FFCP PHASE1:Hg19::chr5:133561733..133561744,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:133561733..133561744,- to FFCP PHASE1:Hg19::chr5:133561733..133561744,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6500 | |EntrezGene=6500 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10899 | |HGNC=10899 | ||
|TSSclassifier=strong | |||
|UniProt=E5RI56 | |UniProt=E5RI56 | ||
|association_with_transcript=17bp_to_ENST00000519718_5end | |||
|cluster_id=chr5:133561733..133561744,- | |||
|description=CAGE_peak_5_at_SKP1_5end | |||
|id=chr5:133561733..133561744,- | |||
|ontology_enrichment_celltype=CL:0000860!2.26e-13!45;CL:0002057!2.73e-13!42;CL:0000766!5.47e-11!76;CL:0000738!3.36e-10!140;CL:0000557!1.13e-09!71;CL:0002009!5.27e-09!65;CL:0000839!1.40e-08!70;CL:0002194!2.82e-08!63;CL:0000576!2.82e-08!63;CL:0000040!2.82e-08!63;CL:0000559!2.82e-08!63;CL:0002031!2.87e-08!124;CL:0002087!2.12e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.56e-13;33!CL:0002057;1.56e-13;33!CL:0000473;8.17e-09;39!CL:0000234;8.17e-09;39!CL:0000576;5.07e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.73e-13,42;CL:0002057,2.73e-13,42;CL:0000766,4.05e-11,72;CL:0000473,2.01e-10,48;CL:0000234,2.01e-10,48;CL:0000738,3.62e-10,136;CL:0000557,8.70e-10,67;CL:0002009,4.02e-09,61;CL:0000839,1.16e-08,66;CL:0002194,2.23e-08,59;CL:0000576,2.23e-08,59;CL:0000040,2.23e-08,59;CL:0000559,2.23e-08,59;CL:0002031,3.11e-08,120;CL:0002087,2.32e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;3.06e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.61e-08!80;UBERON:0001869!1.61e-07!32;UBERON:0001893!3.88e-07!34;UBERON:0004765!4.32e-07!101;UBERON:0001434!4.32e-07!101;UBERON:0001474!4.86e-07!86;UBERON:0002780!5.53e-07!41;UBERON:0001890!5.53e-07!41;UBERON:0006240!5.53e-07!41;UBERON:0002020!6.73e-07!34;UBERON:0003528!6.73e-07!34;UBERON:0000956!7.65e-07!25;UBERON:0000203!7.65e-07!25 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.20e-08,76;UBERON:0001869,1.61e-07,32;UBERON:0001893,3.88e-07,34;UBERON:0001474,4.88e-07,82;UBERON:0002780,5.53e-07,41;UBERON:0001890,5.53e-07,41;UBERON:0003080,5.53e-07,41;UBERON:0006240,5.53e-07,41;UBERON:0004765,6.52e-07,90;UBERON:0003528,6.73e-07,34;UBERON:0002020,6.73e-07,34;UBERON:0000956,7.65e-07,25;UBERON:0000203,7.65e-07,25;UBERON:0002791,9.79e-07,32 | |||
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| ||
|short_description=p5@SKP1 | |||
}} | }} |
Latest revision as of 08:46, 20 September 2015
Short description: | p5@SKP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SKP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 17bp_to_ENST00000519718_5end |
EntrezGene: | SKP1 |
HGNC: | 10899 |
UniProt: | E5RI56 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.73e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.73e-13 | 42 |
myeloid leukocyte | 4.05e-11 | 72 |
defensive cell | 2.01e-10 | 48 |
phagocyte | 2.01e-10 | 48 |
leukocyte | 3.62e-10 | 136 |
granulocyte monocyte progenitor cell | 8.70e-10 | 67 |
macrophage dendritic cell progenitor | 4.02e-09 | 61 |
myeloid lineage restricted progenitor cell | 1.16e-08 | 66 |
monopoietic cell | 2.23e-08 | 59 |
monocyte | 2.23e-08 | 59 |
monoblast | 2.23e-08 | 59 |
promonocyte | 2.23e-08 | 59 |
hematopoietic lineage restricted progenitor cell | 3.11e-08 | 120 |
nongranular leukocyte | 2.32e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.20e-08 | 76 |
cerebral hemisphere | 1.61e-07 | 32 |
telencephalon | 3.88e-07 | 34 |
bone element | 4.88e-07 | 82 |
regional part of forebrain | 5.53e-07 | 41 |
forebrain | 5.53e-07 | 41 |
anterior neural tube | 5.53e-07 | 41 |
future forebrain | 5.53e-07 | 41 |
skeletal element | 6.52e-07 | 90 |
brain grey matter | 6.73e-07 | 34 |
gray matter | 6.73e-07 | 34 |
cerebral cortex | 7.65e-07 | 25 |
pallium | 7.65e-07 | 25 |
regional part of telencephalon | 9.79e-07 | 32 |