FFCP PHASE1:Hg19::chr16:12059021..12059048,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=608 | |EntrezGene=608 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11913 | |HGNC=11913 | ||
|TSSclassifier=strong | |||
|UniProt=Q2TQ40 | |UniProt=Q2TQ40 | ||
|association_with_transcript=-31bp_to_ENST00000396495_5end | |association_with_transcript=-31bp_to_ENST00000396495_5end | ||
|cluster_id=chr16:12059021..12059048,+ | |||
|coexpression_cluster_id=C1196 | |||
|description=CAGE_peak_2_at_TNFRSF17_5end | |description=CAGE_peak_2_at_TNFRSF17_5end | ||
|id=chr16:12059021..12059048,+ | |id=chr16:12059021..12059048,+ | ||
|ontology_enrichment_celltype=CL:0000945!4.90e-66!24;CL:0000826!4.90e-66!24;CL:0000236!1.71e-36!14;CL:0000542!7.80e-29!53;CL:0000051!7.80e-29!53;CL:0000838!7.21e-27!52;CL:0002087!3.13e-13!119;CL:0000738!3.24e-13!140;CL:0002031!2.71e-11!124;CL:0000784!9.14e-10!3;CL:0000037!2.47e-09!172;CL:0000566!2.47e-09!172;CL:0000988!2.04e-08!182;CL:0002032!2.28e-08!165;CL:0000837!2.28e-08!165;CL:0000785!1.85e-07!2;CL:0000955!1.85e-07!2;CL:0000818!1.85e-07!2;CL:0000954!1.85e-07!2;CL:0000816!1.85e-07!2 | |ontology_enrichment_celltype=CL:0000945!4.90e-66!24;CL:0000826!4.90e-66!24;CL:0000236!1.71e-36!14;CL:0000542!7.80e-29!53;CL:0000051!7.80e-29!53;CL:0000838!7.21e-27!52;CL:0002087!3.13e-13!119;CL:0000738!3.24e-13!140;CL:0002031!2.71e-11!124;CL:0000784!9.14e-10!3;CL:0000037!2.47e-09!172;CL:0000566!2.47e-09!172;CL:0000988!2.04e-08!182;CL:0002032!2.28e-08!165;CL:0000837!2.28e-08!165;CL:0000785!1.85e-07!2;CL:0000955!1.85e-07!2;CL:0000818!1.85e-07!2;CL:0000954!1.85e-07!2;CL:0000816!1.85e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000945;2.33e-114;24!CL:0000236;1.52e-57;13!CL:0000542;4.81e-32;53!CL:0000784;7.61e-16;3!CL:0002087;1.05e-07;104!CL:0000946;8.49e-07;1!CL:0000786;8.49e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.05e-114,24;CL:0000826,2.05e-114,24;CL:0000236,9.95e-63,14;CL:0000542,1.20e-53,53;CL:0000051,1.20e-53,53;CL:0000838,4.34e-50,52;CL:0002087,1.17e-23,115;CL:0000738,7.31e-23,136;CL:0002031,1.91e-20,120;CL:0000037,1.95e-17,168;CL:0000988,2.92e-16,177;CL:0000784,8.67e-16,3;CL:0002032,2.17e-15,161;CL:0000837,2.17e-15,161;CL:0000785,8.51e-12,2;CL:0000955,8.51e-12,2;CL:0000818,8.51e-12,2;CL:0000954,8.51e-12,2;CL:0000816,8.51e-12,2;CL:0000817,3.82e-08,3;CL:0000946,8.97e-07,1;CL:0000786,8.97e-07,1;CL:0000980,8.97e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000051;4.81e-32;53!CL:0000954;8.28e-12;2!UBERON:0004872;2.76e-07;7 | |||
|ontology_enrichment_disease=DOID:0060058!5.18e-11!10 | |ontology_enrichment_disease=DOID:0060058!5.18e-11!