FFCP PHASE1:Hg19::chr4:108746282..108746301,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr4:108746282..108746301,+ to FFCP PHASE1:Hg19::chr4:108746282..108746301,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=166929 | |EntrezGene=166929 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28395 | |HGNC=28395 | ||
|TSSclassifier=strong | |||
|UniProt=E5RJU3 | |UniProt=E5RJU3 | ||
|association_with_transcript=-62bp_to_ENST00000503862_5end | |||
|cluster_id=chr4:108746282..108746301,+ | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_14_at_SGMS2_5end | |||
|id=chr4:108746282..108746301,+ | |||
|ontology_enrichment_celltype=CL:0000557!5.94e-19!71;CL:0000839!3.87e-18!70;CL:0002057!4.76e-18!42;CL:0000860!2.79e-16!45;CL:0000766!7.84e-16!76;CL:0002009!5.41e-15!65;CL:0002194!1.31e-14!63;CL:0000576!1.31e-14!63;CL:0000040!1.31e-14!63;CL:0000559!1.31e-14!63;CL:0000763!9.33e-09!112;CL:0000049!9.33e-09!112;CL:0002274!7.01e-08!5;CL:0000457!7.01e-08!5;CL:0002191!7.01e-08!5;CL:0000097!7.01e-08!5;CL:0000831!7.01e-08!5;CL:0002028!7.01e-08!5;CL:0002031!1.92e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.42e-52;33!CL:0002057;2.42e-52;33!CL:0000473;9.42e-33;39!CL:0000234;9.42e-33;39!CL:0000576;2.00e-22;48!CL:0000766;1.15e-17;69!CL:0000763;5.69e-09;100!CL:0002087;3.87e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.10e-42,42;CL:0002057,5.10e-42,42;CL:0000473,1.02e-36,48;CL:0000234,1.02e-36,48;CL:0000839,7.93e-32,66;CL:0000557,2.37e-31,67;CL:0002194,2.73e-29,59;CL:0000576,2.73e-29,59;CL:0000040,2.73e-29,59;CL:0000559,2.73e-29,59;CL:0000766,3.58e-29,72;CL:0002009,2.48e-28,61;CL:0000763,2.30e-19,108;CL:0000049,2.30e-19,108;CL:0002031,2.20e-17,120;CL:0000738,2.78e-15,136;CL:0002087,6.87e-15,115;CL:0002032,8.04e-13,161;CL:0000837,8.04e-13,161;CL:0000037,2.92e-12,168;CL:0000988,1.32e-11,177 | |||
|ontology_enrichment_development_v019=CL:0002057;4.21e-32;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!7.76e-19!86;UBERON:0002371!9.91e-18!80;UBERON:0004765!3.59e-14!101;UBERON:0001434!3.59e-14!101;UBERON:0002390!3.61e-14!102;UBERON:0003061!3.61e-14!102;UBERON:0002193!7.91e-12!112;UBERON:0002405!6.09e-09!115;UBERON:0002204!1.32e-08!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.24e-27,76;UBERON:0001474,1.34e-25,82;UBERON:0004765,2.65e-23,90;UBERON:0002405,1.53e-22,93;UBERON:0002390,2.24e-21,98;UBERON:0003061,2.24e-21,98;UBERON:0001434,6.08e-21,100;UBERON:0002193,2.30e-19,108;UBERON:0002204,2.44e-12,167;UBERON:0003081,4.95e-10,203 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0.485168122375632,0,1.6446715520873,0.619412741790207,0,1.0246428261164,1.41889337933151,0.344745680736619,0.645484683583826,1.35426486594342,0,0.272906150057846,0,0.918251677112708,0,1.27867425159808,0.329851300186716,0.797854630486527,0,0.580418477257168,1.13477044938228,0,2.00998932205395,0.521482918420201,1.73751075764093,1.21079900526674,1.47311054395026,0.949387162322653,0,0,0,0.336985893439485,0,0.16072558669708,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0.417989933073621,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0.286836620748814,0.354668382198357,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0.193260853163297,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0.702012795417713,0.445893486866185,0,0,0,0,0,0,35.4717531285079,0.176096868026452,0.621984346622316,0.288239906833923,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0.517086863031111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0.116210378459959,0,0,0.0920809889358963,0.34444334449382,0.546273504020151,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.206082023295445,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0.272999822815972,0.141405431953713,0,0,0,0.876901770507525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0.102268682502155,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0.296521128680622,0.494255755786011,0.313265848516366,0,0,0,0,0.19566461893209,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0.353024506766001,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0.199679000498991,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0.653174720218818,0,0,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0,0.471612915298998,0,0,0,0,0,0.544017803369474,0,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0,0,0.124980407962107,0,0,0,0,0,0.149254802886874,0,0,0.189403005275089,0.251567901752575,0,0,0,0,0,0.63718706865481,0,0.155262956876259,0.414706207840855,0.53168342911599,0,0,0,0,0.363697318405119,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.115525666150