FFCP PHASE1:Hg19::chr17:40118805..40118822,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1267 | |EntrezGene=1267 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2158 | |HGNC=2158 | ||
|TSSclassifier=strong | |||
|UniProt=F8W7I0 | |UniProt=F8W7I0 | ||
|association_with_transcript=0bp_to_ENST00000310262_5end | |association_with_transcript=0bp_to_ENST00000310262_5end | ||
|cluster_id=chr17:40118805..40118822,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_CNP_5end | |description=CAGE_peak_1_at_CNP_5end | ||
|id=chr17:40118805..40118822,+ | |id=chr17:40118805..40118822,+ | ||
|ontology_enrichment_celltype=CL:0000222!4.54e-18!119;CL:0000220!2.16e-16!246;CL:0002321!9.49e-16!248;CL:0000055!3.65e-13!180;CL:0000213!2.05e-10!57;CL:0000215!2.05e-10!57;CL:0000183!9.74e-10!59;CL:0000192!4.62e-09!42;CL:0000514!4.62e-09!42;CL:0000359!4.51e-08!32;CL:0000680!5.85e-08!57;CL:0000056!5.85e-08!57;CL:0000355!5.85e-08!57;CL:0000187!5.98e-08!54;CL:0002078!8.60e-08!44;CL:0000115!4.04e-07!35;CL:0000393!8.64e-07!60;CL:0000211!8.64e-07!60 | |ontology_enrichment_celltype=CL:0000222!4.54e-18!119;CL:0000220!2.16e-16!246;CL:0002321!9.49e-16!248;CL:0000055!3.65e-13!180;CL:0000213!2.05e-10!57;CL:0000215!2.05e-10!57;CL:0000183!9.74e-10!59;CL:0000192!4.62e-09!42;CL:0000514!4.62e-09!42;CL:0000359!4.51e-08!32;CL:0000680!5.85e-08!57;CL:0000056!5.85e-08!57;CL:0000355!5.85e-08!57;CL:0000187!5.98e-08!54;CL:0002078!8.60e-08!44;CL:0000115!4.04e-07!35;CL:0000393!8.64e-07!60;CL:0000211!8.64e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0000359;9.19e-08;32!CL:0000192;8.31e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.14e-18,121;CL:0002321,4.50e-16,250;CL:0000213,9.26e-11,58;CL:0000215,9.26e-11,58;CL:0000192,5.52e-09,43;CL:0000514,5.52e-09,43;CL:0002078,3.99e-08,45;CL:0000359,4.51e-08,32;CL:0000680,6.30e-08,58;CL:0000056,6.30e-08,58;CL:0000355,6.30e-08,58;CL:0000187,6.50e-08,55;CL:0000115,1.84e-07,36;CL:0000393,8.99e-07,61;CL:0000211,8.99e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;8.31e-07;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;1.14e-14;34!UBERON:0003528;2.51e-14;34!UBERON:0002020;2.51e-14;34!UBERON:0002791;4.78e-14;32!UBERON:0001869;5.04e-14;32!UBERON:0000073;4.81e-12;53!UBERON:0002616;4.81e-12;53!UBERON:0000956;3.03e-11;25!UBERON:0000203;3.03e-11;25!UBERON:0002780;6.87e-11;41!UBERON:0001890;6.87e-11;41!UBERON:0002619;2.38e-10;22!UBERON:0001017;8.46e-10;75!UBERON:0000955;1.84e-09;68!UBERON:0001950;3.30e-09;20!UBERON:0004732;1.49e-08;13!UBERON:0001016;6.56e-08;83!UBERON:0004733;7.08e-08;12!UBERON:0002028;7.08e-08;12!UBERON:0001637;7.80e-08;42!UBERON:0003509;7.80e-08;42!UBERON:0004572;7.80e-08;42!UBERON:0004573;2.21e-07;33!UBERON:0004571;2.21e-07;33!UBERON:0000125;3.98e-07;9!UBERON:0002308;3.98e-07;9!UBERON:0002420;4.99e-07;9!UBERON:0007245;4.99e-07;9!UBERON:0010009;4.99e-07;9!UBERON:0010011;4.99e-07;9!UBERON:0000454;4.99e-07;9 | |||
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| ||
|short_description=p1@CNP | |short_description=p1@CNP | ||
}} | }} |
Latest revision as of 07:54, 20 September 2015
Short description: | p1@CNP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CNP_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000310262_5end |
EntrezGene: | CNP |
HGNC: | 2158 |
UniProt: | F8W7I0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.14e-18 | 121 |
embryonic cell | 4.50e-16 | 250 |
lining cell | 9.26e-11 | 58 |
barrier cell | 9.26e-11 | 58 |
smooth muscle cell | 5.52e-09 | 43 |
smooth muscle myoblast | 5.52e-09 | 43 |
meso-epithelial cell | 3.99e-08 | 45 |
vascular associated smooth muscle cell | 4.51e-08 | 32 |
muscle precursor cell | 6.30e-08 | 58 |
myoblast | 6.30e-08 | 58 |
multi-potent skeletal muscle stem cell | 6.30e-08 | 58 |
muscle cell | 6.50e-08 | 55 |
endothelial cell | 1.84e-07 | 36 |
electrically responsive cell | 8.99e-07 | 61 |
electrically active cell | 8.99e-07 | 61 |