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;7.93e-19;10!DOID:4960;6.25e-07;1!DOID:0070004;6.25e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,8.72e-19,10;DOID:4960,6.43e-07,1;DOID:0070004,6.43e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.13e-15!115;UBERON:0004177!3.38e-10!7;UBERON:0002106!8.87e-10!3;UBERON:0004854!8.87e-10!3;UBERON:0009034!8.87e-10!3;UBERON:0002095!8.87e-10!3;UBERON:0004782!8.87e-10!3;UBERON:0003281!8.87e-10!3;UBERON:0009664!8.87e-10!3;UBERON:0002296!8.87e-10!3;UBERON:0005602!8.87e-10!3;UBERON:0001179!8.87e-10!3;UBERON:0006293!8.87e-10!3;UBERON:0003408!8.37e-07!10;UBERON:0001829!8.74e-07!2 | |ontology_enrichment_uberon=UBERON:0007023!1.13e-15!115;UBERON:0004177!3.38e-10!7;UBERON:0002106!8.87e-10!3;UBERON:0004854!8.87e-10!3;UBERON:0009034!8.87e-10!3;UBERON:0002095!8.87e-10!3;UBERON:0004782!8.87e-10!3;UBERON:0003281!8.87e-10!3;UBERON:0009664!8.87e-10!3;UBERON:0002296!8.87e-10!3;UBERON:0005602!8.87e-10!3;UBERON:0001179!8.87e-10!3;UBERON:0006293!8.87e-10!3;UBERON:0003408!8.37e-07!10;UBERON:0001829!8.74e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;4.32e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,4.72e-08,3;UBERON:0004854,4.72e-08,3;UBERON:0009034,4.72e-08,3;UBERON:0002095,4.72e-08,3;UBERON:0004782,4.72e-08,3;UBERON:0003281,4.72e-08,3;UBERON:0009664,4.72e-08,3;UBERON:0002296,4.72e-08,3;UBERON:0005602,4.72e-08,3;UBERON:0001179,4.72e-08,3;UBERON:0006293,4.72e-08,3 | |||
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| ||
|short_description=p2@TNFRSF17 | |short_description=p2@TNFRSF17 | ||
}} | }} |
Latest revision as of 07:43, 20 September 2015
Short description: | p2@TNFRSF17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TNFRSF17_5end |
Coexpression cluster: | C1196_lymphoma_CD19_diffuse_lymphangiectasia_B_xeroderma_b |
Association with transcript: | -31bp_to_ENST00000396495_5end |
EntrezGene: | TNFRSF17 |
HGNC: | 11913 |
UniProt: | Q2TQ40 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.05e-114 | 24 |
pro-B cell | 2.05e-114 | 24 |
B cell | 9.95e-63 | 14 |
lymphocyte | 1.20e-53 | 53 |
common lymphoid progenitor | 1.20e-53 | 53 |
lymphoid lineage restricted progenitor cell | 4.34e-50 | 52 |
nongranular leukocyte | 1.17e-23 | 115 |
leukocyte | 7.31e-23 | 136 |
hematopoietic lineage restricted progenitor cell | 1.91e-20 | 120 |
hematopoietic stem cell | 1.95e-17 | 168 |
hematopoietic cell | 2.92e-16 | 177 |
plasmacytoid dendritic cell | 8.67e-16 | 3 |
hematopoietic oligopotent progenitor cell | 2.17e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.17e-15 | 161 |
mature B cell | 8.51e-12 | 2 |
pre-B-II cell | 8.51e-12 | 2 |
transitional stage B cell | 8.51e-12 | 2 |
small pre-B-II cell | 8.51e-12 | 2 |
immature B cell | 8.51e-12 | 2 |
precursor B cell | 3.82e-08 | 3 |
antibody secreting cell | 8.97e-07 | 1 |
plasma cell | 8.97e-07 | 1 |
plasmablast | 8.97e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
spleen | 4.72e-08 | 3 |
gastrointestinal system mesentery | 4.72e-08 | 3 |
stomach region | 4.72e-08 | 3 |
mesentery | 4.72e-08 | 3 |
gastrointestinal system serosa | 4.72e-08 | 3 |
mesentery of stomach | 4.72e-08 | 3 |
gut mesentery | 4.72e-08 | 3 |
dorsal mesentery | 4.72e-08 | 3 |
dorsal mesogastrium | 4.72e-08 | 3 |
peritoneal cavity | 4.72e-08 | 3 |
spleen primordium | 4.72e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 8.72e-19 | 10 |
bone marrow cancer | 6.43e-07 | 1 |
myeloma | 6.43e-07 | 1 |