!8.25e-07!70 | ||
|ontology_enrichment_uberon_v019= | |||
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| ||
|short_description=p3@ARPC1B | |short_description=p3@ARPC1B | ||
}} | }} |
Latest revision as of 08:53, 20 September 2015
Short description: | p3@ARPC1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ARPC1B_5end |
Coexpression cluster: | C4710_Monocytederived_Mesenchymal_Macrophage_papillotubular_Dendritic_Alveolar_CD14CD16 |
Association with transcript: | 0bp_to_ENST00000455009, ENST00000484375, ENST00000484600, uc003upz.2_5end |
EntrezGene: | ARPC1B |
HGNC: | 704 |
UniProt: | C9J4Z7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 1.07e-26 | 203 |
hemolymphoid system | 1.25e-23 | 108 |
hematopoietic system | 4.94e-23 | 98 |
blood island | 4.94e-23 | 98 |
connective tissue | 8.14e-22 | 371 |
immune system | 1.40e-19 | 93 |
mesoderm | 3.09e-19 | 315 |
mesoderm-derived structure | 3.09e-19 | 315 |
presumptive mesoderm | 3.09e-19 | 315 |
musculoskeletal system | 4.29e-19 | 167 |
bone marrow | 7.25e-19 | 76 |
bone element | 6.35e-16 | 82 |
skeletal element | 8.00e-16 | 90 |
skeletal system | 5.27e-15 | 100 |
cardiovascular system | 5.53e-11 | 109 |
circulatory system | 6.21e-10 | 112 |
epithelial vesicle | 1.52e-08 | 78 |
vessel | 1.92e-08 | 68 |
vasculature | 5.17e-08 | 78 |
vascular system | 5.17e-08 | 78 |
epithelial tube open at both ends | 6.69e-08 | 59 |
blood vessel | 6.69e-08 | 59 |
blood vasculature | 6.69e-08 | 59 |
vascular cord | 6.69e-08 | 59 |
multilaminar epithelium | 2.23e-07 | 83 |
artery | 5.64e-07 | 42 |
arterial blood vessel | 5.64e-07 | 42 |
arterial system | 5.64e-07 | 42 |
splanchnic layer of lateral plate mesoderm | 7.94e-07 | 83 |