FFCP PHASE1:Hg19::chr16:12058994..12059003,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=608 | |EntrezGene=608 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11913 | |HGNC=11913 | ||
|TSSclassifier=strong | |||
|UniProt=Q02223,E7EQ20 | |UniProt=Q02223,E7EQ20 | ||
|association_with_transcript=30bp_to_ENST00000053243,ENST00000435355,NM_001192,uc002dbv.2,uc010buy.2,uc010buz.2_5end | |association_with_transcript=30bp_to_ENST00000053243,ENST00000435355,NM_001192,uc002dbv.2,uc010buy.2,uc010buz.2_5end | ||
|cluster_id=chr16:12058994..12059003,+ | |||
|coexpression_cluster_id=C1196 | |coexpression_cluster_id=C1196 | ||
|description=CAGE_peak_4_at_TNFRSF17_5end | |description=CAGE_peak_4_at_TNFRSF17_5end | ||
|id=chr16:12058994..12059003,+ | |id=chr16:12058994..12059003,+ | ||
|ontology_enrichment_celltype=CL:0000945!6.58e-74!24;CL:0000826!6.58e-74!24;CL:0000236!1.31e-38!14;CL:0000542!3.82e-34!53;CL:0000051!3.82e-34!53;CL:0000838!1.81e-31!52;CL:0002087!3.21e-18!119;CL:0000738!4.42e-16!140;CL:0002031!3.36e-14!124;CL:0000037!5.40e-12!172;CL:0000566!5.40e-12!172;CL:0000988!5.15e-11!182;CL:0002032!1.85e-10!165;CL:0000837!1.85e-10!165;CL:0000785!3.07e-10!2;CL:0000955!3.07e-10!2;CL:0000818!3.07e-10!2;CL:0000954!3.07e-10!2;CL:0000816!3.07e-10!2;CL:0000817!4.30e-07!3;CL:0000784!6.17e-07!3 | |ontology_enrichment_celltype=CL:0000945!6.58e-74!24;CL:0000826!6.58e-74!24;CL:0000236!1.31e-38!14;CL:0000542!3.82e-34!53;CL:0000051!3.82e-34!53;CL:0000838!1.81e-31!52;CL:0002087!3.21e-18!119;CL:0000738!4.42e-16!140;CL:0002031!3.36e-14!124;CL:0000037!5.40e-12!172;CL:0000566!5.40e-12!172;CL:0000988!5.15e-11!182;CL:0002032!1.85e-10!165;CL:0000837!1.85e-10!165;CL:0000785!3.07e-10!2;CL:0000955!3.07e-10!2;CL:0000818!3.07e-10!2;CL:0000954!3.07e-10!2;CL:0000816!3.07e-10!2;CL:0000817!4.30e-07!3;CL:0000784!6.17e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000945;3.33e-114;24!CL:0000236;3.46e-42;13!CL:0000542;3.76e-32;53!CL:0000946;4.85e-10;1!CL:0000786;4.85e-10;1!CL:0002087;2.14e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.02e-114,24;CL:0000826,3.02e-114,24;CL:0000542,4.17e-56,53;CL:0000051,4.17e-56,53;CL:0000838,2.85e-51,52;CL:0000236,1.96e-49,14;CL:0002087,5.02e-24,115;CL:0000738,3.24e-22,136;CL:0002031,2.20e-20,120;CL:0000037,2.09e-17,168;CL:0000988,2.30e-16,177;CL:0002032,2.52e-16,161;CL:0000837,2.52e-16,161;CL:0000946,4.85e-10,1;CL:0000786,4.85e-10,1;CL:0000980,4.85e-10,1 | |||
|ontology_enrichment_development_v019=CL:0000051;3.76e-32;53 | |||
|ontology_enrichment_disease=DOID:0060058!1.89e-11!10 | |ontology_enrichment_disease=DOID:0060058!1.89e-11!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;5.03e-14;10!DOID:630;6.61e-10;1!DOID:0050177;6.61e-10;1!DOID:4960;6.61e-10;1!DOID:0070004;6.61e-10;1!DOID:0050427;6.61e-10;1!DOID:12603;9.40e-10;1!DOID:2355;9.40e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,5.29e-14,10;DOID:630,6.33e-10,1;DOID:0050177,6.33e-10,1;DOID:0050427,6.33e-10,1;DOID:4960,6.91e-10,1;DOID:0070004,6.91e-10,1;DOID:2355,7.55e-10,1;DOID:12603,8.24e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!2.78e-15!7;UBERON:0002106!7.64e-14!3;UBERON:0004854!7.64e-14!3;UBERON:0009034!7.64e-14!3;UBERON:0002095!7.64e-14!3;UBERON:0004782!7.64e-14!3;UBERON:0003281!7.64e-14!3;UBERON:0009664!7.64e-14!3;UBERON:0002296!7.64e-14!3;UBERON:0005602!7.64e-14!3;UBERON:0001179!7.64e-14!3;UBERON:0006293!7.64e-14!3;UBERON:0003408!4.22e-07!10 | |ontology_enrichment_uberon=UBERON:0004177!2.78e-15!7;UBERON:0002106!7.64e-14!3;UBERON:0004854!7.64e-14!3;UBERON:0009034!7.64e-14!3;UBERON:0002095!7.64e-14!3;UBERON:0004782!7.64e-14!3;UBERON:0003281!7.64e-14!3;UBERON:0009664!7.64e-14!3;UBERON:0002296!7.64e-14!3;UBERON:0005602!7.64e-14!3;UBERON:0001179!7.64e-14!3;UBERON:0006293!7.64e-14!3;UBERON:0003408!4.22e-07!10 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p4@TNFRSF17 | |short_description=p4@TNFRSF17 | ||
}} | }} |
Latest revision as of 07:42, 20 September 2015
Short description: | p4@TNFRSF17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TNFRSF17_5end |
Coexpression cluster: | C1196_lymphoma_CD19_diffuse_lymphangiectasia_B_xeroderma_b |
Association with transcript: | 30bp_to_ENST00000053243, ENST00000435355, NM_001192, uc002dbv.2, uc010buy.2, uc010buz.2_5end |
EntrezGene: | TNFRSF17 |
HGNC: | 11913 |
UniProt: | Q02223E7EQ20 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.02e-114 | 24 |
pro-B cell | 3.02e-114 | 24 |
lymphocyte | 4.17e-56 | 53 |
common lymphoid progenitor | 4.17e-56 | 53 |
lymphoid lineage restricted progenitor cell | 2.85e-51 | 52 |
B cell | 1.96e-49 | 14 |
nongranular leukocyte | 5.02e-24 | 115 |
leukocyte | 3.24e-22 | 136 |
hematopoietic lineage restricted progenitor cell | 2.20e-20 | 120 |
hematopoietic stem cell | 2.09e-17 | 168 |
hematopoietic cell | 2.30e-16 | 177 |
hematopoietic oligopotent progenitor cell | 2.52e-16 | 161 |
hematopoietic multipotent progenitor cell | 2.52e-16 | 161 |
antibody secreting cell | 4.85e-10 | 1 |
plasma cell | 4.85e-10 | 1 |
plasmablast | 4.85e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 5.29e-14 | 10 |
genetic disease | 6.33e-10 | 1 |
monogenic disease | 6.33e-10 | 1 |
xeroderma pigmentosum | 6.33e-10 | 1 |
bone marrow cancer | 6.91e-10 | 1 |
myeloma | 6.91e-10 | 1 |
anemia | 7.55e-10 | 1 |
acute leukemia | 8.24e-10 | 1 |