FFCP PHASE1:Hg19::chr11:76381054..76381072,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2615 | |EntrezGene=2615 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4161 | |HGNC=4161 | ||
|TSSclassifier=strong | |||
|UniProt=Q14392,C9JYU3 | |UniProt=Q14392,C9JYU3 | ||
|association_with_transcript=-10bp_to_ENST00000407242,ENST00000421973,NM_005512,uc001oxq.3,uc010rsf.1_5end | |association_with_transcript=-10bp_to_ENST00000407242,ENST00000421973,NM_005512,uc001oxq.3,uc010rsf.1_5end | ||
|cluster_id=chr11:76381054..76381072,- | |||
|coexpression_cluster_id=C2167 | |||
|description=CAGE_peak_5_at_LRRC32_5end | |description=CAGE_peak_5_at_LRRC32_5end | ||
|id=chr11:76381054..76381072,- | |id=chr11:76381054..76381072,- | ||
|ontology_enrichment_celltype=CL:0002334!4.32e-13!12;CL:0000057!1.18e-09!75;CL:0000055!1.19e-07!180;CL:0000115!5.79e-07!35;CL:0002570!8.91e-07!8;CL:0005020!8.99e-07!6;CL:0002138!8.99e-07!6;CL:0005022!8.99e-07!6 | |ontology_enrichment_celltype=CL:0002334!4.32e-13!12;CL:0000057!1.18e-09!75;CL:0000055!1.19e-07!180;CL:0000115!5.79e-07!35;CL:0002570!8.91e-07!8;CL:0005020!8.99e-07!6;CL:0002138!8.99e-07!6;CL:0005022!8.99e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002334;1.57e-31;12!CL:0002570;1.79e-12;8!CL:0002138;5.48e-11;6!CL:0002580;1.09e-09;3!CL:0002579;3.07e-09;3!CL:0002582;3.20e-09;3!CL:0002541;1.58e-08;3!CL:0000115;2.96e-07;36!CL:0000134;3.52e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,1.04e-31,12;CL:0002570,1.74e-12,8;CL:0005020,4.19e-11,6;CL:0002138,4.19e-11,6;CL:0005022,4.19e-11,6;CL:0002580,1.11e-09,3;CL:0002582,2.93e-09,3;CL:0002579,3.46e-09,3;CL:0002541,1.84e-08,3;CL:0000057,4.06e-08,76;CL:0000115,5.47e-08,36;CL:0002078,4.69e-07,45 | |||
|ontology_enrichment_development_v019=CL:0005022;5.48e-11;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002465!5.04e-09!10;UBERON:0007023!6.49e-09!115;UBERON:0001009!7.64e-09!113;UBERON:0002049!7.82e-09!79;UBERON:0007798!7.82e-09!79;UBERON:0004872!1.12e-08!84;UBERON:0004535!2.28e-08!110;UBERON:0001473!2.91e-08!8;UBERON:0004536!2.91e-08!8;UBERON:0006558!2.91e-08!8;UBERON:0000055!5.65e-08!69;UBERON:0004457!3.57e-07!12;UBERON:0000042!3.57e-07!12;UBERON:0003688!7.52e-07!6;UBERON:0002358!7.52e-07!6;UBERON:0003684!7.52e-07!6;UBERON:0001178!7.52e-07!6 | |ontology_enrichment_uberon=UBERON:0002465!5.04e-09!10;UBERON:0007023!6.49e-09!115;UBERON:0001009!7.64e-09!113;UBERON:0002049!7.82e-09!79;UBERON:0007798!7.82e-09!79;UBERON:0004872!1.12e-08!84;UBERON:0004535!2.28e-08!110;UBERON:0001473!2.91e-08!8;UBERON:0004536!2.91e-08!8;UBERON:0006558!2.91e-08!8;UBERON:0000055!5.65e-08!69;UBERON:0004457!3.57e-07!12;UBERON:0000042!3.57e-07!12;UBERON:0003688!7.52e-07!6;UBERON:0002358!7.52e-07!6;UBERON:0003684!7.52e-07!6;UBERON:0001178!7.52e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.49e-11;6!UBERON:0002358;1.49e-11;6!UBERON:0003684;1.49e-11;6!UBERON:0001178;1.49e-11;6!UBERON:0001013;2.26e-11;14!UBERON:0001473;2.51e-11;8!UBERON:0004536;2.51e-11;8!UBERON:0006558;2.51e-11;8!UBERON:0004457;1.23e-10;9!UBERON:0000042;1.23e-10;9!UBERON:0002465;6.54e-09;10!UBERON:0003124;1.58e-08;3!UBERON:0000920;1.58e-08;3!UBERON:0002405;1.77e-07;27!UBERON:0000310;5.56e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,1.89e-11,8;UBERON:0004536,1.89e-11,8;UBERON:0006558,1.89e-11,8;UBERON:0003688,2.50e-11,6;UBERON:0002358,2.50e-11,6;UBERON:0003684,2.50e-11,6;UBERON:0001178,2.50e-11,6;UBERON:0001013,2.72e-11,14;UBERON:0002465,5.25e-09,10;UBERON:0000920,1.84e-08,3;UBERON:0004457,1.11e-07,12;UBERON:0000042,1.11e-07,12;UBERON:0000310,4.36e-07,10 | |||
