FFCP PHASE1:Hg19::chrX:19587421..19587439,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:19587421..19587439,- to FFCP PHASE1:Hg19::chrX:19587421..19587439,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=30011 | |EntrezGene=30011 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=13867 | |HGNC=13867 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=165bp_to_uc010nfm.2_5end | |||
|cluster_id=chrX:19587421..19587439,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_34_at_SH3KBP1_5end | |||
|id=chrX:19587421..19587439,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;2.12e-30;4!UBERON:0007284;2.12e-30;4!UBERON:0010226;6.22e-15;1!UBERON:0010227;8.74e-15;1!UBERON:0004140;2.25e-14;1!UBERON:0008814;4.85e-08;2!UBERON:0010056;4.85e-08;2!UBERON:0003104;8.99e-07;31 | |||
|ontology_enrichment_disease=DOID:114!3.18e-16!2;DOID:178!6.65e-09!1;DOID:326!6.65e-09!1;DOID:3978!6.65e-09!1;DOID:3394!6.65e-09!1;DOID:5844!6.65e-09!1;DOID:1287!1.48e-08!4 | |||
|ontology_enrichment_disease_v019=DOID:114;2.92e-27;2!DOID:178;2.25e-14;1!DOID:326;2.25e-14;1!DOID:3978;2.25e-14;1!DOID:3394;2.25e-14;1!DOID:5844;2.25e-14;1!DOID:1287;3.73e-14;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.39e-27,2;DOID:178,1.84e-14,1;DOID:326,1.84e-14,1;DOID:3978,1.84e-14,1;DOID:3394,1.84e-14,1;DOID:5844,1.84e-14,1;DOID:1287,3.37e-14,4 | |||
|ontology_enrichment_uberon=UBERON:0004151!1.15e-23!3;UBERON:0003978!1.68e-23!3;UBERON:0009751!1.68e-23!3;UBERON:0000946!1.68e-23!3;UBERON:0002523!1.68e-23!3;UBERON:0005983!1.68e-23!3;UBERON:0002165!1.68e-23!3;UBERON:0002062!1.68e-23!3;UBERON:0007280!1.68e-23!3;UBERON:0007100!1.51e-21!27;UBERON:0002081!3.18e-16!2;UBERON:0000341!4.31e-16!2;UBERON:0002133!4.31e-16!2;UBERON:0003103!1.03e-13!69;UBERON:0001723!4.66e-11!3;UBERON:0001033!4.66e-11!3;UBERON:0010056!4.66e-11!3;UBERON:0000948!5.28e-11!24;UBERON:0005498!5.28e-11!24;UBERON:0004140!5.28e-11!24;UBERON:0009881!5.28e-11!24;UBERON:0004141!5.28e-11!24;UBERON:0003084!5.28e-11!24;UBERON:0007005!5.28e-11!24;UBERON:0004139!5.28e-11!24;UBERON:0004291!5.28e-11!24;UBERON:0007023!2.75e-10!115;UBERON:0002084!3.31e-09!1;UBERON:0002082!3.31e-09!1;UBERON:0004706!3.31e-09!1;UBERON:0002146!3.58e-09!1;UBERON:0005623!3.58e-09!1;UBERON:0002079!4.19e-09!1;UBERON:0002135!5.70e-09!1;UBERON:0002134!7.75e-09!1;UBERON:0005208!7.75e-09!1;UBERON:0005946!7.75e-09!1;UBERON:0005965!7.75e-09!1;UBERON:0002078!7.75e-09!1;UBERON:0000989!9.74e-09!1;UBERON:0008811!9.74e-09!1;UBERON:0006258!9.74e-09!1;UBERON:0005876!9.74e-09!1;UBERON:0004874!9.74e-09!1;UBERON:0002426!1.05e-08!1;UBERON:0003831!1.05e-08!1;UBERON:0003898!1.05e-08!1;UBERON:0004830!1.05e-08!1;UBERON:0001774!1.05e-08!1;UBERON:0003830!1.05e-08!1;UBERON:0005175!1.05e-08!1;UBERON:0003897!1.05e-08!1;UBERON:0001103!1.05e-08!1;UBERON:0010084!1.05e-08!1;UBERON:0002372!1.32e-08!1;UBERON:0001961!1.32e-08!1;UBERON:0001744!1.32e-08!1;UBERON:0001735!1.32e-08!1;UBERON:0001042!2.94e-07!10;UBERON:0009145!2.94e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;6.13e-42;25!UBERON:0004151;1.95e-40;3!UBERON:0003978;2.93e-40;3!UBERON:0000946;2.93e-40;3!UBERON:0002081;2.39e-27;2!UBERON:0002133;3.57e-27;2!UBERON:0000948;1.89e-21;22!UBERON:0001723;1.36e-18;3!UBERON:0001033;1.36e-18;3!UBERON:0002084;6.22e-15;1!UBERON:0002146;6.22e-15;1!UBERON:0002082;6.22e-15;1!UBERON:0005623;6.22e-15;1!UBERON:0002079;8.74e-15;1!UBERON:0002135;1.31e-14;1!UBERON:0002134;2.25e-14;1!UBERON:0005208;2.25e-14;1!UBERON:0004145;2.25e-14;1!UBERON:0005946;2.25e-14;1!UBERON:0005965;2.25e-14;1!UBERON:0002078;2.25e-14;1!UBERON:0010313;1.43e-12;10!UBERON:0003103;1.57e-09;61!UBERON:0000341;3.56e-08;2!UBERON:0003127;7.78e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,1.71e-40,3;UBERON:0003978,3.35e-40,3;UBERON:0009751,3.35e-40,3;UBERON:0000946,3.35e-40,3;UBERON:0002523,3.35e-40,3;UBERON:0005983,3.35e-40,3;UBERON:0002165,3.35e-40,3;UBERON:0002062,3.35e-40,3;UBERON:0007280,3.35e-40,3;UBERON:0007100,8.30e-39,27;UBERON:0002081,2.39e-27,2;UBERON:0010227,2.39e-27,2;UBERON:0002133,4.09e-27,2;UBERON:0003103,1.16e-26,68;UBERON:0000948,1.16e-19,24;UBERON:0005498,1.16e-19,24;UBERON:0004140,1.16e-19,24;UBERON:0009881,1.16e-19,24;UBERON:0004141,1.16e-19,24;UBERON:0003084,1.16e-19,24;UBERON:0007005,1.16e-19,24;UBERON:0004139,1.16e-19,24;UBERON:0004291,1.16e-19,24;UBERON:0001723,1.77e-18,3;UBERON:0001033,1.77e-18,3;UBERON:0010056,1.77e-18,3;UBERON:0004797,1.17e-17,7;UBERON:0002084,5.42e-15,1;UBERON:0002082,5.42e-15,1;UBERON:0010226,5.42e-15,1;UBERON:0002146,6.22e-15,1;UBERON:0005623,6.22e-15,1;UBERON:0002079,8.17e-15,1;UBERON:0002135,1.41e-14,1;UBERON:0002134,2.41e-14,1;UBERON:0005208,2.41e-14,1;UBERON:0005946,2.41e-14,1;UBERON:0005965,2.41e-14,1;UBERON:0002078,2.41e-14,1;UBERON:0007023,6.37e-13,114;UBERON:0010313,1.49e-12,10;UBERON:0002342,1.49e-12,10;UBERON:0005062,1.49e-12,10;UBERON:0001009,1.16e-08,112;UBERON:0000341,3.56e-08,2;UBERON:0003127,6.58e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23425921017803,5.95817102430378,1.43574604915363,1.59743200399193,3.43380838509257,5.57928643604681,1.47803639470798,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.2881719582402,5.95882773328889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25858175083743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.52935927603924,0.23806443146374,0,0,0,0,0,4.13661821004227,1.02669990325584,0.336760265072938,0,1.99596213927608,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23425921017803,5.95817102430378,1.43574604915363,1.59743200399193,3.43380838509257,5.57928643604681,1.47803639470798,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.2881719582402,5.95882773328889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25858175083743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.52935927603924,0.23806443146374,0,0,0,0,0,4.13661821004227,1.02669990325584,0.336760265072938,0,1.99596213927608,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p34@SH3KBP1 | |||
}} | }} |
Latest revision as of 07:44, 20 September 2015
Short description: | p34@SH3KBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_34_at_SH3KBP1_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 165bp_to_uc010nfm.2_5end |
EntrezGene: | SH3KBP1 |
HGNC: | 13867 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 2.39e-27 | 2 |
vascular disease | 1.84e-14 | 1 |
ischemia | 1.84e-14 | 1 |
extrinsic cardiomyopathy | 1.84e-14 | 1 |
myocardial ischemia | 1.84e-14 | 1 |
myocardial infarction | 1.84e-14 | 1 |
cardiovascular system disease | 3.37e-14 | 4 |