338,0.381382095467167,0,0.198916222116275,0,0,0,0,0,0.295712172434091,0,0,0,0.0634158101939068,0,0,0,0,0.127762427639595,0.535701835878287,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0.111855431797792,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0.714193294391221,0,0,0.112131862580613,0,0.202117188958219,0.217716747896961,0,0,0.143444410785353,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | |phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0.485168122375632,0,1.6446715520873,0.619412741790207,0,1.0246428261164,1.41889337933151,0.344745680736619,0.645484683583826,1.35426486594342,0,0.272906150057846,0,0.918251677112708,0,1.27867425159808,0.329851300186716,0.797854630486527,0,0.580418477257168,1.13477044938228,0,2.00998932205395,0.521482918420201,1.73751075764093,1.21079900526674,1.47311054395026,0.949387162322653,0,0,0,0.336985893439485,0,0.16072558669708,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0.417989933073621,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0.286836620748814,0.354668382198357,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0.193260853163297,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0.702012795417713,0.445893486866185,0,0,0,0,0,0,35.4717531285079,0.176096868026452,0.621984346622316,0.288239906833923,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0.517086863031111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0.116210378459959,0,0,0.0920809889358963,0.34444334449382,0.546273504020151,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.206082023295445,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0.272999822815972,0.141405431953713,0,0,0,0.876901770507525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0.102268682502155,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0.296521128680622,0.494255755786011,0.313265848516366,0,0,0,0,0.19566461893209,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0.353024506766001,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0.199679000498991,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0.653174720218818,0,0,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0,0.471612915298998,0,0,0,0,0,0.544017803369474,0,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0,0,0.124980407962107,0,0,0,0,0,0.149254802886874,0,0,0.189403005275089,0.251567901752575,0,0,0,0,0,0.63718706865481,0,0.155262956876259,0.414706207840855,0.53168342911599,0,0,0,0,0.363697318405119,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.115525666150338,0.381382095467167,0,0.198916222116275,0,0,0,0,0,0.295712172434091,0,0,0,0.0634158101939068,0,0,0,0,0.127762427639595,0.535701835878287,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0.111855431797792,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0.714193294391221,0,0,0.112131862580613,0,0.202117188958219,0.217716747896961,0,0,0.143444410785353,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | ||
|short_description=p14@SGMS2 | |||
}} | }} |
Latest revision as of 07:44, 20 September 2015
Short description: | p14@SGMS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_SGMS2_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | -62bp_to_ENST00000503862_5end |
EntrezGene: | SGMS2 |
HGNC: | 28395 |
UniProt: | E5RJU3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.10e-42 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.10e-42 | 42 |
defensive cell | 1.02e-36 | 48 |
phagocyte | 1.02e-36 | 48 |
myeloid lineage restricted progenitor cell | 7.93e-32 | 66 |
granulocyte monocyte progenitor cell | 2.37e-31 | 67 |
monopoietic cell | 2.73e-29 | 59 |
monocyte | 2.73e-29 | 59 |
monoblast | 2.73e-29 | 59 |
promonocyte | 2.73e-29 | 59 |
myeloid leukocyte | 3.58e-29 | 72 |
macrophage dendritic cell progenitor | 2.48e-28 | 61 |
myeloid cell | 2.30e-19 | 108 |
common myeloid progenitor | 2.30e-19 | 108 |
hematopoietic lineage restricted progenitor cell | 2.20e-17 | 120 |
leukocyte | 2.78e-15 | 136 |
nongranular leukocyte | 6.87e-15 | 115 |
hematopoietic oligopotent progenitor cell | 8.04e-13 | 161 |
hematopoietic multipotent progenitor cell | 8.04e-13 | 161 |
hematopoietic stem cell | 2.92e-12 | 168 |
hematopoietic cell | 1.32e-11 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.24e-27 | 76 |
bone element | 1.34e-25 | 82 |
skeletal element | 2.65e-23 | 90 |
immune system | 1.53e-22 | 93 |
hematopoietic system | 2.24e-21 | 98 |
blood island | 2.24e-21 | 98 |
skeletal system | 6.08e-21 | 100 |
hemolymphoid system | 2.30e-19 | 108 |
musculoskeletal system | 2.44e-12 | 167 |
lateral plate mesoderm | 4.95e-10 | 203 |