|phase1_expression=6.7221000330106,1.92690471501885,4.36958652697511,1.0007329835313,0.893922188854576,0,0,0,0.522371256399677,0,0,0.218441372130172,0.791300934685361,0.495065411840187,0.662794751455832,0,0,0,0,0.123121058076788,0,0,0,0,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767175371061182,0.361439152384566,0.50133791063589,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0.419499436209906,0.275118041940067,0.208994966536811,2.58416759169329,2.49036383880697,3.3472061276467,0.402829317109147,0,0,0.367663080345869,1.62028389576352,0.357198913136319,0,0.112611480483322,1.53316637465883,0,0,0,0,0,0.496971951695318,0.379891534993739,0.529636723252875,1.72101972449288,0,1.12135520028461,0,0.98667019366864,0.622422070799533,0.538842688278752,0.326923806226917,1.66493170409425,2.30470369792,0,0.312160076830321,0,0.149448680551801,0,0,0,0,0,0,0,0.247266929278557,0.910161361938026,1.43723628363248,0,0,0,0,0,0.600952235626387,0.113432183160021,0,0.640672166455702,0,0,0,0.257640540045629,0.18611685633159,0,0,0.252433774244115,0.460249493211497,0.161646056818812,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,2.21446636387394,1.40241773803446,0.4115740113314,2.94017422771084,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,1.29149563659404,1.29929802984966,1.85194205030644,0.951270761172991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0.897048674762886,0,0.1466765716419,1.93907573636667,10.7296933755565,0.845302752556,1.59562869950922,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,9.82461907515489,1.14861935834114,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.49076596687656,0,0.271265023699736,1.24782516918484,0.178428988797162,1.10391690523754,0.234282829985426,0.300946099727719,0,0,0.664225598535437,0,0,1.37060810223918,0,0,0,0,0.303127571446259,0,0.907170879989041,6.94701861892575,5.21770709179412,4.2099014164961,7.81648810459776,2.55853624533352,2.2519548960105,1.48418066444991,1.69630663182921,4.26148140751505,2.95657761649713,3.11552657510173,3.7187321107187,0,0,0,0.114814448164607,0,0.393373244878272,0,0,0,0,0,3.4120015221269,1.53084334748864,0.863663664408557,16.9649977959318,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0.650060246036521,0,0.193341436584244,0,0,0.137836572484531,0.107420244868274,0.145016693914229,0.340906509664404,0.801288320820636,0,0,0,0,0,1.5740617341532,0,0,0,0,0,0,0,3.16379424718726,0.953150969619124,0.255897791311334,0,0.636406495851874,0,1.2591072030832,1.92175920815238,0.706874414074119,0,0,0,0,0.487426979262569,0,1.09199929126389,0.707027159768564,2.26016233240486,0,0.66343897524122,0.876901770507525,0.578775534266688,0.655894752046633,0.202910376962704,0,0,0,0.0982490410131212,0,0,0.633322905892992,2.96365403663912,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