FFCP PHASE1:Hg19::chr22:38713359..38713378,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1454 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2453 | |||
|TSSclassifier=strong | |||
|UniProt=P49674,Q5U045,B0QY34,B0QY35 | |||
|association_with_transcript=34bp_to_ENST00000396832,NM_152221,uc003avj.2,uc003avl.1,uc003avp.1,uc003avq.1_5end | |||
|cluster_id=chr22:38713359..38713378,- | |||
|description=CAGE_peak_4_at_CSNK1E_5end | |||
|id=chr22:38713359..38713378,- | |||
|ontology_enrichment_celltype=CL:0002321!1.92e-12!248;CL:0000220!5.13e-12!246;CL:0000221!5.96e-12!71;CL:0000133!1.12e-08!59;CL:0002077!2.52e-08!33;CL:0000066!1.97e-07!254;CL:0000055!3.20e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0002077;3.28e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.65e-12,72;CL:0002321,4.82e-12,250;CL:0002077,6.88e-09,34;CL:0000133,1.08e-08,59;CL:0000066,2.87e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.71e-11!365;UBERON:0000924!1.09e-08!173;UBERON:0006601!1.09e-08!173;UBERON:0004121!1.97e-08!169;UBERON:0000481!3.00e-08!347;UBERON:0000468!9.75e-08!659;UBERON:0000119!2.32e-07!312;UBERON:0000483!4.64e-07!309;UBERON:0000922!7.18e-07!612 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,9.07e-10,171;UBERON:0000924,9.07e-10,171;UBERON:0006601,9.07e-10,171;UBERON:0000119,8.37e-08,309;UBERON:0000922,1.26e-07,592;UBERON:0000483,1.74e-07,306 | |||
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| |||
|short_description=p4@CSNK1E | |||
}} |
Latest revision as of 07:53, 20 September 2015
Short description: | p4@CSNK1E |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CSNK1E_5end |
Coexpression cluster: | NA |
Association with transcript: | 34bp_to_ENST00000396832, NM_152221, uc003avj.2, uc003avl.1, uc003avp.1, uc003avq.1_5end |
EntrezGene: | CSNK1E |
HGNC: | 2453 |
UniProt: | P49674Q5U045B0QY34B0QY35 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.65e-12 | 72 |
embryonic cell | 4.82e-12 | 250 |
ecto-epithelial cell | 6.88e-09 | 34 |
neurectodermal cell | 1.08e-08 | 59 |
epithelial cell | 2.87e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 9.07e-10 | 171 |
ectoderm | 9.07e-10 | 171 |
presumptive ectoderm | 9.07e-10 | 171 |
cell layer | 8.37e-08 | 309 |
embryo | 1.26e-07 | 592 |
epithelium | 1.74e-07 | 306 |