FFCP PHASE1:Hg19::chr18:7117785..7117811,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=284217 | |EntrezGene=284217 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6481 | |HGNC=6481 | ||
|TSSclassifier=strong | |||
|UniProt=P25391 | |UniProt=P25391 | ||
|association_with_transcript=1bp_to_ENST00000389658,NM_005559,uc002knm.2,uc010wzj.1_5end | |association_with_transcript=1bp_to_ENST00000389658,NM_005559,uc002knm.2,uc010wzj.1_5end | ||
|cluster_id=chr18:7117785..7117811,- | |||
|coexpression_cluster_id=C3739 | |coexpression_cluster_id=C3739 | ||
|description=CAGE_peak_1_at_LAMA1_5end | |description=CAGE_peak_1_at_LAMA1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000055!1.47e-13!180;CL:0000147!2.27e-08!14;CL:0000133!2.01e-07!59 | |ontology_enrichment_celltype=CL:0000055!1.47e-13!180;CL:0000147!2.27e-08!14;CL:0000133!2.01e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000147;1.70e-09;14!CL:0000148;1.63e-07;10 | |ontology_enrichment_celltype_v019=CL:0000147;1.70e-09;14!CL:0000148;1.63e-07;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000147,1.24e-09,14;CL:0000148,1.24e-07,10;CL:0000541,1.24e-07,10 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!8.84e-09!14 | |ontology_enrichment_disease=DOID:2394!8.84e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;2.21e-09;14 | |ontology_enrichment_disease_v019=DOID:2394;2.21e-09;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,1.97e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0005743!1.26e-20!86;UBERON:0000073!2.70e-20!94;UBERON:0001016!2.70e-20!94;UBERON:0004121!3.14e-20!169;UBERON:0000033!5.61e-20!123;UBERON:0001017!1.66e-19!82;UBERON:0000924!2.56e-19!173;UBERON:0006601!2.56e-19!173;UBERON:0000153!2.11e-18!129;UBERON:0007811!2.11e-18!129;UBERON:0003075!8.64e-17!86;UBERON:0007284!8.64e-17!86;UBERON:0000475!8.74e-17!365;UBERON:0000955!1.29e-15!69;UBERON:0006238!1.29e-15!69;UBERON:0002346!1.66e-15!90;UBERON:0002616!2.78e-15!59;UBERON:0003056!2.98e-14!61;UBERON:0001049!4.95e-14!57;UBERON:0005068!4.95e-14!57;UBERON:0006241!4.95e-14!57;UBERON:0007135!4.95e-14!57;UBERON:0000119!6.90e-12!312;UBERON:0000481!1.55e-11!347;UBERON:0003080!4.28e-11!42;UBERON:0002780!5.28e-11!41;UBERON:0001890!5.28e-11!41;UBERON:0006240!5.28e-11!41;UBERON:0000483!6.50e-11!309;UBERON:0002020!1.88e-09!34;UBERON:0003528!1.88e-09!34;UBERON:0001893!2.44e-09!34;UBERON:0002791!3.34e-09!33;UBERON:0001869!1.19e-08!32;UBERON:0000991!2.36e-08!21;UBERON:0009196!2.36e-08!21;UBERON:0009117!2.36e-08!21;UBERON:0005564!2.36e-08!21;UBERON:0000922!3.96e-08!612;UBERON:0004176!1.41e-07!22;UBERON:0000956!7.57e-07!25;UBERON:0000203!7.57e-07!25;UBERON:0002553!7.77e-07!70 | |ontology_enrichment_uberon=UBERON:0005743!1.26e-20!86;UBERON:0000073!2.70e-20!94;UBERON:0001016!2.70e-20!94;UBERON:0004121!3.14e-20!169;UBERON:0000033!5.61e-20!123;UBERON:0001017!1.66e-19!82;UBERON:0000924!2.56e-19!173;UBERON:0006601!2.56e-19!173;UBERON:0000153!2.11e-18!129;UBERON:0007811!2.11e-18!129;UBERON:0003075!8.64e-17!86;UBERON:0007284!8.64e-17!86;UBERON:0000475!8.74e-17!365;UBERON:0000955!1.29e-15!69;UBERON:0006238!1.29e-15!69;UBERON:0002346!1.66e-15!90;UBERON:0002616!2.78e-15!59;UBERON:0003056!2.98e-14!61;UBERON:0001049!4.95e-14!57;UBERON:0005068!4.95e-14!57;UBERON:0006241!4.95e-14!57;UBERON:0007135!4.95e-14!57;UBERON:0000119!6.90e-12!312;UBERON:0000481!1.55e-11!347;UBERON:0003080!4.28e-11!42;UBERON:0002780!5.28e-11!41;UBERON:0001890!5.28e-11!41;UBERON:0006240!5.28e-11!41;UBERON:0000483!6.50e-11!309;UBERON:0002020!1.88e-09!34;UBERON:0003528!1.88e-09!34;UBERON:0001893!2.44e-09!34;UBERON:0002791!3.34e-09!33;UBERON:0001869!1.19e-08!32;UBERON:0000991!2.36e-08!21;UBERON:0009196!2.36e-08!21;UBERON:0009117!2.36e-08!21;UBERON:0005564!2.36e-08!21;UBERON:0000922!3.96e-08!612;UBERON:0004176!1.41e-07!22;UBERON:0000956!7.57e-07!25;UBERON:0000203!7.57e-07!25;UBERON:0002553!7.77e-07!70 | ||
|ontology_enrichment_uberon_v019=UBERON:0000991;2.46e-09;21!UBERON:0002780;5.85e-09;41!UBERON:0001890;5.85e-09;41!UBERON:0003528;7.03e-09;34!UBERON:0002020;7.03e-09;34!UBERON:0001017;1.08e-08;75!UBERON:0002791;1.49e-08;32!UBERON:0001869;1.76e-08;32!UBERON:0000073;1.84e-08;53!UBERON:0002616;1.84e-08;53!UBERON:0001893;2.00e-08;34!UBERON:0000955;2.36e-08;68!UBERON:0001016;1.33e-07;83!UBERON:0000956;6.05e-07;25!UBERON:0000203;6.05e-07;25!UBERON:0000992;9.59e-07;13 | |ontology_enrichment_uberon_v019=UBERON:0000991;2.46e-09;21!UBERON:0002780;5.85e-09;41!UBERON:0001890;5.85e-09;41!UBERON:0003528;7.03e-09;34!UBERON:0002020;7.03e-09;34!UBERON:0001017;1.08e-08;75!UBERON:0002791;1.49e-08;32!UBERON:0001869;1.76e-08;32!UBERON:0000073;1.84e-08;53!UBERON:0002616;1.84e-08;53!UBERON:0001893;2.00e-08;34!UBERON:0000955;2.36e-08;68!UBERON:0001016;1.33e-07;83!UBERON:0000956;6.05e-07;25!UBERON:0000203;6.05e-07;25!UBERON:0000992;9.59e-07;13 | ||
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| ||
|short_description=p1@LAMA1 | |short_description=p1@LAMA1 | ||
}} | }} |
Latest revision as of 08:14, 20 September 2015
Short description: | p1@LAMA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LAMA1_5end |
Coexpression cluster: | C3739_choriocarcinoma_large_melanoma_pancreatic_mesenchymal_Meningeal_Melanocyte |
Association with transcript: | 1bp_to_ENST00000389658, NM_005559, uc002knm.2, uc010wzj.1_5end |
EntrezGene: | LAMA1 |
HGNC: | 6481 |
UniProt: | P25391 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell | 1.24e-09 | 14 |
melanocyte | 1.24e-07 | 10 |
melanoblast | 1.24e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.97e-09 | 14 |