0.47748896947538,0,0,0.994147647766298,0,0.111308705022906,0,0,1.39473591775749,0,0,0,0.246169610922139,0.622079175323615,0,0,0,0.493217028184668,0,1.11136990144637,0,0.371072392647405,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0.87754158861589,0,0,0.153900517007594,0,0,0,0,1.5950057986596,1.09917112082235,5.86338253620498,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0.884612114798832,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.290967049465258,0,0.451961481561065,0,0,0.0633107959558787,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0.279282401272254,0.458320848023367,1.43574604915363,0.599037001496973,0,0.669514372325618,0.739018197353989,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.630445658393585,1.25891011523995,0,0,0,1.42939065274673,0,0,0,0.864221491201268,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0.26446520348538,0,0,0.106787412567695,0.78602152549833,0,0.992332043623902,0,0.121792598380896,0,0,0.7520696820681,0.306345576763462,0.327872630709804,0,0,0.244052529803926,0,0,0.110929051536852,0.807253238237985,0,0,0,0,0,0,0,2.38807684618998,3.73941295755559,3.88364103051829,0,1.0062716070103,1.77962244319307,0.915360273587694,3.62954217031774,0.466311601748341,0,0.159296767163702,0,0.155262956876259,0,1.86089200190596,0,0.150257608997218,0,0,0.181848659202559,0,0.464033759878494,1.19428766609585,0,2.40376993627955,3.36749488765919,2.52369796457302,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.86203915588077,0,0,0.352675943690684,0,0.256916900385838,0,0.319267718114302,0,0,0.0691572524642179,0.645902582527404,0,0,0,0,0,1.52552838186867,0,0.1989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| ||
|short_description=p5@LRRC32 | |short_description=p5@LRRC32 | ||
}} | }} |
Latest revision as of 08:04, 20 September 2015
Short description: | p5@LRRC32 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LRRC32_5end |
Coexpression cluster: | C2167_Mesenchymal_Renal_Preadipocyte_tenocyte_Adipocyte_mesenchymal_Multipotent |
Association with transcript: | -10bp_to_ENST00000407242, ENST00000421973, NM_005512, uc001oxq.3, uc010rsf.1_5end |
EntrezGene: | LRRC32 |
HGNC: | 4161 |
UniProt: | Q14392C9JYU3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 1.04e-31 | 12 |
mesenchymal stem cell of adipose | 1.74e-12 | 8 |
lymphangioblast | 4.19e-11 | 6 |
endothelial cell of lymphatic vessel | 4.19e-11 | 6 |
vascular lymphangioblast | 4.19e-11 | 6 |
preadipocyte of the breast | 1.11e-09 | 3 |
visceral preadipocyte | 2.93e-09 | 3 |
omentum preadipocyte | 3.46e-09 | 3 |
chorionic membrane mesenchymal stem cell | 1.84e-08 | 3 |
fibroblast | 4.06e-08 | 76 |
endothelial cell | 5.47e-08 | 36 |
meso-epithelial cell | 4.69e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 1.89e-11 | 8 |
lymph vasculature | 1.89e-11 | 8 |
lymphatic part of lymphoid system | 1.89e-11 | 8 |
omentum | 2.50e-11 | 6 |
peritoneum | 2.50e-11 | 6 |
abdominal cavity | 2.50e-11 | 6 |
visceral peritoneum | 2.50e-11 | 6 |
adipose tissue | 2.72e-11 | 14 |
lymphoid system | 5.25e-09 | 10 |
egg chorion | 1.84e-08 | 3 |
cavity lining | 1.11e-07 | 12 |
serous membrane | 1.11e-07 | 12 |
breast | 4.36e-07 | 10 |