FFCP PHASE1:Hg19::chr22:38713333..38713350,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1454 | |EntrezGene=1454 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2453 | |HGNC=2453 | ||
|TSSclassifier=strong | |||
|UniProt=P49674,Q5U045,B0QY34,B0QY35 | |UniProt=P49674,Q5U045,B0QY34,B0QY35 | ||
|association_with_transcript=62bp_to_ENST00000396832,NM_152221,uc003avj.2,uc003avl.1,uc003avp.1,uc003avq.1_5end | |association_with_transcript=62bp_to_ENST00000396832,NM_152221,uc003avj.2,uc003avl.1,uc003avp.1,uc003avq.1_5end | ||
|cluster_id=chr22:38713333..38713350,- | |||
|description=CAGE_peak_2_at_CSNK1E_5end | |description=CAGE_peak_2_at_CSNK1E_5end | ||
|id=chr22:38713333..38713350,- | |id=chr22:38713333..38713350,- | ||
|ontology_enrichment_celltype=CL:0002321!2.33e-14!248;CL:0000220!5.14e-14!246;CL:0000055!1.40e-13!180;CL:0000221!2.32e-10!71;CL:0002077!1.09e-09!33;CL:0000066!2.83e-09!254 | |ontology_enrichment_celltype=CL:0002321!2.33e-14!248;CL:0000220!5.14e-14!246;CL:0000055!1.40e-13!180;CL:0000221!2.32e-10!71;CL:0002077!1.09e-09!33;CL:0000066!2.83e-09!254 | ||
|ontology_enrichment_celltype_v019=CL:0002077;3.27e-09;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,8.68e-13,250;CL:0000221,2.99e-10,72;CL:0002077,5.13e-10,34;CL:0000066,6.65e-08,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!4.08e-20!365;UBERON:0000481!1.93e-18!347;UBERON:0000483!2.30e-17!309;UBERON:0000119!4.03e-17!312;UBERON:0000477!4.22e-16!286;UBERON:0000468!4.39e-14!659;UBERON:0004111!8.10e-14!241;UBERON:0000467!1.16e-12!625;UBERON:0000480!2.43e-12!626;UBERON:0000025!1.00e-11!194;UBERON:0004121!1.27e-11!169;UBERON:0000922!1.92e-11!612;UBERON:0000924!5.79e-11!173;UBERON:0006601!5.79e-11!173;UBERON:0002050!2.64e-10!605;UBERON:0005423!2.64e-10!605;UBERON:0000923!3.58e-10!604;UBERON:0005291!3.58e-10!604;UBERON:0006598!3.58e-10!604;UBERON:0002532!3.58e-10!604;UBERON:0000033!1.45e-09!123;UBERON:0000064!1.64e-09!219;UBERON:0002049!2.17e-09!79;UBERON:0007798!2.17e-09!79;UBERON:0003104!2.33e-09!238;UBERON:0009142!2.33e-09!238;UBERON:0000914!2.77e-09!83;UBERON:0002329!2.77e-09!83;UBERON:0003077!2.77e-09!83;UBERON:0003059!2.77e-09!83;UBERON:0007282!2.77e-09!83;UBERON:0009618!2.77e-09!83;UBERON:0007285!2.77e-09!83;UBERON:0004872!3.63e-09!84;UBERON:0001981!9.83e-09!60;UBERON:0007500!9.83e-09!60;UBERON:0004537!9.83e-09!60;UBERON:0006965!9.83e-09!60;UBERON:0002100!1.52e-08!216;UBERON:0000153!1.94e-08!129;UBERON:0007811!1.94e-08!129;UBERON:0001637!2.51e-08!42;UBERON:0003509!2.51e-08!42;UBERON:0004572!2.51e-08!42;UBERON:0000055!2.82e-08!69;UBERON:0003914!5.67e-08!118;UBERON:0000486!1.04e-07!82;UBERON:0005256!1.36e-07!143;UBERON:0003102!2.13e-07!95;UBERON:0001048!4.30e-07!168 | |ontology_enrichment_uberon=UBERON:0000475!4.08e-20!365;UBERON:0000481!1.93e-18!347;UBERON:0000483!2.30e-17!309;UBERON:0000119!4.03e-17!312;UBERON:0000477!4.22e-16!286;UBERON:0000468!4.39e-14!659;UBERON:0004111!8.10e-14!241;UBERON:0000467!1.16e-12!625;UBERON:0000480!2.43e-12!626;UBERON:0000025!1.00e-11!194;UBERON:0004121!1.27e-11!169;UBERON:0000922!1.92e-11!612;UBERON:0000924!5.79e-11!173;UBERON:0006601!5.79e-11!173;UBERON:0002050!2.64e-10!605;UBERON:0005423!2.64e-10!605;UBERON:0000923!3.58e-10!604;UBERON:0005291!3.58e-10!604;UBERON:0006598!3.58e-10!604;UBERON:0002532!3.58e-10!604;UBERON:0000033!1.45e-09!123;UBERON:0000064!1.64e-09!219;UBERON:0002049!2.17e-09!79;UBERON:0007798!2.17e-09!79;UBERON:0003104!2.33e-09!238;UBERON:0009142!2.33e-09!238;UBERON:0000914!2.77e-09!83;UBERON:0002329!2.77e-09!83;UBERON:0003077!2.77e-09!83;UBERON:0003059!2.77e-09!83;UBERON:0007282!2.77e-09!83;UBERON:0009618!2.77e-09!83;UBERON:0007285!2.77e-09!83;UBERON:0004872!3.63e-09!84;UBERON:0001981!9.83e-09!60;UBERON:0007500!9.83e-09!60;UBERON:0004537!9.83e-09!60;UBERON:0006965!9.83e-09!60;UBERON:0002100!1.52e-08!216;UBERON:0000153!1.94e-08!129;UBERON:0007811!1.94e-08!129;UBERON:0001637!2.51e-08!42;UBERON:0003509!2.51e-08!42;UBERON:0004572!2.51e-08!42;UBERON:0000055!2.82e-08!69;UBERON:0003914!5.67e-08!118;UBERON:0000486!1.04e-07!82;UBERON:0005256!1.36e-07!143;UBERON:0003102!2.13e-07!95;UBERON:0001048!4.30e-07!168 | ||
|ontology_enrichment_uberon_v019= | |||
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| ||
|short_description=p2@CSNK1E | |short_description=p2@CSNK1E | ||
}} | }} |
Latest revision as of 07:52, 20 September 2015
Short description: | p2@CSNK1E |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CSNK1E_5end |
Coexpression cluster: | NA |
Association with transcript: | 62bp_to_ENST00000396832, NM_152221, uc003avj.2, uc003avl.1, uc003avp.1, uc003avq.1_5end |
EntrezGene: | CSNK1E |
HGNC: | 2453 |
UniProt: | P49674Q5U045B0QY34B0QY35 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 8.68e-13 | 250 |
ectodermal cell | 2.99e-10 | 72 |
ecto-epithelial cell | 5.13e-10 | 34 |
epithelial cell | 6.65e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
epithelium | 4.94e-18 | 306 |
cell layer | 9.84e-18 | 309 |
anatomical conduit | 6.36e-15 | 240 |
tube | 1.59e-12 | 192 |
ectoderm-derived structure | 3.89e-12 | 171 |
ectoderm | 3.89e-12 | 171 |
presumptive ectoderm | 3.89e-12 | 171 |
structure with developmental contribution from neural crest | 1.29e-10 | 132 |
ecto-epithelium | 2.06e-10 | 104 |
embryo | 2.99e-10 | 592 |
splanchnic layer of lateral plate mesoderm | 2.66e-09 | 83 |
vasculature | 3.48e-09 | 78 |
vascular system | 3.48e-09 | 78 |
developing anatomical structure | 6.60e-09 | 581 |
artery | 6.91e-09 | 42 |
arterial blood vessel | 6.91e-09 | 42 |
arterial system | 6.91e-09 | 42 |
epithelial tube open at both ends | 1.19e-08 | 59 |
blood vessel | 1.19e-08 | 59 |
blood vasculature | 1.19e-08 | 59 |
vascular cord | 1.19e-08 | 59 |
surface structure | 1.33e-08 | 99 |
epithelial tube | 1.49e-08 | 117 |
vessel | 2.71e-08 | 68 |
multilaminar epithelium | 1.96e-07 | 83 |
embryonic structure | 2.92e-07 | 564 |
primordium | 6.13e-07 | 160 |
head | 8.90e-07 | 56 |